prot_L-elsbetiae_contig17407.4883.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17407.4883.1
Unique Nameprot_L-elsbetiae_contig17407.4883.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length48
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig17407.4883.1 vs. uniprot
Match: A0A6H5L0F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0F3_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.100e-12
Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 0 
Query:    1 MATTLGLVGQQVWSAAFLLGDFVLTHEDLFAGMQV 35
            MATTLGLVGQQVWSA+FLLGDFVLTH++LFAGMQV
Sbjct:  108 MATTLGLVGQQVWSASFLLGDFVLTHDELFAGMQV 142
[Close]
BLAST of mRNA_L-elsbetiae_contig17407.4883.1 vs. uniprot
Match: D7FP93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP93_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 7.180e-12
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0 
Query:    1 MATTLGLVGQQVWSAAFLLGDFVLTHEDLFAGMQV 35
            MATTLGLVGQQVWSA+FLLGDFVLTH +LF GMQV
Sbjct:  100 MATTLGLVGQQVWSASFLLGDFVLTHNELFVGMQV 134
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17407.4883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0F3_9PHAE1.100e-1291.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP93_ECTSI7.180e-1288.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17407contigL-elsbetiae_contig17407:2968..3111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17407.4883.1mRNA_L-elsbetiae_contig17407.4883.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17407 2947..3372 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17407.4883.1 ID=prot_L-elsbetiae_contig17407.4883.1|Name=mRNA_L-elsbetiae_contig17407.4883.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=48bp
MATTLGLVGQQVWSAAFLLGDFVLTHEDLFAGMQVRCRYTSQCLQKT*
back to top