prot_L-elsbetiae_contig17889.5103.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17889.5103.1
Unique Nameprot_L-elsbetiae_contig17889.5103.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length527
Homology
BLAST of mRNA_L-elsbetiae_contig17889.5103.1 vs. uniprot
Match: D7G0U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U5_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 1.910e-12
Identity = 152/466 (32.62%), Postives = 187/466 (40.13%), Query Frame = 0
Query:   93 HPSKKRRTPSPEADRRAPSATGLVSAELAGADETAEEAAASRERA-----------------LQEAEVIRWCQKVSSSRGMSSAGGSGGDSGVGSSVSSGDEERFFAGRVLDPAPR-----PARSRQGGS-------GSGSRDTRIAS----LNNGSLGW-VGEMMEEASPARSQQHNGNGDGGXXXXXXADGSGGFRGGSSREDERATTKAGESGAVLPAASSDYPRGRQSGAEIAAALASASGAAASAETVQALGNEAVPKAA-AGPGQGSTSCPSNTNQEAFFARHTLEPKPRLRGTVAPLAAQGEAPESGEFSSNFG----------------PGXXXXXXXXXXXSGSRSWT-EHLSPPRGSDALGSHRLIPREEEVLXXXXXXXXXXXXXXXXXSSGSSMDWQVRPEAMMGYFTTVGGVA--PPSLLRPGRRRGAAGARARARQSSPGVAAAAAARHGEQ 504
            H SKK RTPSPE+ R++  A    +    G+      AAA+R  A                 L+EAEVI+WCQ+ SS R +S  GG           ++G +E+FFA RVLDP P       AR+R GGS       G G+ +T  +S    L    L + VGE+  +    R   H+G+G  G       D + G     S  DE A    G + A  P A+    R   +     AALASA                        G G+   S PS   QE FFA HTLEP P     VA     GEA  +G  +   G                P            +GS S   E  +P   SD  G  R  P  EEV                  SSGS+ DWQVRP AM G+FTTVG  A  P +LL   RR      R     S P V  AA AR G Q
Sbjct:  259 HASKKHRTPSPESARKSSLAAEDAADSAMGSSNAG--AAAARPGAXXXXXXXXXXXXXXXXXLREAEVIQWCQRGSSPRAISGDGG----------AAAGPDEKFFAARVLDPVPARHWPGTARTRTGGSKVSDAVFGWGAAETAASSSPPPLRPPCLRFGVGELSGDGR--REDNHSGSGSSGG-----TDAASGLDQFPSSRDEAAMV--GVTRAASPPAAKCNSRSPLASGFAGAALASAXXXXXXXXXXXXXXXXXXXXXXXTGSGR---SPPSAREQEGFFASHTLEPSPGRSWIVA----AGEAGSAGGETHRAGASGTTVPKPAHGIPMPPDSQRSDDDASGAAGSGSERREGHNPLCWSDTAG--RYPPLFEEVAAGAAVVDTE--------SSGSANDWQVRPGAMAGFFTTVGHSACSPAALLLSQRRPSPPRVR-----SPPAVGPAAPARVGIQ 681          
BLAST of mRNA_L-elsbetiae_contig17889.5103.1 vs. uniprot
Match: A0A6H5JYD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD8_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 6.060e-11
Identity = 126/425 (29.65%), Postives = 168/425 (39.53%), Query Frame = 0
Query:   93 HPSKKRRTPSPEADRRAPSATGLVSAELAGADETAEEAAASRERALQE-----------------AEVIRWCQKVSSSRGMSSAGGSGGDSGVGSSVSSGDEERFFAGRVLDPAPR-----PARSRQGGS-------GSGSRDTRIASLNNG------SLGWVGEMMEEASPARSQQHNGNGDGGXXXXXXADGSGGFRGGSSREDERATTKAGESGAVLPAASSDYPRGRQSGAEIAAALASASGAAASAETVQALGNEAVPKAAAGPGQGSTSCPSNTNQEAFFARHTLEPKPRLRGTVAPLAAQGEAPESGEFSSNFGPGXXXXXXXXXXXSGSRSWTEHLSPPR--GSDALGSHRLIPREEEV--LXXXXXXXXXXXXXXXXXSSGSSMDWQVRPEAMMGYFTTV--GGVAPPSLLRPGRR 476
            H  KKRRTPSP+  R++  A    +    G+      AAA+R  A+                   AEVIRWCQ+VSS+R MS  GG+    G  SS ++G +E+FFAGRVL+P P       AR+R GGS       G G+  T  +SL          LG VG +        + +      GG      +D     +  SSR++E     AG + A  P  +    R   +     AALAS                           +   S PS   Q+ F   HTLEPKPR R  +    A+G A    + +   G               S+      S P   GS     H  +   +                      SSGS+ DWQVRPEAM+G+FTTV     +P +LL   RR
Sbjct:  433 HAPKKRRTPSPDTARKSSPAAEDAAHSAMGSSSAG--AAAARPGAVDXXXXXXXXXXXXXXXXXXAEVIRWCQRVSSARAMSGDGGAAPGVGGISSSAAGPDEKFFAGRVLEPVPSRHWPGTARTRTGGSNVSDAVFGRGAAVTAASSLPPPLQPPYLGLG-VGNLSSRGRGDDNHRSGSGSSGGTDATRDSD-----QCPSSRDEE---AMAGVTRAASPPTAKCNSRIPLASGFAGAALASXXXX--XXXXXXXXXXXXXXXXXXXXXESRQSPPSAQEQQGFLDSHTLEPKPR-RSWILAAGAEGSARGETQGAGASGTAVPKPAHGIPMPPDSQRSDHDASGPAWSGSQRREGHNPLCWSDTAGRNPPVFEEGAAGAAVADTESSGSANDWQVRPEAMVGFFTTVDHSACSPAALLHSQRR 843          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17889.5103.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0U5_ECTSI1.910e-1232.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYD8_9PHAE6.060e-1129.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17889contigL-elsbetiae_contig17889:618..2946 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17889.5103.1mRNA_L-elsbetiae_contig17889.5103.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17889 618..2947 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17889.5103.1 ID=prot_L-elsbetiae_contig17889.5103.1|Name=mRNA_L-elsbetiae_contig17889.5103.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=527bp
SGDDERRAGGGGRRGRAEDGNSSSGSSGGGGRDGGGKRPGVRRRQEDGNS
RNSSEERNGRLGWDVGRSWGTGGGRAHSSGKTDRRRCKEEGGHPSKKRRT
PSPEADRRAPSATGLVSAELAGADETAEEAAASRERALQEAEVIRWCQKV
SSSRGMSSAGGSGGDSGVGSSVSSGDEERFFAGRVLDPAPRPARSRQGGS
GSGSRDTRIASLNNGSLGWVGEMMEEASPARSQQHNGNGDGGNGNGFGAD
GSGGFRGGSSREDERATTKAGESGAVLPAASSDYPRGRQSGAEIAAALAS
ASGAAASAETVQALGNEAVPKAAAGPGQGSTSCPSNTNQEAFFARHTLEP
KPRLRGTVAPLAAQGEAPESGEFSSNFGPGGGGGGGGSDGGSGSRSWTEH
LSPPRGSDALGSHRLIPREEEVLAAAAVAAKAAAAVSAAESSGSSMDWQV
RPEAMMGYFTTVGGVAPPSLLRPGRRRGAAGARARARQSSPGVAAAAAAR
HGEQLAVPAGEPHPGGQPPPCGSGAPP
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