prot_L-elsbetiae_contig1779.5059.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1779.5059.1
Unique Nameprot_L-elsbetiae_contig1779.5059.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length318
Homology
BLAST of mRNA_L-elsbetiae_contig1779.5059.1 vs. uniprot
Match: D7G5I6_ECTSI (RRP7 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5I6_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 1.800e-119
Identity = 211/334 (63.17%), Postives = 238/334 (71.26%), Query Frame = 0
Query:    1 MALVAKGYRVVPQSLAD---NHGRGFRHLHLKEHRGVFKASGPAAEKKGGGKVVFA--KGKTLFVGNVDDEGGRLCRRAIEDRLRRALSSCGDILHVQASLVVDSGVVGAGXXXXXXXXXXXARGKRAPDAARYAHVCFSSAKGVQQALCLEELSSGALASEG------------GRGQDGTTIPEGESRDDNGDQTCGYAALIQRHRRKFPPRKALQSEVDSSMHRFEKAEAEELAERKALLEKPEDDDGFVTVTHKRKRGRNSSTNGTPSDGEGVTADGAKKKRKGAGELSDFYRFQMRETRREQLATLRSKFEKDKARVAKMKEQRKFRPF 317
            MALVAKGYRVVPQ+LAD      RGFRHLHLKEH+G+FKA+  AA  +GG +   A  +G TLFVGNVDD+GGRLCR+ IE RLRRALS CG ILHVQ S    S   G G             G++   AAR+AHVCFSS KGVQ+AL LE+L SGA  +                               NGD+TCGYAALIQRHRRKFPPRKALQ EVD++M RFE+ E+ E+A+RKA+LE PE DDGFVTVT+KRKRGRNS   GT +  +GV A GAKKKRKGAGELSDFYRFQMRETRREQLATLRSKFE+DKARVAKMKEQRKFRPF
Sbjct:    1 MALVAKGYRVVPQALADAGAGTSRGFRHLHLKEHKGLFKAAVSAAGGEGGRETTAASARGTTLFVGNVDDQGGRLCRKTIEARLRRALSPCGKILHVQVSAAA-SAATGGGVGDARGTTVT---GRKHTGAARFAHVCFSSTKGVQRALALEQLPSGASTASATXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGDETCGYAALIQRHRRKFPPRKALQEEVDATMLRFEEEESAEIAQRKAMLENPEGDDGFVTVTYKRKRGRNSG-GGTGNPPDGVVAGGAKKKRKGAGELSDFYRFQMRETRREQLATLRSKFEQDKARVAKMKEQRKFRPF 329          
BLAST of mRNA_L-elsbetiae_contig1779.5059.1 vs. uniprot
Match: A0A835Z5W2_9STRA (Ribosomal RNA-processing protein 7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5W2_9STRA)

HSP 1 Score: 102 bits (254), Expect = 9.410e-22
Identity = 92/265 (34.72%), Postives = 125/265 (47.17%), Query Frame = 0
Query:   55 GKTLFVGNVDDEGGRLCRRAIEDRLRRALSSCGDILHVQASLVVDSGVVGAGXXXXXXXXXXXARGKRAP--DAARYAHVCFSSAKGVQQALCLEELSSGALASEGGRGQDGTTIPEGESRDDNGDQTCGYAALIQRHRRKFPPRKALQSEVDSSMHRFEKAEAEELAERKALLEKPEDDDGFVTVTHKRKRGRNSSTNGTPSDGEGVTADGAKKKRKGAGELSDFYRFQMRETRREQLATLRSKFEKDKARVAKMKEQRKFRPF 317
            G+TLF  NVDD+GG L   A++ RL       G I  V+  +  DS   GAG           A     P    AR A + FS A  +++AL  ++L                        DD G  T G AA++Q++R   P  + L+  VD+ +  F+  EAE+  ER     +  D DGFVTVT+K+                          +    EL +FYRFQMRE +REQLATLR KFE+DKA++ +MK  RKF+PF
Sbjct:   38 GRTLFAVNVDDDGGTLTDAALKARLTAQWEGFGPIDAVEL-VERDSSGKGAGKGVDSSSSGHLAGVGAEPLGTRARCARIRFSDAAALKRALAAKQLP--------------------RPPDDAGRLT-GLAAVVQQYRDARPDHEELRQRVDAYIQHFDAKEAEDEQERLDAKNQQPDADGFVTVTYKKXXXXXXXXXXXXXXXXXXXXXXXXXPQ----ELHNFYRFQMREAKREQLATLREKFEQDKAKIERMKAARKFKPF 276          
BLAST of mRNA_L-elsbetiae_contig1779.5059.1 vs. uniprot
Match: A0A2Z6RGN3_9GLOM (Ribosomal RNA-processing protein 7 homolog A-like n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6RGN3_9GLOM)

HSP 1 Score: 91.3 bits (225), Expect = 4.220e-17
Identity = 69/194 (35.57%), Postives = 106/194 (54.64%), Query Frame = 0
Query:  124 PDAARYAHVCFSSAKGVQQALCLEELSSGALASEGGRGQDGTTIPEGESRDDNGDQTCGYAALIQRHRRKFPPRKALQSEVDSSMHRFEKAEAEELAERKALLEKPEDDDGFVTVTHKRKRGRNSSTNGTPSDGEGVTADGAKKKRKGAGELSDFYRFQMRETRREQLATLRSKFEKDKARVAKMKEQRKFRPF 317
            PD++  AH+ F  ++G+++AL + +                 TI +GE        + G +  +Q +R + P +  LQ EVD  M +FE+AE E     +A L +P D+DGF+TVT   +R  N+    T +  +       K K K   EL+DFYRFQMRE +R +L  LR KFE+DK ++AK+K  R+F+P+
Sbjct:  210 PDSS--AHIVFQKSEGLKKALEMTQKKRI------------WTIKDGEI------SSLGLSRWLQDYRLRRPEQIILQEEVDEYMRKFEEAELERHKALEAKLNQP-DEDGFITVTRVGRRSANTDGTITVTAAKPEEIKNLKPKNK---ELTDFYRFQMREAKRNKLIDLRKKFEEDKEKIAKLKAARRFKPY 379          
BLAST of mRNA_L-elsbetiae_contig1779.5059.1 vs. uniprot
Match: UPI001E1DA8E3 (ribosomal RNA-processing protein 7 homolog A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA8E3)

HSP 1 Score: 87.4 bits (215), Expect = 2.640e-16
Identity = 60/136 (44.12%), Postives = 85/136 (62.50%), Query Frame = 0
Query:  182 GYAALIQRHRRKFPPRKALQSEVDSSMHRFEKAEAEELAERKALLEKPEDDDGFVTVTHKRKRGRNSSTNGTPSDGEGVTADGAKKKRKGAGELSDFYRFQMRETRREQLATLRSKFEKDKARVAKMKEQRKFRPF 317
            G +  ++++R      +ALQSE+D  M  +++   +E+ E KA  E   DDDG+VTVT   K G+N     T +  + +T    +KKR+   EL +FY FQMRET+REQ+A LR KFE+DK R+A MK  RKFRP+
Sbjct:  142 GLSKWVRQYREDVVDTEALQSEIDKYMEEYDEKIQKEIEEAKAN-EGIADDDGWVTVT---KYGKNKGAPRTEAHEKALTR--KEKKRRKDKELLNFYSFQMRETKREQIANLRKKFEEDKQRIALMKASRKFRPY 271          
BLAST of mRNA_L-elsbetiae_contig1779.5059.1 vs. uniprot
Match: A0A7S3XPT4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPT4_HETAK)

HSP 1 Score: 86.7 bits (213), Expect = 3.340e-16
Identity = 73/200 (36.50%), Postives = 105/200 (52.50%), Query Frame = 0
Query:  129 YAHVCFSSAKGVQQALCLEELSSGALASEGGRGQDGTTIPEGESRDDNGDQTCGYAALIQRHRRKFPPRKALQSEVDSSMHRFEKAEAEELAERKALLEKPEDDDGFVTVTHKRKRGRNSSTNGTPSDG-EGVTADGAKKKRKGAG----------ELSDFYRFQMRETRREQLATLRSKFEKDKARVAKMKEQRKFRPF 317
            +AHV F S K V+ AL      +GA ++E    +    +   E          G   +I ++R +    + +++  +  M  FEK E EE  ER+     P D DGF  VT+K++          P+DG EGV   G  KKR GA           EL++FYRFQMRE +R+QL  LR +FE+DKARVA+++E R+F+PF
Sbjct:   71 FAHVVFESKKSVKAAL-----RAGAFSAE----EAAAALEAAEP------PPTGLEGIIHKYRSQRLSFEDIENNANIQMAAFEKMEEEEKLERERKRANPVDADGFTLVTYKKQAAPQ------PADGGEGVGRSG--KKRGGAARGRTRNKKKTELTNFYRFQMREAKRDQLQELRRRFEEDKARVARLREGRRFKPF 247          
BLAST of mRNA_L-elsbetiae_contig1779.5059.1 vs. uniprot
Match: U9SVP7_RHIID (Uncharacterized protein n=7 Tax=Rhizophagus TaxID=1129544 RepID=U9SVP7_RHIID)

HSP 1 Score: 87.0 bits (214), Expect = 1.340e-15
Identity = 68/194 (35.05%), Postives = 105/194 (54.12%), Query Frame = 0
Query:  124 PDAARYAHVCFSSAKGVQQALCLEELSSGALASEGGRGQDGTTIPEGESRDDNGDQTCGYAALIQRHRRKFPPRKALQSEVDSSMHRFEKAEAEELAERKALLEKPEDDDGFVTVTHKRKRGRNSSTNGTPSDGEGVTADGAKKKRKGAGELSDFYRFQMRETRREQLATLRSKFEKDKARVAKMKEQRKFRPF 317
            PD++  AH+ F +++G+++AL + +             +D   IP           + G +  +Q +R   P +  LQ EVD  M +FE+AE E     +A L +P D+DGF+ VT   +R  N+    T +  +       K K K   EL+DFYRFQMRET+R +L  LR KFE+DK ++AK+K  R+F+P+
Sbjct:  215 PDSS--AHIVFQNSEGLKKALEMTQKKRIWTI------KDVVEIP-----------SLGLSRWLQDYRLHRPGQIKLQEEVDEYMRKFEEAELERHKALEAKLNQP-DEDGFIMVTRVGRRSANTDGTITVTAAKPEEIKNLKPKNK---ELTDFYRFQMRETKRNKLIDLRKKFEEDKEKIAKLKAARRFKPY 385          
BLAST of mRNA_L-elsbetiae_contig1779.5059.1 vs. uniprot
Match: A0A329SDU2_9STRA (RRP7 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SDU2_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.410e-15
Identity = 67/189 (35.45%), Postives = 98/189 (51.85%), Query Frame = 0
Query:  128 RYAHVCFSSAKGVQQALCLEELSSGALASEGGRGQDGTTIPEGESRDDNGDQTCGYAALIQRHRRKFPPRKALQSEVDSSMHRFEKAEAEELAERKALLEKPEDDDGFVTVTHKRKRGRNSSTNGTPSDGEGVTADGAKKKRKGAGELSDFYRFQMRETRREQLATLRSKFEKDKARVAKMKEQRKFRP 316
            R AHV F + K +++ L +++L + A +                       + CG  A    +RR  P    ++   D  M  F++ EAE+L  R+ L  +  DDDGF TV + +KRG   +        E V A  AKK++  + EL +FYRFQMRE +R+QL TLR +FE+D+  V KMK+  KFRP
Sbjct:  101 RTAHVVFKTEKSLEKMLQVDDLETPAPS-----------------------KPCGLQAYAAEYRRNRPGLSVIKEMADRYMASFDEMEAEDLRRREELKSQV-DDDGFQTVVNTKKRGIVQT--------EEVLARPAKKQK--SKELDNFYRFQMREKKRDQLKTLRERFEEDRQLVEKMKKANKFRP 255          
BLAST of mRNA_L-elsbetiae_contig1779.5059.1 vs. uniprot
Match: A0A0E9NIC1_SAICN (Uncharacterized protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NIC1_SAICN)

HSP 1 Score: 86.7 bits (213), Expect = 1.550e-15
Identity = 72/192 (37.50%), Postives = 101/192 (52.60%), Query Frame = 0
Query:  126 AARYAHVCFSSAKGVQQALCLEELSSGALASEGGRGQDGTTIPEGESRDDNGDQTCGYAALIQRHRRKFPPRKALQSEVDSSMHRFEKAEAEELAERKALLEKPEDDDGFVTVTHKRKRGRNSSTNGTPSDGEGVTADGAKKKRKGAGELSDFYRFQMRETRREQLATLRSKFEKDKARVAKMKEQRKFRPF 317
            AA  AH+ F  A G+Q+ L        AL SE    +   + P      + G    G A     H   +P R  LQ+  D ++  FE  E       K +  +P D+DGFVTVT    RG  S+  G  +D + +     +KK+K  GEL DFYRFQ+RE +RE++  LR KFE+DK RV +M+E+R+FRP+
Sbjct:  193 AASTAHITFLEASGLQKVLS-------ALVSE----KLHQSPPLWGKNVNPGQPPLGLARYQAHHTLSYPSRALLQATADKAIELFESRENMRAVALKRMRSEP-DEDGFVTVT----RGSRSAP-GRAADEDELKEKTEEKKKK--GELQDFYRFQLREKKREKMMELRRKFEEDKVRVREMREKRRFRPY 365          
BLAST of mRNA_L-elsbetiae_contig1779.5059.1 vs. uniprot
Match: A0A0L0HLN4_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HLN4_SPIPD)

HSP 1 Score: 86.3 bits (212), Expect = 1.610e-15
Identity = 90/278 (32.37%), Postives = 128/278 (46.04%), Query Frame = 0
Query:   55 GKTLFVGNVDDEGGRLCRRAIEDRLRRALSSCGDILHVQASLVVD--SGVVGAGXXXXXXXXXXXARGKRAPDAARYAHVCFSSAKGVQQALCL--------EELSSGALASEGGRGQDG-----TTIPEGESRDDNGDQTCGYAALIQRHRRKFPPRKALQSEVDSSMHRFEKAEAEELAERKALLEKPEDDDGFVTVTHKRKRGRNSSTNGTPSDGEGVTADGAKKKRKGAGELSDFYRFQMRETRREQLATLRSKFEKDKARVAKMKEQRKFRPF 317
            G+TLFV N+  +       A E   RR    CG+I  V   ++ D  SG+                  +R  +    AH+ F     V +A+ +        +EL  G  A   G  Q+G     T++P          +  G A  +++H    P  + LQ  VD+S+  FE AE E     +     P D+DGFVTV   R R RN + +G  +       +  KK +    EL DFYRFQMRET+R QLA LR KFE+DK R+A +K  R+F+P+
Sbjct:  100 GRTLFVVNIPVD-------ATERHFRRLFRRCGNIERV---VLKDRHSGMQ-----------------ERVLETGAQAHIVFVEEAAVTKAMAMKSRKRVWSDELEEGNDAE--GDAQEGESCTATSLP----------RPVGLAKWLKQHFASRPRLEDLQRAVDTSLVAFEDAEREARIAAEGRRNVP-DEDGFVTVIRGRGR-RNVNLDGQGASVTAARPEEIKKLKPKKKELVDFYRFQMRETKRNQLAELRRKFEEDKLRIASLKANRRFKPY 336          
BLAST of mRNA_L-elsbetiae_contig1779.5059.1 vs. uniprot
Match: L8HHU1_ACACA (RRP7 domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HHU1_ACACA)

HSP 1 Score: 84.3 bits (207), Expect = 1.130e-14
Identity = 105/287 (36.59%), Postives = 146/287 (50.87%), Query Frame = 0
Query:   57 TLFVGNVDDEGGRLCRRAIEDRLRRALSSCGDILHVQASLVVDS----GVVGAGXXXXXXXXXXXARGKRAP--------DA-AR---YAHVCFSSAKGVQQALCLEELSSGALASEG-------GRGQDGTTIPEGESRDDNGDQTCGYAALIQRHRRKFPPRKALQSEVDSSMHRFEKAEAEELAERKALLEKPEDDDGFVTVTHKRKRGRNS-STNGTP-SDGEGVTADGAKKKRKGAGE-LSDFYRFQMRETRREQLATLRSKFEKDKARVAKMKEQRKFRPF 317
            TLFV NV D+       A+ED+LRR    CG   H   S+ + S        +   XXXXXX    +G R P        DA AR   +AHV FSS  G++ AL  +  S+ A  S+        GRG +   +   E+R D                    P++ L +EVD+ M  F++ +     E +A L KP D DGFVTV   R++GR   +  G P +  +   A  AK +R+ + + L DFYRFQ RE RR+QLA LR +FE+DK ++AK++ QRKF+PF
Sbjct:  128 TLFVANVGDDADA---GAVEDQLRRLFERCG---HPVESVTLKSMRRVPPADSHRQXXXXXXRPAHQGGRGPWLEVAQADDAEARPLVFAHVTFSSPDGLRAALRYDWNSAAAAESDAAGEAAGSGRGVNKWLLEYEEARPD--------------------PQRVL-AEVDAFMADFDRRQRLAEKEEEAALGKP-DADGFVTV---RRKGRKKVADGGIPIASAKAAPALAAKAQRQESDKVLLDFYRFQRRENRRKQLADLRLRFEEDKKKIAKLRAQRKFKPF 383          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1779.5059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5I6_ECTSI1.800e-11963.17RRP7 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z5W2_9STRA9.410e-2234.72Ribosomal RNA-processing protein 7-domain-containi... [more]
A0A2Z6RGN3_9GLOM4.220e-1735.57Ribosomal RNA-processing protein 7 homolog A-like ... [more]
UPI001E1DA8E32.640e-1644.12ribosomal RNA-processing protein 7 homolog A-like ... [more]
A0A7S3XPT4_HETAK3.340e-1636.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
U9SVP7_RHIID1.340e-1535.05Uncharacterized protein n=7 Tax=Rhizophagus TaxID=... [more]
A0A329SDU2_9STRA1.410e-1535.45RRP7 domain-containing protein n=2 Tax=Phytophthor... [more]
A0A0E9NIC1_SAICN1.550e-1537.50Uncharacterized protein n=2 Tax=Saitoella complica... [more]
A0A0L0HLN4_SPIPD1.610e-1532.37Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
L8HHU1_ACACA1.130e-1436.59RRP7 domain-containing protein n=1 Tax=Acanthamoeb... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 197..217
NoneNo IPR availableCOILSCoilCoilcoord: 291..311
IPR024326Ribosomal RNA-processing protein 7, C-terminal domainPFAMPF12923RRP7coord: 192..317
e-value: 6.7E-33
score: 113.3
IPR040446Ribosomal RNA-processing protein 7PANTHERPTHR13191RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATEDcoord: 53..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1779contigL-elsbetiae_contig1779:16017..22951 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1779.5059.1mRNA_L-elsbetiae_contig1779.5059.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1779 15859..23662 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1779.5059.1 ID=prot_L-elsbetiae_contig1779.5059.1|Name=mRNA_L-elsbetiae_contig1779.5059.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=318bp
MALVAKGYRVVPQSLADNHGRGFRHLHLKEHRGVFKASGPAAEKKGGGKV
VFAKGKTLFVGNVDDEGGRLCRRAIEDRLRRALSSCGDILHVQASLVVDS
GVVGAGGGTAAAAAAAAARGKRAPDAARYAHVCFSSAKGVQQALCLEELS
SGALASEGGRGQDGTTIPEGESRDDNGDQTCGYAALIQRHRRKFPPRKAL
QSEVDSSMHRFEKAEAEELAERKALLEKPEDDDGFVTVTHKRKRGRNSST
NGTPSDGEGVTADGAKKKRKGAGELSDFYRFQMRETRREQLATLRSKFEK
DKARVAKMKEQRKFRPF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024326RRP7_C
IPR040446RRP7