prot_L-elsbetiae_contig1777.5051.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1777.5051.1
Unique Nameprot_L-elsbetiae_contig1777.5051.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length122
Homology
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BLAST of mRNA_L-elsbetiae_contig1777.5051.1 vs. uniprot
Match: A0A6H5KZ36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ36_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 4.010e-47
Identity = 87/114 (76.32%), Postives = 97/114 (85.09%), Query Frame = 0 
Query:    1 MPSDVEHSRRTLLDAARVEPARRERRRLLLASGGYLAVFILSAFEILYQSLSRRIVNRPEWWFAWIVFGGPAVLSLCMSVSRFLVARSLGAGLSGWSTDSLSRLPPHIARLVGL 114
            MPSDV+HSRRTLLDAARVEP+RRERRRLL+ASG YL VF  SA EILYQSLSRRIV+ PE WFAWIVFG P  LSLCM+VSR+LVARSLG     W+  SL+RLPP+IARLVG+
Sbjct:    1 MPSDVDHSRRTLLDAARVEPSRRERRRLLIASGCYLMVFAFSAVEILYQSLSRRIVDSPERWFAWIVFGCPGFLSLCMAVSRYLVARSLGNRPGRWNMASLARLPPNIARLVGI 114
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1777.5051.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KZ36_9PHAE4.010e-4776.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..85
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 86..122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..61
NoneNo IPR availableTMHMMTMhelixcoord: 28..47
NoneNo IPR availableTMHMMTMhelixcoord: 62..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1777contigL-elsbetiae_contig1777:3037..8793 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1777.5051.1mRNA_L-elsbetiae_contig1777.5051.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1777 3037..8793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1777.5051.1 ID=prot_L-elsbetiae_contig1777.5051.1|Name=mRNA_L-elsbetiae_contig1777.5051.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp
MPSDVEHSRRTLLDAARVEPARRERRRLLLASGGYLAVFILSAFEILYQS
LSRRIVNRPEWWFAWIVFGGPAVLSLCMSVSRFLVARSLGAGLSGWSTDS
LSRLPPHIARLVGLTPPDSSRR
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