prot_L-elsbetiae_contig1793.5128.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1793.5128.1
Unique Nameprot_L-elsbetiae_contig1793.5128.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length284
Homology
BLAST of mRNA_L-elsbetiae_contig1793.5128.1 vs. uniprot
Match: A0A6H5J616_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J616_9PHAE)

HSP 1 Score: 399 bits (1026), Expect = 5.650e-138
Identity = 190/212 (89.62%), Postives = 203/212 (95.75%), Query Frame = 0
Query:   72 RMSATAEISSFPYEDVLPFLKEHVQPSDQMLLLGCGTELALQLSRDGYGTRDKRSLMRCIDSDPDLVSAMKAAAEADPVCAKHMASGNLVFEALDVTGGMPELEQSSVDCVVDAGLLDKLVTTQGVDAAKACSDAAHRAVRLGNPLVALSMIDKDDFSQIFDGNWGWMQELDGDPGAVSQWYRDKKVNLKDVGNNFVELGISFFVYTNVDNC 283
            RM+ATAEI SFPYEDVLPFLKEHVQPSDQMLLLGCGTEL LQLSRDGYGTRD RS MRCIDSDPDL++AMK AAEADPVC+K+MA+G L+FEALDV GGMPEL QSS DCV+DAGLLDKL+TT+G+DAAKACSDAAHRAVRLGNPLVALSMI+KDDF+QIFDGNWGWMQELDGDPGAVSQWYRDKKVNLKDVGNNFVELGISFFVYTNVDNC
Sbjct:   77 RMAATAEIGSFPYEDVLPFLKEHVQPSDQMLLLGCGTELPLQLSRDGYGTRDGRSFMRCIDSDPDLIAAMKNAAEADPVCSKNMAAGKLIFEALDVAGGMPELTQSSADCVIDAGLLDKLITTEGLDAAKACSDAAHRAVRLGNPLVALSMINKDDFAQIFDGNWGWMQELDGDPGAVSQWYRDKKVNLKDVGNNFVELGISFFVYTNVDNC 288          
BLAST of mRNA_L-elsbetiae_contig1793.5128.1 vs. uniprot
Match: A0A835Z3E3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3E3_9STRA)

HSP 1 Score: 229 bits (585), Expect = 3.410e-71
Identity = 114/210 (54.29%), Postives = 147/210 (70.00%), Query Frame = 0
Query:   75 ATAEISSFPYEDVLPFLKEHVQPSDQMLLLGCGTELALQLSRDGYGTRDKRSLMRCIDSDPDLVSAMKAAAEADPVCAKHMASGNLVFEALDVTGGMPELEQSSVDCVVDAGLLDKLVTTQGVDAAKACSDAAHRAVRLGNPLVALSM-IDKDDFSQIFDGNWGWMQELDGDPGAVSQWYRDKKVNLKDVGNNFVELGISFFVYTNVDNC 283
            A+  +++FPY+ VLPFLKEHVQPSDQ+L+LG    L L LS DGYGTRD RS +  +DSD   + A + AA  +P  A ++A+G L FE  +    M +LEQS VD V+D G++D L++T G  AA    DA HRAVRLGNPL+ LS   DKD F   F+  +GW+QELDGDPGAVS W+RD+K+N+K V N+F  LG+  +VYTNVDNC
Sbjct:   71 ASEGLAAFPYDSVLPFLKEHVQPSDQLLILGARNTLPLLLSADGYGTRDTRSFVLVVDSDAVALEAAQKAAALNPATAANLAAGQLRFELKEDLTAMDDLEQSCVDAVLDNGMIDWLLSTGGEAAAGGMIDAVHRAVRLGNPLICLSSGTDKDTFCSPFESRFGWVQELDGDPGAVSMWHRDQKINMKGVANDFAALGLKMYVYTNVDNC 280          
BLAST of mRNA_L-elsbetiae_contig1793.5128.1 vs. uniprot
Match: A0A7S2Y0F7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0F7_9STRA)

HSP 1 Score: 176 bits (445), Expect = 2.220e-50
Identity = 93/214 (43.46%), Postives = 129/214 (60.28%), Query Frame = 0
Query:   74 SATAEISSFPYEDVLPFLKEHVQPSDQMLLLGCGTELALQLSRDGYGTRDKRSLMRCIDSDPDLVSAMKAAAEADPVCAKHMASGNLVFEALDVTGGMPELEQSSVDCVVDAGLLDKLVTTQGVDAAKACSDAAHRAVRLGNPLVALSMIDKDDFSQIFDGNWGWMQELDGDPGAVSQWYRDKKVNLKDVGNN----FVELGISFFVYTNVDNC 283
            S+T   +   Y+  LPFLKEH+   DQ+L+ G G  LA++L  DGYG   K  ++ CID D + V       E  P   K M SG + FE  D      +LEQS VD VVD   +D+L   +G +A     +AAH+AVRLGNPL++LS +D++ ++  F   +GW++ELDGDP AVS WYRD+  N  +VG N    FV+ G+  +VY+N+DNC
Sbjct:   51 SSTLTEADLDYDAALPFLKEHLTKHDQLLIFGTGDGLAIRLLEDGYGLEGKGDVI-CIDYDEEKVKTAITTVEGIPALKKDMDSGKIRFEC-DPFTSFDKLEQSCVDAVVDFAAIDRLYDERGEEAVSDIIEAAHKAVRLGNPLISLSKLDQETYTSFFGSKFGWVEELDGDPTAVSMWYRDQGTN-SNVGKNDASDFVQRGLKLYVYSNLDNC 261          
BLAST of mRNA_L-elsbetiae_contig1793.5128.1 vs. uniprot
Match: A0A7S0SVS2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SVS2_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.290e-41
Identity = 84/207 (40.58%), Postives = 122/207 (58.94%), Query Frame = 0
Query:   79 ISSFPYEDVLPFLKEHVQPSDQMLLLGCGTELALQLSRDGYGTRDKRSLMRCIDSDPDLVSAMKAAAEADPVCAKHMASGNLVFEALDVTGGMPELEQSSVDCVVDAGLLDKLVTTQGVDAAKACS---DAAHRAVRLGNPLVALSMIDKDDFSQIFDGNWGWMQELDGDPGAVSQWYRDKKVNLKDVGNNFVELGISFFVYTNVDN 282
            I   PY D++PFL EH+Q SDQ+L LG  T+++L L +DGYGT+     +  ID++  LV+ +      D    K++ +  L    +D +      +QS+ D +VD GLLD ++ +   D  K      D    AVRLGN L+ LS IDK+ F + F+  +GW+QELDGDPG +SQWYR K  N++   +NF + G+  +VYTN DN
Sbjct:   29 IVKSPYSDIIPFLSEHIQLSDQILFLGASTDMSLSLLKDGYGTK-LTGRLTVIDNNNALVNDLNKVVSNDIDLKKYLGN-RLSIHKVDESNLSSICKQSTFDSIVDYGLLDSILLSDKPDKYKTFLNYIDNLQNAVRLGNILICLSTIDKEIFCKPFEERFGWVQELDGDPGEISQWYRGK-TNIQATASNFKKHGLKMYVYTNTDN 232          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1793.5128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J616_9PHAE5.650e-13889.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z3E3_9STRA3.410e-7154.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2Y0F7_9STRA2.220e-5043.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0SVS2_9STRA1.290e-4140.58Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 51..248
e-value: 7.1E-13
score: 50.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..283
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..41
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.476

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1793contigL-elsbetiae_contig1793:9034..13796 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1793.5128.1mRNA_L-elsbetiae_contig1793.5128.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1793 8333..13827 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1793.5128.1 ID=prot_L-elsbetiae_contig1793.5128.1|Name=mRNA_L-elsbetiae_contig1793.5128.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=284bp
MTSALSGIGRWGLVVAAVSLRSFSVDSFFVGSASTAQRVNAFDRSSSRGQ
QQQQQKQQQRETGCRSSLPEDRMSATAEISSFPYEDVLPFLKEHVQPSDQ
MLLLGCGTELALQLSRDGYGTRDKRSLMRCIDSDPDLVSAMKAAAEADPV
CAKHMASGNLVFEALDVTGGMPELEQSSVDCVVDAGLLDKLVTTQGVDAA
KACSDAAHRAVRLGNPLVALSMIDKDDFSQIFDGNWGWMQELDGDPGAVS
QWYRDKKVNLKDVGNNFVELGISFFVYTNVDNC*
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