prot_L-elsbetiae_contig17967.5138.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17967.5138.1
Unique Nameprot_L-elsbetiae_contig17967.5138.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length133
Homology
BLAST of mRNA_L-elsbetiae_contig17967.5138.1 vs. uniprot
Match: A0A6H5JEP8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEP8_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 3.800e-75
Identity = 119/130 (91.54%), Postives = 124/130 (95.38%), Query Frame = 0
Query:    1 AAVQALLPEDEPWNGQKIRPLPELKEFLLANRHHGGKRGMNVITAMMLKAMSEGDIERAKYLKGAAICMTKAENTITGPFRQAVMFAENRLAPCMGSTVCEEYAGNDGADAGATWVVLKACVAEWELRLR 130
            AAV ALLPEDEPWNG KIRPLPELK+FLLANR HGGKRGMNVI+AMMLKAMSEGD++RAKYLKGAAICMTKAE+TITGPFRQAVMFAENRLAPCMGSTVCEEYAG D ADA ATWVVLKACVAEWELRLR
Sbjct:  368 AAVIALLPEDEPWNGAKIRPLPELKDFLLANRRHGGKRGMNVISAMMLKAMSEGDLDRAKYLKGAAICMTKAEDTITGPFRQAVMFAENRLAPCMGSTVCEEYAGEDAADAAATWVVLKACVAEWELRLR 497          
BLAST of mRNA_L-elsbetiae_contig17967.5138.1 vs. uniprot
Match: A0A836CQX4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQX4_9STRA)

HSP 1 Score: 113 bits (283), Expect = 8.480e-27
Identity = 64/130 (49.23%), Postives = 80/130 (61.54%), Query Frame = 0
Query:    1 AAVQALLPEDEPWNGQKIRPLPELKEFLLANRHHGGKRGMNVITAMMLKAMSEGDIERAKYLKGAAICMTKAENTITGPFRQAVMFAENRLAPCMGSTVCEEYAGNDGADAGATWVVLKACVAEWELRLR 130
            AA++AL+P D          +  LKEFL+ANRH GG RG   +T +ML+A S  D  RA  ++   +   KAE+ +TGPFRQA+  AE RLAP MGS     Y G D ADA AT++ LKA VAEWE R R
Sbjct:  157 AALEALVPGDS-------TDVTALKEFLVANRHVGGNRGEAALTQLMLQAQSRRDRARALRMRHLLLAFMKAESAVTGPFRQAIKNAEARLAPNMGSQEVARYGGADAADAVATFLCLKALVAEWEKRYR 279          
BLAST of mRNA_L-elsbetiae_contig17967.5138.1 vs. uniprot
Match: A0A7S4D4Y1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4Y1_HETAK)

HSP 1 Score: 83.2 bits (204), Expect = 5.590e-16
Identity = 43/105 (40.95%), Postives = 62/105 (59.05%), Query Frame = 0
Query:   24 LKEFLLANRHHGGKRGMNVITAMMLKAMSEGDIERAKYLKGAAICMTKAENTITGPFRQAVMFAENRLAPCMGSTVCEEYAGNDGADAGATWVVLKACVAEWELR 128
            L  F++ N+   G +   V+T++ L+A  + D  +A+Y       +   ENT+  PFR  +M  E RLAP MG+   E++AG D AD  ATW++LKA VAEWE R
Sbjct:  273 LSAFVVDNKDLLGVKARKVLTSLKLRAQQQFDKNKARYYDDMRRALILKENTLMAPFRLLMMRTEERLAPMMGNMEPEKWAGQDRADYLATWLLLKAAVAEWEKR 377          
BLAST of mRNA_L-elsbetiae_contig17967.5138.1 vs. uniprot
Match: A0A7S2VZJ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZJ6_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.570e-9
Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 0
Query:   23 ELKEFLLANRHH-GGKRGMNVITAMMLKAMSEGDIERAKYLKGAAICMTKAENTITGPFRQAVMFAENRLAPCMGSTVCEEYAGNDGADAGATWVVLKACVAEWELRL 129
            E  +F+LANR   GG + +     M LKA SEG  ERA YL+     +   E+++  PFRQ V+ AE R+ P  G+     +A     +  + ++VLK  VA WE ++
Sbjct:  236 EALDFVLANRDLLGGWKMLKTFGRMKLKAQSEGQKERALYLRQLWKRLWTLEDSLNAPFRQMVLDAEARVGPNFGNLDVTAFASGHLYERTSNYLVLKGMVAHWEKKV 343          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17967.5138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JEP8_9PHAE3.800e-7591.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CQX4_9STRA8.480e-2749.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D4Y1_HETAK5.590e-1640.95Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2VZJ6_9STRA2.570e-936.11Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17967contigL-elsbetiae_contig17967:327..2319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17967.5138.1mRNA_L-elsbetiae_contig17967.5138.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17967 327..2319 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17967.5138.1 ID=prot_L-elsbetiae_contig17967.5138.1|Name=mRNA_L-elsbetiae_contig17967.5138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=133bp
AAVQALLPEDEPWNGQKIRPLPELKEFLLANRHHGGKRGMNVITAMMLKA
MSEGDIERAKYLKGAAICMTKAENTITGPFRQAVMFAENRLAPCMGSTVC
EEYAGNDGADAGATWVVLKACVAEWELRLRCV*
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