prot_L-elsbetiae_contig1764.4981.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1764.4981.1
Unique Nameprot_L-elsbetiae_contig1764.4981.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length372
Homology
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BLAST of mRNA_L-elsbetiae_contig1764.4981.1 vs. uniprot
Match: D8LC22_ECTSI (Glyco_transf_41 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC22_ECTSI)

HSP 1 Score: 421 bits (1081), Expect = 3.120e-136
Identity = 238/359 (66.30%), Postives = 264/359 (73.54%), Query Frame = 0 
Query:    4 RVSGSCDLFVDSFLYGAHTTAADALWAGLPLLTLRGYGVDDTPVGQMSGRVGTSLLSALGLPELSFHSAKELEDAAVALVQSPGRLATLRKRLLSMAMKSPLFDTRLVTKNLERAYEAMWEQRALGLASSHIVVDPTQGELPPLQLEPEEPWTDSRSGGGVASRVRSEDAGEVGEEGGQTTVAANEMVSRAVEKAVAWEETGTQRGAEAALTVTGRLLAENPLSVEALHLRGVALYLLGRRTEATAVMERAALLATSTKHEQPHLDLHLLWGNLDAAQQVATEEGGQRYSPMR---PLLKALVVSPSQ-PTPLYFLLWIHLRSGDHAACASDFWKHWAKMRGYRPPPGTISRAAGSASE 358
            RVSGSCDLFVDSF+YGAHTTAADALWAGLPLLTLRGYGVDDTP GQMSGRVGTSLLSALGL ELSFHS K+LE+AAVALVQSPGRLATLRKRLLS AM SPLFDTRL T+NLERAYEAMWEQR LGL  SHIVVDPTQG LPPL+L  +E      SG   +SR    + G + + G Q T AA  MV+RAVE A+ W ETGT  G E ALT TGRLLA +PLS +ALH+RGVAL+ LGR TE    MERAALLATS K ++P LD+ +LW NLDAAQ    E  G  + P     P LK L VSPS+ PTPL  +L  + R GDH ACA  FWKHW  +R  R  PG    +AG   E
Sbjct:   22 RVSGSCDLFVDSFVYGAHTTAADALWAGLPLLTLRGYGVDDTPAGQMSGRVGTSLLSALGLDELSFHSVKDLENAAVALVQSPGRLATLRKRLLSRAMNSPLFDTRLTTRNLERAYEAMWEQRELGLPPSHIVVDPTQGALPPLRLPFDEDDDSLPSG---SSRGAPWNRG-INDAGDQVTTAAKGMVARAVEAAMVWVETGTTEGVEDALTATGRLLAGDPLSAQALHMRGVALHFLGRSTEGVVFMERAALLATSGKLKEPGLDVAMLWRNLDAAQHAIAEGDGLSFPPETTNAPFLKGLAVSPSRLPTPLLIVLRRYWRRGDHTACAGAFWKHWPGLR--RHLPGGAVESAGERRE 374
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BLAST of mRNA_L-elsbetiae_contig1764.4981.1 vs. uniprot
Match: UPI001E531AC4 (hypothetical protein n=1 Tax=Bradyrhizobium altum TaxID=1571202 RepID=UPI001E531AC4)

HSP 1 Score: 117 bits (293), Expect = 1.260e-27
Identity = 66/127 (51.97%), Postives = 82/127 (64.57%), Query Frame = 0 
Query:   11 LFVDSFLYGAHTTAADALWAGLPLLTLRGYGVDDTPVGQMSGRVGTSLLSALGLPELSFHSAKELEDAAVALVQSPGRLATLRKRLLSMAMKSPLFDTRLVTKNLERAYEAMWEQRALGLASSHIVV 137
            LF+DS  Y AHTTA+DALWAGLP+LT+ G    DT     +GRV  SLL A+GLPEL   S +  E  AV L   P RLA LR RL +  + +PLFDTR  T+++E AY AM+E+   G+   HIVV
Sbjct:   84 LFLDSTPYNAHTTASDALWAGLPVLTILG----DT----FAGRVAASLLHAIGLPELVAESPEAYERMAVDLATDPSRLAALRTRLAANRLTAPLFDTRRFTRHIEAAYTAMYERHRAGITPDHIVV 202
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BLAST of mRNA_L-elsbetiae_contig1764.4981.1 vs. uniprot
Match: A0A4P7YIS8_9PROT (Tetratricopeptide repeat protein n=2 Tax=Azospirillum TaxID=191 RepID=A0A4P7YIS8_9PROT)

HSP 1 Score: 121 bits (304), Expect = 1.900e-26
Identity = 72/144 (50.00%), Postives = 83/144 (57.64%), Query Frame = 0 
Query:   10 DLFVDSFLYGAHTTAADALWAGLPLLTLRGYGVDDTPVGQMSGRVGTSLLSALGLPELSFHSAKELEDAAVALVQSPGRLATLRKRLLSMAMKSPLFDTRLVTKNLERAYEAMWEQRALGLASSHIVVDPTQGELPPLQLEPEE 153
            DLF+D+  Y AHTTA+DALWAGLP+LT RG           +GRV  SLL A GLPEL   S +E E AAVAL +SP RL  LR+RL       PLFDT   T+NLE AY  MW+    G A  HI V    G   P +  P E
Sbjct:  738 DLFLDTLPYNAHTTASDALWAGLPVLTRRGTA--------FAGRVAASLLLAAGLPELIVDSQEEYEAAAVALARSPDRLRALRERLAGNRPTCPLFDTPRFTRNLETAYRTMWDIHRSGSAPRHIAVA-ADGTAGPAETNPAE 872
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BLAST of mRNA_L-elsbetiae_contig1764.4981.1 vs. uniprot
Match: A0A8B5X7M5_9GAMM (Uncharacterized protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A8B5X7M5_9GAMM)

HSP 1 Score: 117 bits (294), Expect = 2.300e-26
Identity = 63/135 (46.67%), Postives = 83/135 (61.48%), Query Frame = 0 
Query:   10 DLFVDSFLYGAHTTAADALWAGLPLLTLRGYGVDDTPVGQMSGRVGTSLLSALGLPELSFHSAKELEDAAVALVQSPGRLATLRKRLLSMAMKSPLFDTRLVTKNLERAYEAMWEQRALGLASSHIVVDPTQGEL 144
            DLF+D+ +Y AHTTA+DALWAG+P+LT  G        G    RV  SLL A+GLPEL  HS +E E+ AV L   P  LA LR++L    +++ LFDT    ++LERAYE MWE+R  GL  + + V    G +
Sbjct:  228 DLFLDTRIYNAHTTASDALWAGVPVLTCLG--------GTFPARVAASLLQAVGLPELISHSLEEYEEQAVRLATQPTELAGLREKLAHNRLRTSLFDTERFARHLERAYEMMWERRVRGLPPASLQVPALPGSV 354
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BLAST of mRNA_L-elsbetiae_contig1764.4981.1 vs. uniprot
Match: A0A356VIP1_9GAMM (Glyco_transf_41 domain-containing protein n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A356VIP1_9GAMM)

HSP 1 Score: 115 bits (288), Expect = 2.940e-26
Identity = 66/141 (46.81%), Postives = 87/141 (61.70%), Query Frame = 0 
Query:    7 GSCDLFVDSFLYGAHTTAADALWAGLPLLTLRGYGVDDTPVGQMSGRVGTSLLSALGLPELSFHSAKELEDAAVALVQSPGRLATLRKRLLSMAMKSPLFDTRLVTKNLERAYEAMWEQRALGLASSHIVVDPTQGELPPL 147
            G+ DLF+D++   AHTTA+DALWAGLPLLTL+G           +GRV  SLL AL LPEL   + ++ E  A+A+  +P  LA LR+RL      S LFD R + +NLE AY AM+E+   GLA + + VD  QG   P+
Sbjct:  127 GAADLFLDTWPCNAHTTASDALWAGLPLLTLQGE--------SFAGRVAASLLRALQLPELIATTVEDYEQCAIAMAGNPAGLARLRERLARQKGHSALFDGRAMARNLEAAYRAMYERHRAGLAPTPLAVD-AQGHCEPV 258
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BLAST of mRNA_L-elsbetiae_contig1764.4981.1 vs. uniprot
Match: A0A3P3E2I1_9BURK (Glycosyltransferase family 41 protein n=3 Tax=Variovorax beijingensis TaxID=2496117 RepID=A0A3P3E2I1_9BURK)

HSP 1 Score: 119 bits (299), Expect = 7.140e-26
Identity = 64/128 (50.00%), Postives = 80/128 (62.50%), Query Frame = 0 
Query:   10 DLFVDSFLYGAHTTAADALWAGLPLLTLRGYGVDDTPVGQMSGRVGTSLLSALGLPELSFHSAKELEDAAVALVQSPGRLATLRKRLLSMAMKSPLFDTRLVTKNLERAYEAMWEQRALGLASSHIVV 137
            DLF+D+F Y AHTT +DALWAGLP+LTL G           + RV  SLL+ +GLPEL   S    E  A+AL  SP +LA LR+RL     ++PLFDT L  K +E A+EAMW++  LGL   HI V
Sbjct:  574 DLFLDTFHYNAHTTCSDALWAGLPVLTLAGR--------TFASRVAASLLNTIGLPELVTRSVDSYEALALALATSPAKLAALRRRLHGNRTETPLFDTPLFAKRIEAAFEAMWDRHRLGLPPDHIHV 693
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BLAST of mRNA_L-elsbetiae_contig1764.4981.1 vs. uniprot
Match: UPI001B264CEC (Tetratricopeptide repeat protein n=1 Tax=Variovorax sp. TaxID=1871043 RepID=UPI001B264CEC)

HSP 1 Score: 119 bits (298), Expect = 9.740e-26
Identity = 64/126 (50.79%), Postives = 79/126 (62.70%), Query Frame = 0 
Query:   10 DLFVDSFLYGAHTTAADALWAGLPLLTLRGYGVDDTPVGQMSGRVGTSLLSALGLPELSFHSAKELEDAAVALVQSPGRLATLRKRLLSMAMKSPLFDTRLVTKNLERAYEAMWEQRALGLASSHI 135
            DLF+D+F Y AHTTAADALW+GLP+LTL G             RVG SLL A+GL EL      + E  A++L +SP RLA LR+RL       PLFD+ L  + LE A+EAMWE+RA GL   H+
Sbjct:  577 DLFLDTFHYNAHTTAADALWSGLPVLTLAG--------ATFPSRVGASLLRAIGLQELVTQEVADYEALAISLARSPERLAQLRRRLADHRTAMPLFDSALFARRLEAAFEAMWERRAEGLPPDHL 694
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BLAST of mRNA_L-elsbetiae_contig1764.4981.1 vs. uniprot
Match: A0A1J4RUW3_9BACT (Glyco_transf_41 domain-containing protein n=1 Tax=Candidatus Beckwithbacteria bacterium CG1_02_47_37 TaxID=1805034 RepID=A0A1J4RUW3_9BACT)

HSP 1 Score: 111 bits (277), Expect = 1.010e-25
Identity = 57/128 (44.53%), Postives = 77/128 (60.16%), Query Frame = 0 
Query:   10 DLFVDSFLYGAHTTAADALWAGLPLLTLRGYGVDDTPVGQMSGRVGTSLLSALGLPELSFHSAKELEDAAVALVQSPGRLATLRKRLLSMAMKSPLFDTRLVTKNLERAYEAMWEQRALGLASSHIVV 137
            DL +D+F Y  HTT +D LWAG+P++TL+G           + RV  SLL+A+GLPEL  HS +E E  A+ L  SP +LAT+ + L+      PLFDT+  T NLE+AY+ +W     G    HIVV
Sbjct:   47 DLSLDTFTYNGHTTTSDCLWAGVPVVTLKG--------NHFASRVSASLLTAIGLPELITHSPEEYEKLAIDLASSPKKLATIHESLILNRESCPLFDTKKFTTNLEKAYQLIWNNYLSGKNPQHIVV 166
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BLAST of mRNA_L-elsbetiae_contig1764.4981.1 vs. uniprot
Match: A0A3C1NT38_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A3C1NT38_9GAMM)

HSP 1 Score: 115 bits (288), Expect = 1.220e-25
Identity = 66/141 (46.81%), Postives = 87/141 (61.70%), Query Frame = 0 
Query:    7 GSCDLFVDSFLYGAHTTAADALWAGLPLLTLRGYGVDDTPVGQMSGRVGTSLLSALGLPELSFHSAKELEDAAVALVQSPGRLATLRKRLLSMAMKSPLFDTRLVTKNLERAYEAMWEQRALGLASSHIVVDPTQGELPPL 147
            G+ DLF+D++   AHTTA+DALWAGLPLLTL+G           +GRV  SLL AL LPEL   + ++ E  A+A+  +P  LA LR+RL      S LFD R + +NLE AY AM+E+   GLA + + VD  QG   P+
Sbjct:  199 GAADLFLDTWPCNAHTTASDALWAGLPLLTLQGE--------SFAGRVAASLLRALQLPELIATTVEDYEQCAIAMAGNPAGLARLRERLARQKGHSALFDGRAMARNLEAAYRAMYERHRAGLAPTPLAVD-AQGHCEPV 330
[Close]
BLAST of mRNA_L-elsbetiae_contig1764.4981.1 vs. uniprot
Match: UPI00145CDF06 (tetratricopeptide repeat protein n=1 Tax=Candidatus Competibacter phosphatis TaxID=221280 RepID=UPI00145CDF06)

HSP 1 Score: 119 bits (297), Expect = 1.570e-25
Identity = 65/136 (47.79%), Postives = 83/136 (61.03%), Query Frame = 0 
Query:   10 DLFVDSFLYGAHTTAADALWAGLPLLTLRGYGVDDTPVGQMSGRVGTSLLSALGLPELSFHSAKELEDAAVALVQSPGRLATLRKRLLSMAMKSPLFDTRLVTKNLERAYEAMWEQRALGLASSHIVVDPTQGELP 145
            DLF+D+ +YGAHTTA+DALWAGLP+LT  G             RV  SLL A+GLPEL  +S  E E+ AV L   P  LA LR +L+   +++PLFDT   T++LERAYE MWE+   GL  + + V    G  P
Sbjct:  777 DLFLDTHIYGAHTTASDALWAGLPVLTCLGEA--------FPARVAASLLHAVGLPELITYSLAEYEERAVRLATQPTELAALRDKLVYNRLRTPLFDTERFTRHLERAYELMWERDVQGLPPAPLHVSALPGREP 904
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1764.4981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC22_ECTSI3.120e-13666.30Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
UPI001E531AC41.260e-2751.97hypothetical protein n=1 Tax=Bradyrhizobium altum ... [more]
A0A4P7YIS8_9PROT1.900e-2650.00Tetratricopeptide repeat protein n=2 Tax=Azospiril... [more]
A0A8B5X7M5_9GAMM2.300e-2646.67Uncharacterized protein n=1 Tax=Candidatus Competi... [more]
A0A356VIP1_9GAMM2.940e-2646.81Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
A0A3P3E2I1_9BURK7.140e-2650.00Glycosyltransferase family 41 protein n=3 Tax=Vari... [more]
UPI001B264CEC9.740e-2650.79Tetratricopeptide repeat protein n=1 Tax=Variovora... [more]
A0A1J4RUW3_9BACT1.010e-2544.53Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
A0A3C1NT38_9GAMM1.220e-2546.81Uncharacterized protein (Fragment) n=1 Tax=Halieac... [more]
UPI00145CDF061.570e-2547.79tetratricopeptide repeat protein n=1 Tax=Candidatu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 182..361
e-value: 1.1E-6
score: 30.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 210..329
IPR029489O-GlcNAc transferase, C-terminalPFAMPF13844Glyco_transf_41coord: 9..123
e-value: 9.6E-17
score: 60.6
NoneNo IPR availableGENE3D3.40.50.2000coord: 9..102
e-value: 5.1E-28
score: 99.6
NoneNo IPR availableGENE3D3.40.50.11380coord: 103..136
e-value: 5.1E-28
score: 99.6
NoneNo IPR availablePANTHERPTHR44998FAMILY NOT NAMEDcoord: 6..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1764contigL-elsbetiae_contig1764:17549..21366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1764.4981.1mRNA_L-elsbetiae_contig1764.4981.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1764 17549..21367 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1764.4981.1 ID=prot_L-elsbetiae_contig1764.4981.1|Name=mRNA_L-elsbetiae_contig1764.4981.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=372bp
PSKRVSGSCDLFVDSFLYGAHTTAADALWAGLPLLTLRGYGVDDTPVGQM
SGRVGTSLLSALGLPELSFHSAKELEDAAVALVQSPGRLATLRKRLLSMA
MKSPLFDTRLVTKNLERAYEAMWEQRALGLASSHIVVDPTQGELPPLQLE
PEEPWTDSRSGGGVASRVRSEDAGEVGEEGGQTTVAANEMVSRAVEKAVA
WEETGTQRGAEAALTVTGRLLAENPLSVEALHLRGVALYLLGRRTEATAV
MERAALLATSTKHEQPHLDLHLLWGNLDAAQQVATEEGGQRYSPMRPLLK
ALVVSPSQPTPLYFLLWIHLRSGDHAACASDFWKHWAKMRGYRPPPGTIS
RAAGSASEQQGHGTQREGASPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR029489OGT/SEC/SPY_C