prot_L-elsbetiae_contig17594.4961.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17594.4961.1
Unique Nameprot_L-elsbetiae_contig17594.4961.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length105
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig17594.4961.1 vs. uniprot
Match: D8LM78_ECTSI (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM78_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.600e-15
Identity = 43/52 (82.69%), Postives = 43/52 (82.69%), Query Frame = 0 
Query:   54 KRSTRRPSSPPSENLGNLGVFKVLGEAFMRRFNCYSDQVSAAFDRVSDIKVV 105
            KR    P S  SEN GNLGVFKVLGEAFMRRFN YSDQVSAAFDRVSDIKVV
Sbjct:  485 KRKKAAPLSS-SENHGNLGVFKVLGEAFMRRFNAYSDQVSAAFDRVSDIKVV 535
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17594.4961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM78_ECTSI2.600e-1582.69Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17594contigL-elsbetiae_contig17594:326..1242 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17594.4961.1mRNA_L-elsbetiae_contig17594.4961.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17594 324..1242 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17594.4961.1 ID=prot_L-elsbetiae_contig17594.4961.1|Name=mRNA_L-elsbetiae_contig17594.4961.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=105bp
SQSVTTAVGGALRGEARNKLAPWSASRAGSGGGGGGPHTPGDRARSVSLS
VRPKRSTRRPSSPPSENLGNLGVFKVLGEAFMRRFNCYSDQVSAAFDRVS
DIKVV
back to top