prot_L-elsbetiae_contig177.5012.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig177.5012.1
Unique Nameprot_L-elsbetiae_contig177.5012.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length228
Homology
BLAST of mRNA_L-elsbetiae_contig177.5012.1 vs. uniprot
Match: B5LWF5_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWF5_9PHYC)

HSP 1 Score: 165 bits (418), Expect = 2.700e-46
Identity = 90/229 (39.30%), Postives = 126/229 (55.02%), Query Frame = 0
Query:    2 KRGVSVIYVQLK-LEDTSCHVCLLVFDGRTKMQHYFDPLGFTTEWLVKLMSRRRPFVEGFRVASVEEDSWHGEDSCMQVVLDETGDPNETGNCGVYAFIVTMLCLRHGIGNPKKMATIYTQVCIDRGRAG-RSTRRLWSFLKALFPLAQNLRNSSRQNRASRKAVLSELIWDRFRTDRCGMYCPSSGKLCERTPCGQDIFCWQHRFEFRNKDAEGPDRRRCSAKQVECK 228
            +RGV+VI + L+ L     H  LLVFDG T+ QH+F+P G+   W+ +  +R+ P VEGFRV+SV ED+W  E   +Q + D  G  N  GNC +Y  +V  +CLR+  GNPK+MA I+ +V      A  R + R     K  F +     N      +    ++     +   T RCG+YCP   + C+R  C +DIFCWQHR   RN  A G +RRRC A Q +C+
Sbjct:  103 RRGVAVIALFLRSLNGDEHHASLLVFDGYTRTQHFFNPWGYRNHWMNEAFARKSPLVEGFRVSSVMEDAWPTEPISLQYLYDNNGIANGGGNCVLYCIVVAAMCLRYQKGNPKEMADIFMEVSTSAATASLRKSIRGLQMRKLYFWVNSLNANVVLDTLSDLPGIIFPAPTNPLDT-RCGVYCPKRQRYCKRRRCPEDIFCWQHRHLIRNNHARGSNRRRCVAPQAKCR 330          
BLAST of mRNA_L-elsbetiae_contig177.5012.1 vs. uniprot
Match: Q6XLT4_9PHYC (FirrV-1-N2 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT4_9PHYC)

HSP 1 Score: 139 bits (350), Expect = 3.590e-36
Identity = 80/236 (33.90%), Postives = 129/236 (54.66%), Query Frame = 0
Query:    1 EKRGVSVIYVQL---KLEDTSCHVCLLVFDGRTKMQHYFDPLGFTTEWLVKLMSR-RRPFVEGFRVASVEEDSWHGEDSCMQVVLDETGDPNETGNCGVYAFIVTMLCLRHGIGNPKKMATIYTQVCIDRGRAGR--STRRLWSFLKALFPLAQNLRNSSRQNRASRKAVLSEL--IWDRFRTDRCGMYCPSSGKLCERTPCGQDIFCWQHRFEFRNKDAEGPDRRRCSAKQVECK 228
            +++GV+++ V     K +    HV LLVFDG T+ QH+F+P GF   W+   M+R     V+GFRVASV+ D+W   +  +Q   D+    + +GNC +   +V  +CLR G G+PK MA    ++  ++ RAGR  + + LWS++  +   A+  +N + ++  + + + S L  + D   +  C +Y P     C R  C  DIFCWQHR+  RN  AEG ++  C     +C+
Sbjct:   99 DRKGVAIVLVYFYFTKEKKRGGHVSLLVFDGYTRTQHFFNPWGFRDHWVSIEMARPENQLVKGFRVASVDTDAWLKPNDSLQWAYDKNSLRDGSGNCVLLCVLVAAMCLRFGRGDPKHMADELLRLDENKTRAGREKTLQELWSWMNEITLEARARKNGTVRSDTALRKIPSLLFPVPDAKDSPSCHIYLPDKKTYCLRKRCVNDIFCWQHRYFTRNSHAEGKNKMSCDTPLTKCR 334          
BLAST of mRNA_L-elsbetiae_contig177.5012.1 vs. uniprot
Match: Q8QNP6_ESV1K (EsV-1-13 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP6_ESV1K)

HSP 1 Score: 89.0 bits (219), Expect = 5.660e-17
Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 0
Query:    2 KRGVSVIYVQLKLEDTSC-HVCLLVFDGRTKMQHYFDPLGFTTEWLVKLMSRRRPFVEGFRVASVEEDSWHGEDSCMQVVLDET--GDPNETGNCGVYAFIVTMLCLRHGIGNPKKMATI----------YTQVCIDRG--RAGRSTRRLWSFL 140
            +RG+SV ++ +     +C H CL++FD RT+ QH+F+P      W     S R   VEGF  A + ED+W      MQ V+D    G P   GNC +Y  +V +LC R GIG PK M  +          Y  V +  G    G     LW++L
Sbjct:  102 RRGISVTFLHVMSTQQNCSHACLILFDARTRKQHFFNPEAHVGCWYNIAFSNRPSLVEGFHTAQLNEDTWPTYQQSMQGVVDNNHYGLP---GNCMLYCTLVGVLCTRFGIGKPKLMGEMIVEALQEIDTYNNVDVHHGINHVGSHMTHLWNWL 252          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig177.5012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
B5LWF5_9PHYC2.700e-4639.30Uncharacterized protein n=1 Tax=Feldmannia species... [more]
Q6XLT4_9PHYC3.590e-3633.90FirrV-1-N2 n=1 Tax=Feldmannia irregularis virus a ... [more]
Q8QNP6_ESV1K5.660e-1735.06EsV-1-13 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig177contigL-elsbetiae_contig177:15429..16112 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig177.5012.1mRNA_L-elsbetiae_contig177.5012.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig177 15429..16112 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig177.5012.1 ID=prot_L-elsbetiae_contig177.5012.1|Name=mRNA_L-elsbetiae_contig177.5012.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=228bp
EKRGVSVIYVQLKLEDTSCHVCLLVFDGRTKMQHYFDPLGFTTEWLVKLM
SRRRPFVEGFRVASVEEDSWHGEDSCMQVVLDETGDPNETGNCGVYAFIV
TMLCLRHGIGNPKKMATIYTQVCIDRGRAGRSTRRLWSFLKALFPLAQNL
RNSSRQNRASRKAVLSELIWDRFRTDRCGMYCPSSGKLCERTPCGQDIFC
WQHRFEFRNKDAEGPDRRRCSAKQVECK
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