prot_L-elsbetiae_contig17424.4892.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17424.4892.1
Unique Nameprot_L-elsbetiae_contig17424.4892.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length239
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig17424.4892.1 vs. uniprot
Match: A0A6H5JW94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW94_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.050e-6
Identity = 26/42 (61.90%), Postives = 30/42 (71.43%), Query Frame = 0 
Query:    1 MVNVAKKGCAHPGCTKQPSYGKAGSK-PEYCSGHAKDGMVVV 41
            M NV  K C HPGCTK+PS+G AGSK  E+C  HAK  MV+V
Sbjct:    1 MFNVVDKRCGHPGCTKKPSFGTAGSKRAEFCCPHAKQDMVIV 42
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17424.4892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JW94_9PHAE1.050e-661.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17424contigL-elsbetiae_contig17424:1375..2091 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17424.4892.1mRNA_L-elsbetiae_contig17424.4892.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17424 1347..2732 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17424.4892.1 ID=prot_L-elsbetiae_contig17424.4892.1|Name=mRNA_L-elsbetiae_contig17424.4892.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp
MVNVAKKGCAHPGCTKQPSYGKAGSKPEYCSGHAKDGMVVVVSKRCMHPG
CTKWPSYGKAGSKAEYCSGHAKDGMVNVKNKRCTHPGCTKQPSCGKAGSK
PEYCSSHAKDGMANVKNKRCTHPGCTKQPSYGKAGSEPEYCSGHAKNGTV
NVKNKRCTHSGCTKVPSYGKAGSKPECCSGHAKGGMVNVKNKRCTHPGCT
KVPSYGKAGSKPEYCCGHAKDRMVDVVSKKCTHPGCTK*
back to top