Homology
BLAST of mRNA_L-elsbetiae_contig1793.5129.1 vs. uniprot
Match:
D7FL62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL62_ECTSI)
HSP 1 Score: 168 bits (426), Expect = 6.780e-51
Identity = 119/163 (73.01%), Postives = 127/163 (77.91%), Query Frame = 0
Query: 1 MKGALAAV--CVALMGA-SNAFVVPGPSAIVSGRSTRASTSQVIVMGRGDTRTAKGKRMRHSYGKRRAPRRQGGGNLRGGRPQKQKEVIYFDGEIVKKAAPVARRWENIEYDEASMPKPAPVEAA---VAEEPEAESAVXXXXXXXXXXXXVEEVAEVSPAAE 157
M GALA + VA+M + SNAFVVPGPS +VSGRSTRASTSQVIVMGRGDTRT KGKRMRHSYGK RPQKQKEV+YF+GEIVKKAAPVARRWENIEYDEASMPKPAPVEAA V E EA+SAVXXXXXXXXXXXX E +PAAE
Sbjct: 1 MHGALATLGLVVAMMASVSNAFVVPGPSQVVSGRSTRASTSQVIVMGRGDTRTTKGKRMRHSYGK--------------CRPQKQKEVVYFEGEIVKKAAPVARRWENIEYDEASMPKPAPVEAAAEEVTEAEEADSAVXXXXXXXXXXXXXVAEEEAAPAAE 149
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1793.5129.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M K G A L A A V C V A L M G A S N A F V V P G P S A I V S G R S T R A S T S Q V I V M G R G D T R T A K G K R M R H S Y G K R R A P R R Q G G G N L R G G R P Q K Q K E V I Y F D G E I V K K A A P V A R R W E N I E Y D E A S M P K P A P V E A A V A E E P E A E S A V E E A E A E A A P V A A V E E V A E V S P A A E 20 40 60 80 100 120 140 Expect = 6.78e-51 / Id = 73.01 Sequence D7FL62_ECTSI
Match Name E-value Identity Description
D7FL62_ECTSI 6.780e-51 73.01 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M K G A L A A V C V A L M G A S N A F V V P G P S A I V S G R S T R A S T S Q V I V M G R G D T R T A K G K R M R H S Y G K R R A P R R Q G G G N L R G G R P Q K Q K E V I Y F D G E I V K K A A P V A R R W E N I E Y D E A S M P K P A P V E A A V A E E P E A E S A V E E A E A E A A P V A A V E E V A E V S P A A E 20 40 60 80 100 120 140 Score = Score = Score = Score = Score = Score = Score = 0.666 Expect = 2.1E-7 / Score = 28.8 Sequence Coil SIGNAL_PEPTIDE_N_REGION SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE SIGNAL_PEPTIDE_H_REGION NON_CYTOPLASMIC_DOMAIN SignalP-noTM TIGR04560
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 119..139
None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..2
None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 14..18
None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..18
None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 3..13
None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 19..157
None No IPR available SIGNALP_EUK SignalP-noTM SignalP-noTM coord: 1..18 score: 0.666
IPR030826 30S ribosomal protein TIGRFAM TIGR04560 TIGR04560 coord: 43..65 e-value: 2.1E-7 score: 28.8
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_L-elsbetiae_contig1793.5129.1 ID=prot_L-elsbetiae_contig1793.5129.1|Name=mRNA_L-elsbetiae_contig1793.5129.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=157bp MKGALAAVCVALMGASNAFVVPGPSAIVSGRSTRASTSQVIVMGRGDTRT AKGKRMRHSYGKRRAPRRQGGGNLRGGRPQKQKEVIYFDGEIVKKAAPVA RRWENIEYDEASMPKPAPVEAAVAEEPEAESAVEEAEAEAAPVAAVEEVA EVSPAAE back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR030826 Ribo_THX