prot_L-elsbetiae_contig17517.4931.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17517.4931.1
Unique Nameprot_L-elsbetiae_contig17517.4931.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length262
Homology
BLAST of mRNA_L-elsbetiae_contig17517.4931.1 vs. uniprot
Match: A0A6H5JD00_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD00_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 1.180e-83
Identity = 124/170 (72.94%), Postives = 141/170 (82.94%), Query Frame = 0
Query:    2 NTDQVPLGFVNGQGTTWEVKGAQRVHVGQPFPGLEKRQCTVQPTIGPGGKIMRCAIIFRGKGNGISKVEREAYDERVDVYFQPKAWADSQFCMEWLKRSFRPSLMAPDGKVPKEQSVLLADNLHAQTTEPFREYLFKECNTLLWLLPAYMTDMLQPLNAGYGYRFKVLVG 171
            N DQVPLGFV GQ  TW+ +GA+RVHVGQPFPGLEKRQCTVQPT G GGK  RCA IFRGKG GI+KVE+ AYD+R+DV+FQPKAWADS FCM+WL+RSFRPS M  DGKVP+EQS+LLADNLH QTTE FR+Y  +ECNT  W LPA  TD +QP++AGYG R KV VG
Sbjct:   18 NADQVPLGFVTGQEDTWDKRGAKRVHVGQPFPGLEKRQCTVQPTTGAGGKKTRCATIFRGKGTGITKVEKAAYDKRLDVFFQPKAWADSDFCMQWLERSFRPSRMV-DGKVPEEQSLLLADNLHGQTTEEFRKY--EECNTFFWHLPAGCTDEVQPIDAGYGRRLKVAVG 184          
BLAST of mRNA_L-elsbetiae_contig17517.4931.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 1.170e-80
Identity = 128/173 (73.99%), Postives = 146/173 (84.39%), Query Frame = 0
Query:    1 MNTDQVPLGFVNGQGTTWEVKGAQRVHVGQPFPGLEKRQCTVQPTIGPGGKIMRCAIIFRGKGNGISKVEREAYDERVDVYFQPKAWADSQFCMEWLKRSFRPSLMAPDG-KVPKEQSVLLADNLHAQTTEPFREYLFKECNTLLWLLPAYMTDMLQPLNAGYGYRFKVLVGK 172
            +NTDQVP GFVNGQ  +WE  GA+RVH+ QPFPGLEKRQCTVQPT GPGGK+M+CAIIFRGKG GISKVE+ AYD+RVDV+FQPKAWAD  FCM+WL+R FRPSLMA  G KVP  Q+VLLADNLH QTTE FR+YL+KECNTLLWLLPA  TD LQP++AG G R K  +G+
Sbjct: 1546 LNTDQVPTGFVNGQVDSWEQTGARRVHIMQPFPGLEKRQCTVQPTFGPGGKVMKCAIIFRGKGTGISKVEKAAYDKRVDVFFQPKAWADDNFCMQWLERCFRPSLMAASGGKVPDAQTVLLADNLHGQTTEKFRKYLYKECNTLLWLLPAGCTDELQPVDAGMGRRMKTGMGR 1718          
BLAST of mRNA_L-elsbetiae_contig17517.4931.1 vs. uniprot
Match: A0A6H5JW14_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW14_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 2.490e-62
Identity = 109/192 (56.77%), Postives = 128/192 (66.67%), Query Frame = 0
Query:    2 NTDQVPLGFVNGQGTTWEVKGAQRVHVGQPFPGLEKRQCTVQPTIGPGGKIMRCAIIFRGKGNGISKVEREAYDERVDVYFQPKAWADSQFCMEWLKRSFRPSLMAPDGKVPKEQSVLLADNLHAQTTEPFREYLFKECNTLLWLLPAYMTDMLQPLNAGYGYRFKVLVGKA---------ARLVARVGREP 184
            N DQV L FVNG  +TW+  GA RV +GQPFPGLEKRQCTV   IG G K+MR  +IFRGKG  +S VE+ AYD  VDV FQ  AW D   CM W K SF  S+   +G VP+EQS+L ADNLHAQTT+ F+++L  ECNTLL LLP  +TD LQP++AGYG   KV V  A         AR VAR+G  P
Sbjct:   63 NVDQVGLAFVNGLDSTWDETGALRVQIGQPFPGLEKRQCTVNCFIGAGDKLMRTVVIFRGKGK-VSAVEKAAYDPGVDVLFQENAWMDGPTCMAWAKNSFLRSIKGEEGVVPEEQSILFADNLHAQTTDEFKKFLHGECNTLLRLLPPKLTDELQPVDAGYGRLLKVEVAGARRILFTRFTARAVARMGARP 253          
BLAST of mRNA_L-elsbetiae_contig17517.4931.1 vs. uniprot
Match: A0A6H5JFR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR9_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 1.040e-60
Identity = 100/171 (58.48%), Postives = 122/171 (71.35%), Query Frame = 0
Query:    2 NTDQVPLGFVNGQGTTWEVKGAQRVHVGQPFPGLEKRQCTVQPTIGPGGKIMRCAIIFRGKGNGISKVEREAYDERVDVYFQPKAWADSQFCMEWLKRSFRPSLMAPDGKVPKEQSVLLADNLHAQTTEPFREYLFKECNTLLWLLPAYMTDMLQPLNAGYGYRFKVLVGK 172
            N DQV L FVNG   TW+ +GA RV + QPFPGLEKRQCT+Q   GPG K MR ++IFRG G  IS VE+ AY E VDV+FQ  AWAD +FCMEW KRS+R  LM   G++PK  S+L+ DNLHAQTT+ F+EYL K CNTL W  P+  TD +QP++AG G   KV +G+
Sbjct:  310 NVDQVSLAFVNGLLDTWDKRGALRVAISQPFPGLEKRQCTMQVNFGPGEKTMRISVIFRGMGKRISPVEKAAYHEDVDVFFQENAWADQKFCMEWAKRSYREGLMRGRGELPKAWSILIMDNLHAQTTDEFKEYLAKHCNTLAWYGPSECTDEVQPVDAGAGRFLKVEIGR 480          
BLAST of mRNA_L-elsbetiae_contig17517.4931.1 vs. uniprot
Match: A0A6H5KH13_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH13_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 2.620e-60
Identity = 99/170 (58.24%), Postives = 123/170 (72.35%), Query Frame = 0
Query:    2 NTDQVPLGFVNGQGTTWEVKGAQRVHVGQPFPGLEKRQCTVQPTIGPGGKIMRCAIIFRGKGNGISKVEREAYDERVDVYFQPKAWADSQFCMEWLKRSFRPSLMAPDGKVPKEQSVLLADNLHAQTTEPFREYLFKECNTLLWLLPAYMTDMLQPLNAGYGYRFKVLVG 171
            N DQVPL FVNG  +TWE  GA RV V QPF GL KR+CT+Q   GPG K MR ++IFRG+G  IS VE+ AY + VDV+FQ  AWAD +FCMEW KRS+R  L+   G++PK +S+L+ DNLHAQTT+ F+ YL K+CNT+ WL PA  TD +QP++AG G   KV VG
Sbjct:  148 NVDQVPLPFVNGLISTWEKTGALRVAVSQPFAGLGKRKCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLHAQTTDEFKGYLAKQCNTIAWLGPAECTDEVQPVDAGAGRFLKVEVG 317          
BLAST of mRNA_L-elsbetiae_contig17517.4931.1 vs. uniprot
Match: A0A6H5JKG3_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG3_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 7.600e-60
Identity = 100/170 (58.82%), Postives = 124/170 (72.94%), Query Frame = 0
Query:    2 NTDQVPLGFVNGQGTTWEVKGAQRVHVGQPFPGLEKRQCTVQPTIGPGGKIMRCAIIFRGKGNGISKVEREAYDERVDVYFQPKAWADSQFCMEWLKRSFRPSLMAPDGKVPKEQSVLLADNLHAQTTEPFREYLFKECNTLLWLLPAYMTDMLQPLNAGYGYRFKVLVG 171
            N DQVPL FVNG  +TWE  GA RV + QPF GLEKRQCT+Q   GPG K MR ++IFRG+G  IS VE+ AY + VDV+FQ  AWAD +FCMEW KRS+R  L+   G++PK +S+L+ DNLHAQTT+ F+ YL K+CNT+ WL PA  TD +QP++AG G   KV VG
Sbjct:  310 NVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLHAQTTDEFKGYLAKQCNTIAWLGPAECTDEVQPVDAGAGRFLKVEVG 479          
BLAST of mRNA_L-elsbetiae_contig17517.4931.1 vs. uniprot
Match: A0A6H5KZ92_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ92_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 4.870e-59
Identity = 98/170 (57.65%), Postives = 122/170 (71.76%), Query Frame = 0
Query:    2 NTDQVPLGFVNGQGTTWEVKGAQRVHVGQPFPGLEKRQCTVQPTIGPGGKIMRCAIIFRGKGNGISKVEREAYDERVDVYFQPKAWADSQFCMEWLKRSFRPSLMAPDGKVPKEQSVLLADNLHAQTTEPFREYLFKECNTLLWLLPAYMTDMLQPLNAGYGYRFKVLVG 171
            N DQVPL FVNG  +TWE  GA RV + QPF GLEKRQCT+Q   GPG K MR  +I RG+G  IS VE+ AY + VDV+FQ  AWAD +FCMEW KRS+R  L+   G++PK +S+L+ DNLHAQTT+ F+ YL K+CNT+ WL PA  TD +QP++AG G   +V VG
Sbjct:  338 NVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRILVILRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLHAQTTDEFKGYLAKQCNTIAWLGPAQCTDEVQPVDAGAGRFLEVEVG 507          
BLAST of mRNA_L-elsbetiae_contig17517.4931.1 vs. uniprot
Match: A0A6H5KDV1_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV1_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 5.040e-59
Identity = 99/170 (58.24%), Postives = 124/170 (72.94%), Query Frame = 0
Query:    2 NTDQVPLGFVNGQGTTWEVKGAQRVHVGQPFPGLEKRQCTVQPTIGPGGKIMRCAIIFRGKGNGISKVEREAYDERVDVYFQPKAWADSQFCMEWLKRSFRPSLMAPDGKVPKEQSVLLADNLHAQTTEPFREYLFKECNTLLWLLPAYMTDMLQPLNAGYGYRFKVLVG 171
            N DQVPL FVNG  +TWE  GA RV + QPF GLEKRQCT+Q   GPG K MR ++IFRG+G  IS VE+ AY + VDV+FQ  AWAD +FCMEW KRS+R  L+   G++PK +S+L+ DNL+AQTT+ F+ YL K+CNT+ WL PA  TD +QP++AG G   KV VG
Sbjct:  378 NVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLYAQTTDEFKGYLAKQCNTIAWLGPADCTDEVQPVDAGAGRLLKVEVG 547          
BLAST of mRNA_L-elsbetiae_contig17517.4931.1 vs. uniprot
Match: A0A6H5JFX9_9PHAE (C2H2-type domain-containing protein n=15 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX9_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 1.060e-58
Identity = 100/170 (58.82%), Postives = 124/170 (72.94%), Query Frame = 0
Query:    2 NTDQVPLGFVNGQGTTWEVKGAQRVHVGQPFPGLEKRQCTVQPTIGPGGKIMRCAIIFRGKGNGISKVEREAYDERVDVYFQPKAWADSQFCMEWLKRSFRPSLMAPDGKVPKEQSVLLADNLHAQTTEPFREYLFKECNTLLWLLPAYMTDMLQPLNAGYGYRFKVLVG 171
            N DQVPL FVNG  +TWE  GA RV + QPF GLEKRQCT+Q   GPG K MR ++IFRG+G  IS VE+ AY + VDV+FQ  AWAD +FCMEW KRS+R  L+   G++PK +S+L+ DNLHAQTT+ F+ YL K+CNT+ WL PA  TD +QP++AG G   KV VG
Sbjct:  492 NVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLHAQTTDEFKGYLAKQCNTIAWLGPAECTDEVQPVDAGAGRFLKVEVG 661          
BLAST of mRNA_L-elsbetiae_contig17517.4931.1 vs. uniprot
Match: A0A6H5K7A3_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7A3_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 2.280e-58
Identity = 99/171 (57.89%), Postives = 121/171 (70.76%), Query Frame = 0
Query:    2 NTDQVPLGFVNGQGTTWEVKGAQRVHVGQPFPGLEKRQCTVQPTIGPGGKIMRCAIIFRGKGNGISKVEREAYDERVDVYFQPKAWADSQFCMEWLKRSFRPSLMAPDGKVPKEQSVLLADNLHAQTTEPFREYLFKECNTLLWLLPAYMTDMLQPLNAGYGYRFKVLVGK 172
            N DQV L FVNG   TW+ +GA RV + QP  GLEKRQCT+Q   GPG K MR ++IFRG G  IS VE+ AY E VDV+FQ  AWAD +FCMEW KRS+R  LM   G++PK +S+L+ DNLHAQTT+ F+EYL K CNTL W  P+  TD +QP++AG G   KV VG+
Sbjct:  329 NVDQVSLAFVNGLLDTWDKRGALRVAISQPLVGLEKRQCTMQVIFGPGEKTMRISVIFRGTGKRISPVEKAAYHEDVDVFFQENAWADQKFCMEWAKRSYREGLMRGRGELPKARSILIMDNLHAQTTDEFKEYLAKHCNTLAWYGPSECTDEVQPVDAGAGRFLKVEVGR 499          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17517.4931.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JD00_9PHAE1.180e-8372.94DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JH58_9PHAE1.170e-8073.99Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JW14_9PHAE2.490e-6256.77DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JFR9_9PHAE1.040e-6058.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KH13_9PHAE2.620e-6058.24DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JKG3_9PHAE7.600e-6058.82DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KZ92_9PHAE4.870e-5957.65DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5KDV1_9PHAE5.040e-5958.24C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JFX9_9PHAE1.060e-5858.82C2H2-type domain-containing protein n=15 Tax=Ectoc... [more]
A0A6H5K7A3_9PHAE2.280e-5857.89HTH CENPB-type domain-containing protein n=1 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 49..168
e-value: 4.9E-10
score: 39.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17517contigL-elsbetiae_contig17517:2016..2801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17517.4931.1mRNA_L-elsbetiae_contig17517.4931.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17517 1742..2884 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17517.4931.1 ID=prot_L-elsbetiae_contig17517.4931.1|Name=mRNA_L-elsbetiae_contig17517.4931.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=262bp
MNTDQVPLGFVNGQGTTWEVKGAQRVHVGQPFPGLEKRQCTVQPTIGPGG
KIMRCAIIFRGKGNGISKVEREAYDERVDVYFQPKAWADSQFCMEWLKRS
FRPSLMAPDGKVPKEQSVLLADNLHAQTTEPFREYLFKECNTLLWLLPAY
MTDMLQPLNAGYGYRFKVLVGKAARLVARVGREPRKVGNQRADSVGASCV
AYSLGGGGGHANRRGAGVPVSPLRKDGDSDDDGRDRGRPNQPRGPFRAVH
LLGCRGGEQPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom