prot_L-elsbetiae_contig1748.4911.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1748.4911.1
Unique Nameprot_L-elsbetiae_contig1748.4911.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length346
Homology
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BLAST of mRNA_L-elsbetiae_contig1748.4911.1 vs. uniprot
Match: A0A6H5KIX7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIX7_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 1.280e-101
Identity = 204/378 (53.97%), Postives = 227/378 (60.05%), Query Frame = 0 
Query:    3 TAMRGVGTKRPRGYVATAEEPPLPWAGRVPKPAMDADSFVDYGSGFLRKSCDSCVSSKRRCDGHDPCTRCLRRKKPCHYTERKKCGPRSGQKTTNKMRRLYTAET--------------------QLRXXXXXXTQPQHQRPNG-AHLHRTGVTGLAPVLGSSPP-AHRTPTLSAGDLSGDTTCVDHTDYSDNGLPSHRVLLRDESGSSWWSLEDQGAGAGGGLPTRLNGDGG----SWPQHEHHQLHRQGNSKVDDRGDGATGVGSAHFGFNELGHGGLWSGLHSSSTTGXXXXXXXXAGESWEEDDESEEGLGQAEEEVAALLVGLGKA-NEDFEGFSDDENDES--------GGSVSKPPTRQLSISTASQEWSV 345
            T +R VG KRPRGYVA AE+P LPWAGRVPKPAMDADSFVDYGSGFLRKSCDSCVSSKRRCDG DPCTRCLRRKKPCHYTERKKCGPRSGQKT N  RR     +                    + +       Q QH    G A    +  +   P +  S P A     L+ G+LSG+TTCVD TD SDNGLP HRVL RDESGSSWWSL+DQG GAG  +  RL+G       SWPQ E                      G  ++G       GLW GL S     XXXXXXXX  ESW  DD+SEEG GQ EEEVAALL+GLGK  NEDFEGFSDD+   +        G  + + P R L +S ASQE SV
Sbjct:    2 TTVRAVGAKRPRGYVAAAEKPTLPWAGRVPKPAMDADSFVDYGSGFLRKSCDSCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPRSGQKTGNGTRRQPAGTSPPDCAGSSGADARKQRRQFMEYQQRALRTQQQQHAAVGGLARAPASSASSRYPAVAHSRPLAPHASVLTTGELSGETTCVDQTDCSDNGLPPHRVLSRDESGSSWWSLDDQG-GAGAAVSARLSGVPALIPSSWPQREXXXXXXXXXXXXXXXXXXXV-AGVKNYGQRT----GLWGGLRSXXXXXXXXXXXXXXXESW--DDDSEEGQGQNEEEVAALLLGLGKTTNEDFEGFSDDDEQPAPERPVRPGGVGMFREPPRHLPVSNASQELSV 371
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BLAST of mRNA_L-elsbetiae_contig1748.4911.1 vs. uniprot
Match: A0A6H5K1B7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1B7_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 7.790e-6
Identity = 41/131 (31.30%), Postives = 65/131 (49.62%), Query Frame = 0 
Query:   47 GFLRKSCDSCVSSKRRCDGHDPCTRCLRRKKPCHYTERKKCGPRSGQKTTNKMRRLYTAETQLRXXXXXXTQPQHQRPNGAHLHRTGVTGLAPVLGSSPPAHRTPTLSAGDLSG-DTTCVDHTDYSDNGLP 176
            G LRKSCD+C SSK +C G  PC RC +R+  C +++R++CGP++  +   + R    A+ Q          P+H+     H    GV          PP+   P +  G ++G D++  + T    +GLP
Sbjct:   21 GPLRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKRPRTGMDAQQQA--GLAIKDSPEHKP--AMHQQHAGVP--------HPPSPSLPPI--GTIAGLDSSSNNMTGGGGDGLP 137
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BLAST of mRNA_L-elsbetiae_contig1748.4911.1 vs. uniprot
Match: K8YU74_NANGC (Tpa: zn 2cys6 transcription factor n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YU74_NANGC)

HSP 1 Score: 55.5 bits (132), Expect = 9.260e-5
Identity = 25/51 (49.02%), Postives = 31/51 (60.78%), Query Frame = 0 
Query:   40 SFVDYGSGFLRKSCDSCVSSKRRCDGHDPCTRCLRRKKPCHYTERKKCGPR 90
            S  D     LR+SCD C S K RCDG   C  C+RR   CHY+ER++ GP+
Sbjct:    3 SPTDRSRKKLRRSCDRCTSKKIRCDGLAACQNCVRRGYACHYSERRRTGPK 53
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1748.4911.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KIX7_9PHAE1.280e-10153.97Zn(2)-C6 fungal-type domain-containing protein n=2... [more]
A0A6H5K1B7_9PHAE7.790e-631.30Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
K8YU74_NANGC9.260e-549.02Tpa: zn 2cys6 transcription factor n=3 Tax=Monodop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 47..90
e-value: 0.0043
score: 26.1
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 51..86
e-value: 4.9E-5
score: 23.4
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 52..81
score: 9.644
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 50..131
e-value: 2.0E-8
score: 36.5
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 49..86
NoneNo IPR availablePANTHERPTHR47663FAMILY NOT NAMEDcoord: 49..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1748contigL-elsbetiae_contig1748:19778..22110 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1748.4911.1mRNA_L-elsbetiae_contig1748.4911.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1748 19480..23704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1748.4911.1 ID=prot_L-elsbetiae_contig1748.4911.1|Name=mRNA_L-elsbetiae_contig1748.4911.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=346bp
MATAMRGVGTKRPRGYVATAEEPPLPWAGRVPKPAMDADSFVDYGSGFLR
KSCDSCVSSKRRCDGHDPCTRCLRRKKPCHYTERKKCGPRSGQKTTNKMR
RLYTAETQLRRRFTTETQPQHQRPNGAHLHRTGVTGLAPVLGSSPPAHRT
PTLSAGDLSGDTTCVDHTDYSDNGLPSHRVLLRDESGSSWWSLEDQGAGA
GGGLPTRLNGDGGSWPQHEHHQLHRQGNSKVDDRGDGATGVGSAHFGFNE
LGHGGLWSGLHSSSTTGTGSGSGGSAGESWEEDDESEEGLGQAEEEVAAL
LVGLGKANEDFEGFSDDENDESGGSVSKPPTRQLSISTASQEWSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf