prot_L-elsbetiae_contig18031.5171.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig18031.5171.1
Unique Nameprot_L-elsbetiae_contig18031.5171.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length72
Homology
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BLAST of mRNA_L-elsbetiae_contig18031.5171.1 vs. uniprot
Match: A0A6H5KBA3_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBA3_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 7.490e-32
Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 0 
Query:    1 NDLRSAIVKEACVLLEKLSSVAGIYMAALMRDVLNVLLQLMANGNSVIVGQVDSCMRHIIAHSRFPRQLKEV 72
            NDLRSAIVKEACVLLEKLS  AG YMAALMRD+LNVLLQL+ANGNSVIVGQVDSCMRHII HSRFPRQLKEV
Sbjct:   78 NDLRSAIVKEACVLLEKLSDAAGNYMAALMRDMLNVLLQLLANGNSVIVGQVDSCMRHIIEHSRFPRQLKEV 149
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BLAST of mRNA_L-elsbetiae_contig18031.5171.1 vs. uniprot
Match: D8LJI4_ECTSI (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI4_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 7.570e-32
Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 0 
Query:    1 NDLRSAIVKEACVLLEKLSSVAGIYMAALMRDVLNVLLQLMANGNSVIVGQVDSCMRHIIAHSRFPRQLKEV 72
            NDLRSAIVKEACVLLEKLS  AG YMAALMRD+LNVLLQL+ANGNSVIVGQVDSCMRHII HSRFPRQLKEV
Sbjct:   78 NDLRSAIVKEACVLLEKLSDAAGNYMAALMRDMLNVLLQLLANGNSVIVGQVDSCMRHIIEHSRFPRQLKEV 149
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18031.5171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBA3_9PHAE7.490e-3291.67CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
D8LJI4_ECTSI7.570e-3291.67CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..72
e-value: 2.0E-12
score: 49.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18031contigL-elsbetiae_contig18031:530..2057 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18031.5171.1mRNA_L-elsbetiae_contig18031.5171.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig18031 530..2057 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig18031.5171.1 ID=prot_L-elsbetiae_contig18031.5171.1|Name=mRNA_L-elsbetiae_contig18031.5171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=72bp
NDLRSAIVKEACVLLEKLSSVAGIYMAALMRDVLNVLLQLMANGNSVIVG
QVDSCMRHIIAHSRFPRQLKEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like