prot_L-elsbetiae_contig1769.5002.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1769.5002.1
Unique Nameprot_L-elsbetiae_contig1769.5002.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length387
Homology
BLAST of mRNA_L-elsbetiae_contig1769.5002.1 vs. uniprot
Match: D8LEI6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEI6_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 8.310e-45
Identity = 135/253 (53.36%), Postives = 147/253 (58.10%), Query Frame = 0
Query:  141 MEKEEEERQTLLKTMSRTERRKERVASGLKATASGRNXXXXXXXXXXXXXXXX-ASLVEDGVLFRPGPTAIRLRTAKQMQLEVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---GSLTVKRRASYGSDGPAALAGRGEGRGVVLEVNRTGGXXXXXXXXXXXXXXXASGEGRPNMIFTPSLVPVGMDSVRARPMTLGGAEGAGVVGSVRWEGEATERA--GDRSFGEERGDG-AEVSRDTRTV 386
            MEKEEEERQ LLKTMSRTERR  R+AS   ++  G N                 ASLVEDGVLFRPGPTAIRLRTAKQMQL VAR                                       G L VKRRA Y SDG AA AGR  G  +VLEVNRTG XXXXXXXXXXX     +GEGRPNMIFTPSL PVGM+SVR+ PM+LG   G G   SVRW  E  E A   + S GE  G+G ++  RDTRTV
Sbjct:    1 MEKEEEERQALLKTMSRTERRHGRIASFKASSGHGNNSNSPGRARQEQSAAAMTASLVEDGVLFRPGPTAIRLRTAKQMQLAVARRRQGCNGDGGSGNEVDTPDYYLTGGEAQGLHPSSTPTAGGPLVVKRRA-YSSDGTAATAGRAGG--LVLEVNRTGXXXXXXXXXXXXRSVPGAGEGRPNMIFTPSLAPVGMESVRSCPMSLGSG-GLGQTSSVRWAPETMESAVAAEDSLGEGGGEGVSQALRDTRTV 249          
BLAST of mRNA_L-elsbetiae_contig1769.5002.1 vs. uniprot
Match: A0A7S2FTG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FTG8_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 5.830e-14
Identity = 64/167 (38.32%), Postives = 94/167 (56.29%), Query Frame = 0
Query:    1 MKAADYRIPWGRPSEHLLAVKREIIGQQLHVRRVRDARNRSTIDTESPECAHMPHLITRPKKKKMQEDRQRDIATENYSLMHRLAGIMKEERGDPVQKFA--HLSVEYRESLRRKKLLKLETENRRLARSIRKQKPFYPNRAMEKEEEERQTLLKTMSRTERRKERV 165
            MKA DY +PWGRPSE ++A KRE    +L+ +R+ + +  S ID  +P  A   HL  R KKK++  DRQ  I  EN  L+ ++A I++ + G  V   A   L+    E +RRK+L K+  ENR +A  IR+Q P Y +  M  +        K +SRT +R +R+
Sbjct:    1 MKAVDYCVPWGRPSEDVIARKRERQSARLNKQRLNNIK--SMIDCSAP--AVPKHLANRQKKKQLAVDRQHVIDIENAKLVEKMARILRGQ-GPKVCGDAPFRLTGSKNEPIRRKELEKISNENRAIAARIRQQAPNYDHFKMADDYHVSTGYAKNISRTFKRDQRI 162          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1769.5002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEI6_ECTSI8.310e-4553.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2FTG8_9STRA5.830e-1438.32Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 141..161
NoneNo IPR availablePANTHERPTHR23035:SF2coord: 14..193
IPR029488Hemingway/CFAP97D1PFAMPF13879KIAA1430coord: 30..128
e-value: 5.8E-11
score: 43.1
IPR038791Cilia- and flagella-associated protein 97PANTHERPTHR23035UNCHARACTERIZEDcoord: 14..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1769contigL-elsbetiae_contig1769:13971..16481 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1769.5002.1mRNA_L-elsbetiae_contig1769.5002.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1769 13971..16481 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1769.5002.1 ID=prot_L-elsbetiae_contig1769.5002.1|Name=mRNA_L-elsbetiae_contig1769.5002.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=387bp
MKAADYRIPWGRPSEHLLAVKREIIGQQLHVRRVRDARNRSTIDTESPEC
AHMPHLITRPKKKKMQEDRQRDIATENYSLMHRLAGIMKEERGDPVQKFA
HLSVEYRESLRRKKLLKLETENRRLARSIRKQKPFYPNRAMEKEEEERQT
LLKTMSRTERRKERVASGLKATASGRNSNNNQHHHQQQPQQSAASLVEDG
VLFRPGPTAIRLRTAKQMQLEVARRRRGGGGGGEDQQELFSSGRGGPRGL
LSSSSSTAAAGSLTVKRRASYGSDGPAALAGRGEGRGVVLEVNRTGGGGG
WRRSGGGGRRRAASGEGRPNMIFTPSLVPVGMDSVRARPMTLGGAEGAGV
VGSVRWEGEATERAGDRSFGEERGDGAEVSRDTRTV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029488Hmw/CFAP97D1
IPR038791Cfap97/Hemingway