prot_L-elsbetiae_contig1798.5143.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1798.5143.1
Unique Nameprot_L-elsbetiae_contig1798.5143.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length85
Homology
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BLAST of mRNA_L-elsbetiae_contig1798.5143.1 vs. uniprot
Match: D7FGV5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV5_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.580e-7
Identity = 34/60 (56.67%), Postives = 39/60 (65.00%), Query Frame = 0 
Query:   21 DTKAIVELMNRAFRHSDCDPLHAKAAMLRSCRAQ-----------ARLLKESRRTLEGGL 69
            D +A+V LMN  FRHS+C PL A+  +LRSC AQ           ARLLKESRRTLEG L
Sbjct: 1272 DAQAVVGLMNSVFRHSECGPLRAET-VLRSCAAQDWLVAGGFEHLARLLKESRRTLEGEL 1330
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1798.5143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGV5_ECTSI1.580e-756.67Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1798contigL-elsbetiae_contig1798:11570..13317 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1798.5143.1mRNA_L-elsbetiae_contig1798.5143.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1798 10904..13370 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1798.5143.1 ID=prot_L-elsbetiae_contig1798.5143.1|Name=mRNA_L-elsbetiae_contig1798.5143.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=85bp
MLSRRERVRDCGFRRQQPSLDTKAIVELMNRAFRHSDCDPLHAKAAMLRS
CRAQARLLKESRRTLEGGLGAAQTPTRRWRPCAG*
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