prot_L-elsbetiae_contig1822.5263.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1822.5263.1
Unique Nameprot_L-elsbetiae_contig1822.5263.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1278
Homology
BLAST of mRNA_L-elsbetiae_contig1822.5263.1 vs. uniprot
Match: D8LQ96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ96_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 8.190e-93
Identity = 365/1051 (34.73%), Postives = 480/1051 (45.67%), Query Frame = 0
Query:  244 GVGDRVSLSGFARRGESNDGEGDNGRDGXXXXXXXXXXXXRAGTSARSSDEPL-SGGTGETFSVVSEVSSGGLPPPPLLPSGPLPAIGVIREYFLTGQQQNHLDHERQLTADHMRRLNQVLAGHLSYLEVSKVHADRENL----LAAAPSHGSAVGYSSSIDDVEDAKGASRQASPRQAILRRLVVRVARERTRQGLSKAWFRMWRYSTW--------VAARSATVAKP-VVPRPVDTARKQVKGTRDPTAVEDELPWP---------TTACASDRR-----QQGIR---------IVGRVYQNRRRRAVFRGWSRLCLHAASLSAAEGASAAATAVARAARAEAMEKEAGAAXXXXXXXXXXXXXXXXXXXXXEKAQR-------------------------------EAARGSVLTAELHQNKEDMEQVVRQQQLRRMKTLITRVRGERDRALLFRGWSRLCLHAASACAAEGASAAATTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQATSRRSMLETELTLKIT-------------------RVCGERDRFRMFRGWSRLCLHAASLSAAEGASAXXXXXXXXXRAEAMQLEAVAAAEKIKALKT--EAPTSANGAAEVGEPLEQALTTERWRRAGMLIGRVCATRDRSLMFRGWSRVCLHAASLSAAEGASAAATAIARAARAEAMEKEAEAATDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDTDQLMREQQLRRMKMLIARVCGERDRALMFRGWSRLFLHAASLSAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREAARGSVLTAELHQSKEEMKQVVRQQQLRRMKMLITRVCGERDRALLFRGWSRVCLHAASLSAAEGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETDRRVILAAKA---------------------------------------------------KGRQED-----------ISRLCKERDMRLLFRGWTRLCLHAASLNAVDAMTAT 1143
            G+GD  S SGF+R GE   GE ++  +G                 + S  E + S G GE+ S+VSEVSSGGLP PPL+PSGPLPAIGVIREYFLTGQQQ+ LDHER+LT+DHMRRLNQVLAGHLSYLEVS +HA+RE L    LA+APSHG+AVGYS+S++D ++A G  R  S RQ ILRRL+ RV R+R ++ + + W R+   ++         VA  +   A+P V+ +  + A + V+       V  E+            +   A   R     + G R         ++ RV + R R ++F GW+RL LHAA+LS AEGA+AAA  +A +AR  AME+E GAA                     E+ +R                               E A GS L A+L    + +EQ V++ QLRR+K L               G S     AA+  AA    + A                                R+ T+R S    +L  KIT                   RVCG+RDR  +FR WSRLCLHAAS+ A +  SA         +A+A++ +A   AE+ K  +   E    A    +  E  E+A+  +R ++   ++ RV   R+R L+FR W R+C HAASL+A EGASAAAT   RAAR EA E    AA                                          E + +  +E +  R    + RV  ++DR L+FRGWSRL LHAASL+AA+     XXXXXXXXXXXXXXXXXXXXXXX           R  V  AE            R Q+ RR   +I     + +R LLF GWSR+C  A S+  AEG+S                                        +R   A KA                                                   + R+E+           ISR+ K++D RLLFRGW+RLCLHAASLNA DA++AT
Sbjct:    4 GIGDAASFSGFSRGGERFGGETESRGNGSDYGSRGGGIHTNGDDLSVSGSETVRSSGLGESASIVSEVSSGGLPAPPLIPSGPLPAIGVIREYFLTGQQQHDLDHERRLTSDHMRRLNQVLAGHLSYLEVSNIHAEREKLQLQALASAPSHGAAVGYSASLNDSKNASGTPRGGSLRQNILRRLMGRVCRDRAKRLIFRGWSRLCLAASLSTAEGTSAVATAAVRAARPEVMEKEAEEATETVENPSRAANVSAEVAIAREHAQREAASVLAAEHHRTIKDTEDGAREHQLRRTKMLITRVCRERDRASMFCGWNRLYLHAATLSTAEGAAAAAV-MADSARGRAMEEETGAAAGSTALVETPGKVPREWEHRLERMKRLGASAAATXXXXXXXXXXAQKEAEAAAASPRETAFGSKLMADLELKVKKIEQTVQEHQLRRVKGL---------------GAS-----AATTSAARATRSTAMEMETEEATDKTEVSRRAEDEIENVAAAREQARRETARGSNSVAKLQHKITDMEAILREHQLRWIKILITRVCGDRDRRSLFRSWSRLCLHAASVGAIDDVSAAAAEAARVAKADAVEKQAPTPAERAKVSEKGHEDSMVAADLEKRAEEAEKAVDEQRRQQTVRMVARVLRDRNRRLLFRSWGRLCSHAASLNAVEGASAAATPAVRAARVEAKEMRTAAAASSTDAIEAKSST-----------------------------ERSREEEQEPKRLRATTTMLRVSKDKDRRLLFRGWSRLCLHAASLNAADAVSATXXXXXXXXXXXXXXXXXXXXXXXAGIETDAA-VVRQRVAAAESE---------ARDQRERRALHMICSAGRDYNRRLLFHGWSRLCRQATSVHIAEGSSTAAEAIARPDVMEKPTHSPAEHAKASEKVDGDSVMATTLVKRAQEAEKAVDNQKRQLAARLGASTAATPAARAARVEVQEKETAAAASSTDAVEAEGSTERRREEEQGLQRHRALTTISRVSKDKDRRLLFRGWSRLCLHAASLNAADAVSAT 994          
BLAST of mRNA_L-elsbetiae_contig1822.5263.1 vs. uniprot
Match: A0A6H5KKN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN4_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 9.120e-38
Identity = 184/402 (45.77%), Postives = 219/402 (54.48%), Query Frame = 0
Query:  702 LTLKITRVCGERDRFRMFRGWSRLCLHAASLSAAEGASAXXXXXXXXXRAEAMQLEAVAAAEKIKA-----------------LKTEAPTSANGAAEVG---EPLEQALTTERWRRAGMLI-GRVCATRDRSLM-FRGWSRVCLHAASLSAAEGASAAATAIARAARAEAMEKEAEAATDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDTDQLMREQQLRRMKMLIAR--VCGERD------------RALMFRGWSRLFLHAASLSAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREAARG---------------SVLTAELHQSKEEMKQVVRQQQLRRMKMLITRVCGERDRALLFRGWSRVCLHAASLSAAEGAS 1052
            L +KI+RVCGE DR  +FRGWSRLCLHAASLSAAEGASA  XXXXXXX AEAM+ EA AAA+                     ++ EA   +  AAE+       E+A+   +  R  ML+ G    T    ++ FRGWSR+CLHAASLSAAEGASA               KE       XXXXXXXXXXXXXXXXXXXX                   +DTD+++R+ QLRR+KML  +    GE +            RALMFRGWSRL LHAASLSAAE                           XXXXXXXX                     S LT  L Q   + +++ R+ QL R+KML+ RVC E+DRAL+FRGWSR+CLHAASLSAAEGA+
Sbjct: 2259 LPIKISRVCGESDRALIFRGWSRLCLHAASLSAAEGASAAAXXXXXXXXAEAMEKEAKAAADXXXXXXXXXXXXXXXXXXXXXVQREAARGSELAAELQLKVNDTEEAVRDRQLHRLKMLVRGNPSGTTACGVLKFRGWSRLCLHAASLSAAEGASAXXXXXXXXXXXXXXXKEXXXXXXXXXXXXXXXXXXXXXXXXXXXAQRETSRSSELASELQPKVKDTDEVVRKHQLRRIKMLRDKHTAGGEPNTLPEAMNRYRVSRALMFRGWSRLCLHAASLSAAEGGAAAATAAARAARAEAMEKEAKAAADXXXXXXXXXXXXXXXXXXXXXXXXGTHEVSALTTALKQKDMDTEKMAREHQLHRLKMLVVRVCHEKDRALIFRGWSRLCLHAASLSAAEGAA 2660          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1822.5263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ96_ECTSI8.190e-9334.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKN4_9PHAE9.120e-3845.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 569..589
NoneNo IPR availableCOILSCoilCoilcoord: 660..701
NoneNo IPR availableCOILSCoilCoilcoord: 1064..1084
NoneNo IPR availableCOILSCoilCoilcoord: 847..867
NoneNo IPR availableCOILSCoilCoilcoord: 1173..1221
NoneNo IPR availableCOILSCoilCoilcoord: 751..771
NoneNo IPR availableCOILSCoilCoilcoord: 958..987

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1822contigL-elsbetiae_contig1822:1191..7466 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1822.5263.1mRNA_L-elsbetiae_contig1822.5263.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1822 1191..21144 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1822.5263.1 ID=prot_L-elsbetiae_contig1822.5263.1|Name=mRNA_L-elsbetiae_contig1822.5263.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1278bp
MDPDVMDPDSLSSPEHGGGTSSTRERGPGFGSMLSFSIQGPADHASSQRS
SSAALDSFDLSPATDASTGGGGFMGRGSRHQRASLSLHEAGELTQLGQSH
RSSGLLSPEDEEESTENGPARYGHVNGGGGIEQGIQRSRGENVVVGIAPM
DARRGGGGRKRAREVATMDGHASARWQQPQQHRLERSWPLPHERSAGREG
SQQWDVSEPSPSNSFSRRGSTPCSPREYGGVPHLSSSRQRARQGVGDRVS
LSGFARRGESNDGEGDNGRDGGRGGDDGGRNSNRAGTSARSSDEPLSGGT
GETFSVVSEVSSGGLPPPPLLPSGPLPAIGVIREYFLTGQQQNHLDHERQ
LTADHMRRLNQVLAGHLSYLEVSKVHADRENLLAAAPSHGSAVGYSSSID
DVEDAKGASRQASPRQAILRRLVVRVARERTRQGLSKAWFRMWRYSTWVA
ARSATVAKPVVPRPVDTARKQVKGTRDPTAVEDELPWPTTACASDRRQQG
IRIVGRVYQNRRRRAVFRGWSRLCLHAASLSAAEGASAAATAVARAARAE
AMEKEAGAAADKAEAWRRAAAASAEVAEAREKAQREAARGSVLTAELHQN
KEDMEQVVRQQQLRRMKTLITRVRGERDRALLFRGWSRLCLHAASACAAE
GASAAATTFAKAARAEAMEKEAESAAARAEAAAAKEEARQATSRRSMLET
ELTLKITRVCGERDRFRMFRGWSRLCLHAASLSAAEGASAAATAAARATR
AEAMQLEAVAAAEKIKALKTEAPTSANGAAEVGEPLEQALTTERWRRAGM
LIGRVCATRDRSLMFRGWSRVCLHAASLSAAEGASAAATAIARAARAEAM
EKEAEAATDKAEAWRRAATASADVAEAREKAQRLSTGVSSLTAELQRRGE
DTDQLMREQQLRRMKMLIARVCGERDRALMFRGWSRLFLHAASLSAAEAA
SASATAVARATRAEAMEKEAEAAAEKAEAEKAQREAARGSVLTAELHQSK
EEMKQVVRQQQLRRMKMLITRVCGERDRALLFRGWSRVCLHAASLSAAEG
ASATATAVARAARAEALEKEAESAAARAAVAAAREEEQRETDRRVILAAK
AKGRQEDISRLCKERDMRLLFRGWTRLCLHAASLNAVDAMTATSTTARVA
RGGAAPTDTATAGAAAGIATDTAASQQRDAREHAHRADEMEKRAAAAADQ
VKALENAAAVSLRAVEEKKRQQIISGGLDSLAIVRRSSVPKYFEKFDWCG
ICVMCRMNIRSSITNNACFLPRMPSDN*
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