prot_L-elsbetiae_contig1768.4997.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1768.4997.1
Unique Nameprot_L-elsbetiae_contig1768.4997.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length446
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1768.4997.1 vs. uniprot
Match: A0A6H5JVV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVV3_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 3.750e-5
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0 
Query:    5 RRPGWCTHGGCNKHPSYGVEGSKTVECCADHKREGMVNVKNKRRRHP 51
            +R   C +  CNK PS+GVEG+KTV+ C  H R GMVN+KN+R  +P
Sbjct:  135 KRRSTCKNPCCNKTPSFGVEGTKTVQFCYSHARSGMVNLKNRRCENP 181
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1768.4997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JVV3_9PHAE3.750e-553.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1768contigL-elsbetiae_contig1768:6998..8899 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1768.4997.1mRNA_L-elsbetiae_contig1768.4997.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1768 6806..10560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1768.4997.1 ID=prot_L-elsbetiae_contig1768.4997.1|Name=mRNA_L-elsbetiae_contig1768.4997.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=446bp
MDKERRPGWCTHGGCNKHPSYGVEGSKTVECCADHKREGMVNVKNKRRRH
PVCNIEIPSYGVEGSKTVEFCAGHEKGGMVDVKNKRCGHPGCNKHPLYGV
EGSKTREFCAKHAKEGMVDVARKTCARPGCNKRPSYGVEGSKTREFCAGH
AKEGMVDVSRKTCAHPGCNKRPSYGVGDSKTVEFCADHKKEGMVNVVDKN
CAHPGCNKLPSYGVEGSKTREVCAEHKEEGTVNVIAKRCGHPSCNKHPSY
GVEGSKTVEFCAEHKEEGMVNVVSKRCGHPGCNKRPSYGVEGSKTVEFCA
EHKEEGMVNLVNKRCGHPGCNKRPSYGMEGSKTVEFCAGHANEGMLTNPR
PGRVLGRETSSGQSEGSAINRAVVPVGEERKPKGLALSTTAGETPSASKQ
ANTPAAVKVEGHMMMSALSGTAEAVRRTTGGHKKRRRTEAALTPP*
back to top