prot_L-elsbetiae_contig18215.5262.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig18215.5262.1
Unique Nameprot_L-elsbetiae_contig18215.5262.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length63
Homology
BLAST of mRNA_L-elsbetiae_contig18215.5262.1 vs. uniprot
Match: A0A6H5L0W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W4_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 3.130e-36
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0
Query:    1 ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETSNASKK 63
            ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELET+NASKK
Sbjct:   37 ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKK 99          
BLAST of mRNA_L-elsbetiae_contig18215.5262.1 vs. uniprot
Match: D7FHD2_ECTSI (PRP1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD2_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 2.290e-33
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0
Query:    1 ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETSNASKK 63
            ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELET+NASKK
Sbjct:  200 ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKK 262          
BLAST of mRNA_L-elsbetiae_contig18215.5262.1 vs. uniprot
Match: A0A835YM25_9STRA (PRP1_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM25_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 6.240e-21
Identity = 44/63 (69.84%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    1 ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETSNASKK 63
            ARK IK GCE CPDNEDVWLE ARLQTP+NAKTVLANA+R+LP SVKI     +LET    K+
Sbjct:  189 ARKVIKQGCETCPDNEDVWLEAARLQTPDNAKTVLANAVRHLPGSVKIXXXXXDLETDATKKR 251          
BLAST of mRNA_L-elsbetiae_contig18215.5262.1 vs. uniprot
Match: A0A7S3LP65_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LP65_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.170e-20
Identity = 41/63 (65.08%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    1 ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETSNASKK 63
            AR  I+ GCEACP++EDVWLE ARLQT ++AK VLANA+R++P SVK+WL AA+LE+SN + K
Sbjct:  184 ARVLIQKGCEACPESEDVWLEAARLQTAQHAKAVLANAVRHIPRSVKLWLHAADLESSNPTNK 246          
BLAST of mRNA_L-elsbetiae_contig18215.5262.1 vs. uniprot
Match: R1E6U8_EMIHU (PRP1_N domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E6U8_EMIHU)

HSP 1 Score: 90.5 bits (223), Expect = 1.030e-19
Identity = 41/58 (70.69%), Postives = 49/58 (84.48%), Query Frame = 0
Query:    1 ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETS 58
            AR+ I+ GC AC  NEDVWLE ARLQTPENAK VLA+AI+ +PTSVKIWL+AA LE++
Sbjct:  305 ARQIIREGCRACAANEDVWLEAARLQTPENAKVVLADAIKKIPTSVKIWLQAASLESN 362          
BLAST of mRNA_L-elsbetiae_contig18215.5262.1 vs. uniprot
Match: A0A8H7SJU0_9FUNG (PRP1_N domain-containing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SJU0_9FUNG)

HSP 1 Score: 90.1 bits (222), Expect = 1.400e-19
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    1 ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETSNASKK 63
            AR TI  GCE CP NEDVWLE ARL T +NAK +L +A+R+LP SVKIWL+A  +ET N +KK
Sbjct:  298 ARNTIAKGCEQCPKNEDVWLEAARLNTVDNAKIILGDAVRHLPQSVKIWLKAVSMETDNKAKK 360          
BLAST of mRNA_L-elsbetiae_contig18215.5262.1 vs. uniprot
Match: A0A4P9YZQ8_9FUNG (PRP1 splicing factor, N-terminal-domain-containing protein (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YZQ8_9FUNG)

HSP 1 Score: 89.0 bits (219), Expect = 3.560e-19
Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETSNASKK 63
            AR  I  GCEACP +EDVWLE ARL + ENAK +LANA+R +P SVKIWL A  LET  A+KK
Sbjct:  297 ARNIITQGCEACPKSEDVWLEAARLNSNENAKIILANAVREIPQSVKIWLHALHLETETAAKK 359          
BLAST of mRNA_L-elsbetiae_contig18215.5262.1 vs. uniprot
Match: A0A8H7ERX6_9FUNG (PRP1_N domain-containing protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7ERX6_9FUNG)

HSP 1 Score: 89.0 bits (219), Expect = 3.590e-19
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    1 ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETSNASKK 63
            AR  I  GCE CP NEDVWLE ARL T +NAK +LANA+R+LP SVKIWL+A +LET   ++K
Sbjct:  298 ARSIIAKGCEQCPKNEDVWLESARLNTVDNAKIILANAVRHLPQSVKIWLKAVDLETDQKAQK 360          
BLAST of mRNA_L-elsbetiae_contig18215.5262.1 vs. uniprot
Match: A0A0B7N0S3_9FUNG (PRP1_N domain-containing protein n=6 Tax=Mucoraceae TaxID=34489 RepID=A0A0B7N0S3_9FUNG)

HSP 1 Score: 88.6 bits (218), Expect = 4.900e-19
Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETSNASKK 63
            AR TI  GCE CP NED+WLE ARL   +NAK +L +A+R+LP SVKIWL+A  LET N +KK
Sbjct:  300 ARNTIAKGCEQCPKNEDIWLEAARLNNVDNAKIILGDAVRHLPQSVKIWLKAVSLETDNKAKK 362          
BLAST of mRNA_L-elsbetiae_contig18215.5262.1 vs. uniprot
Match: A0A163J8L8_ABSGL (PRP1_N domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A163J8L8_ABSGL)

HSP 1 Score: 88.6 bits (218), Expect = 4.920e-19
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    1 ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETSNASKK 63
            AR TI  GC  CP NEDVWLE ARL T +NAK +LA+A+R++P SVKIWLRA  LET + +KK
Sbjct:  284 ARNTIAKGCAQCPKNEDVWLESARLNTVDNAKIILADAVRSIPQSVKIWLRAVNLETDSKNKK 346          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18215.5262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0W4_9PHAE3.130e-3698.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHD2_ECTSI2.290e-3398.41PRP1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YM25_9STRA6.240e-2169.84PRP1_N domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S3LP65_9STRA2.170e-2065.08Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
R1E6U8_EMIHU1.030e-1970.69PRP1_N domain-containing protein n=1 Tax=Emiliania... [more]
A0A8H7SJU0_9FUNG1.400e-1963.49PRP1_N domain-containing protein n=1 Tax=Thamnidiu... [more]
A0A4P9YZQ8_9FUNG3.560e-1965.08PRP1 splicing factor, N-terminal-domain-containing... [more]
A0A8H7ERX6_9FUNG3.590e-1963.49PRP1_N domain-containing protein n=1 Tax=Apophysom... [more]
A0A0B7N0S3_9FUNG4.900e-1961.90PRP1_N domain-containing protein n=6 Tax=Mucoracea... [more]
A0A163J8L8_ABSGL4.920e-1963.49PRP1_N domain-containing protein n=1 Tax=Absidia g... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 26..58
e-value: 0.0054
score: 26.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..62
e-value: 7.0E-8
score: 34.0
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 1..62
IPR027108Pre-mRNA-processing factor 6/Prp1/STA1PANTHERPTHR11246:SF1PRE-MRNA-PROCESSING FACTOR 6coord: 1..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18215contigL-elsbetiae_contig18215:2694..2882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18215.5262.1mRNA_L-elsbetiae_contig18215.5262.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig18215 2694..2882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig18215.5262.1 ID=prot_L-elsbetiae_contig18215.5262.1|Name=mRNA_L-elsbetiae_contig18215.5262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=63bp
ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWL
RAAELETSNASKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR011990TPR-like_helical_dom_sf
IPR027108Prp6/Prp1/STA1