prot_L-elsbetiae_contig1739.4872.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1739.4872.1
Unique Nameprot_L-elsbetiae_contig1739.4872.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length313
Homology
BLAST of mRNA_L-elsbetiae_contig1739.4872.1 vs. uniprot
Match: A0A7S2MQ94_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQ94_9STRA)

HSP 1 Score: 165 bits (418), Expect = 2.900e-46
Identity = 88/217 (40.55%), Postives = 122/217 (56.22%), Query Frame = 0
Query:   71 DDGMFDPRR-DYWGNVGRMAGADSTATTPASSNWAAAAHRSLATTSSNCGPASSSDPCCIECFGLSFCDVLNGYKVEDKYYPGEATILGSCENFEDRASRLEVFGPSK---TFRDTAACREMVLDYTCLWWGSANEMYDNRCGIEAQV-YPCRSYCVQLARTCANNVVEWSELCRSIACPPTDEECVPGPYTTARDTFQDLDKACYLYEYHSALNSA 282
            DDG F+P    +WG+V +     +TA    +   +A A  +    +++CG   +  PCCI+C  L +C  +N Y +EDKYYP E  I GSC+  +DR  RLE+FGP+    TFRDT  CR +V+DY CLWW S N+ YDNRC     +  PCRSYCVQ+   CAN++ +W + C  I C   +  C  GP         D+D  C + EY S+ + A
Sbjct:    2 DDGHFNPASFQWWGSVNKTRRQLATAPGALTCESSACACETEGN-AADCGIDDNQCPCCIQCESLDYCSAINFYVMEDKYYPTENDITGSCDMLDDRIQRLEIFGPASLGYTFRDTDQCRSLVMDYICLWWASENDHYDNRCDYGEDIDRPCRSYCVQVGLVCANSL-DWLDTCYHIECASNEAGCTTGP--------DDIDYKCAIPEYISSFSGA 208          
BLAST of mRNA_L-elsbetiae_contig1739.4872.1 vs. uniprot
Match: A0A835Z6T3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6T3_9STRA)

HSP 1 Score: 157 bits (396), Expect = 4.190e-42
Identity = 93/245 (37.96%), Postives = 113/245 (46.12%), Query Frame = 0
Query:  118 CGPASSSDPCCIECFGLSFCDVLNGYKVEDKYYPGEATILGSCENFEDRASRLEVFGPSKT-----------------------------------------------FRDTAACREMVLDYTCLWWGSANEMYDNRCGIEAQVYPCRSYCVQLARTCANNVVEWSELCR--------------------------SIACPPTDEECVPGPYTTARDTFQDLDKACYLYEYHSALN---SATRGS 286
            CG A +  PCC+ C GL+ C VLN Y VE+KYYPG +  +GSC NF+DR SRL VFGP KT                                               FRDT  CR+ V  YTCLWWG+ N  +DNRCG  A   PCRS+CVQ+A  CAN+   W+                               IACPP  ++CVPGP+ T          AC+LYEY+S L    +A RGS
Sbjct:   52 CGVAPNPVPCCVLCLGLNQCSVLNSYAVEEKYYPGSSGTVGSCTNFDDRVSRLAVFGPEKTVWXXXXXXXXXXXXXXXSCDAAQVXXXXXXXXEKTVSXXXXXXXXXXFRDTPDCRKWVYAYTCLWWGTDNAHFDNRCGSFANRPPCRSFCVQVAEVCANDP-GWNAAAXXXXXXXAAAQVXXXXXXXXXXXXXXXGIACPPIADDCVPGPFVT----HPVEPDACFLYEYNSPLQGGAAAVRGS 291          
BLAST of mRNA_L-elsbetiae_contig1739.4872.1 vs. uniprot
Match: A0A8J2WWI3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWI3_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.780e-40
Identity = 90/231 (38.96%), Postives = 124/231 (53.68%), Query Frame = 0
Query:   69 FIDDGMFDPRRDYWGNVGRMAGADSTATTPASSNWAAAAHRSLATTSSNCGPASSSDPCCIECFG-LSFCDVLNGYKVEDKYYPGEATILGSCENFEDRASRLEVFGPSKTFRDTAACREMVLDYTCLWWGS--ANEMYDNRCGIEAQVY--PCRSYCVQLARTCANNVVEWSELCRSIACPPTDEECVPGPYTTARDTFQDLDKACYLYEYHSALNSATRGSYSPGVSAA 294
            ++DDGMFDPR     +  R    ++T       N   AA                 D CC  C   L  C  + GY VEDKYYP E ++ GSC++ + R + L+VFGPSKTFRD   CR +V +Y CLWWGS   ++  +N C  +  +   PCR +CVQ+A  CAN++ ++  LC++I CPP +E C+P P + A  T      ACY+Y Y S L +  +  Y PG S A
Sbjct:   83 WVDDGMFDPRE----HDPRFMVTNATRRRRLEENRCEAA-----------------DICCSLCKNDLQTCWRMAGYLVEDKYYPSEQSVTGSCDDIDRRVANLDVFGPSKTFRDNDLCRRLVNEYMCLWWGSEGVDQSSENHCSSKGVILVAPCRPFCVQVAIQCANSL-DYQRLCQAIPCPPIEETCMPEPRSVATVTLSKT-MACYVYRY-STLANMQQQDYIPGNSRA 289          
BLAST of mRNA_L-elsbetiae_contig1739.4872.1 vs. uniprot
Match: A0A7S2C5P0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5P0_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.920e-39
Identity = 77/174 (44.25%), Postives = 100/174 (57.47%), Query Frame = 0
Query:  117 NCGPASSSDPCCIECFG--LSFC-DVLNGYKVEDKYYPGEATILGSCENFEDRASRLEVFGPSKTFRDTAACREMVLDYTCLWWGSANEMYDNRCGIEAQVY-PCRSYCVQLARTCANNVVEWSELCRSIACPPTD-EECVPGPYTTARDTFQDLDKACYLYEY--HSALNSAT 283
            +CG +    PCCI C    +S+C D L G  +ED+YYP E  I GSC+N ++R   L+VFG  KTFRD   CR++V +Y CLWWGS N  Y+NRC    Q   PCR +CVQ+   CANN  +W  LC  I C   D  EC P PY+T+          C +YE+  H+  + AT
Sbjct:  121 DCGTSDEECPCCIRCLNEEMSYCHDALGGKLLEDQYYPTEKGISGSCDNLDERVGALDVFGKGKTFRDNDECRDLVREYVCLWWGSENAHYENRCNNGGQAAKPCRGFCVQVGLVCANNE-DWMNLCYDIPCSAGDGPECTPAPYSTSF--------LCSVYEFEGHAYSSKAT 285          
BLAST of mRNA_L-elsbetiae_contig1739.4872.1 vs. uniprot
Match: A0A7S2FUR6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FUR6_9STRA)

HSP 1 Score: 102 bits (253), Expect = 5.970e-23
Identity = 53/118 (44.92%), Postives = 67/118 (56.78%), Query Frame = 0
Query:  170 LEVFGPSKTFRDTAACREMVLDYTCLWWGSANEMYDNRCGIEAQVY-PCRSYCVQLARTCANNVVEWSELCRSIACPPTD-EECVPGPYTTARDTFQDLDKACYLYEY--HSALNSAT 283
            L+VFG  KTFRD   CR++V +Y CLWWGS N  Y+NRC    Q   PCR +CVQ+   CANN  +W  LC  I C   D  EC P PY+T+          C +YE+  H+  + AT
Sbjct:    8 LDVFGKGKTFRDNDECRDLVREYVCLWWGSENAHYENRCNNGGQAAKPCRGFCVQVGLVCANNE-DWMNLCYDIPCSAGDGPECTPAPYSTSF--------LCSVYEFEGHAYSSKAT 116          
BLAST of mRNA_L-elsbetiae_contig1739.4872.1 vs. uniprot
Match: A0A482SB23_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SB23_9ARCH)

HSP 1 Score: 65.9 bits (159), Expect = 1.390e-9
Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = 0
Query:  128 CIECFGLSFCDVLNGYKVEDKYYPGEATILGSCENFEDRASRLE--VFGPSKTFRDTAACR 186
            C+ C GLS C  LNGY V++KYYP       +C+  +   SR+E  +FG S+TFRDTA CR
Sbjct:   69 CVICRGLSVCTALNGYLVQEKYYPKNLNFRETCKVIDTFGSRIEKSIFGGSRTFRDTAQCR 129          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1739.4872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A7S2MQ94_9STRA2.900e-4640.55Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835Z6T3_9STRA4.190e-4237.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2WWI3_9STRA2.780e-4038.96Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2C5P0_9STRA2.920e-3944.25Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2FUR6_9STRA5.970e-2344.92Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A482SB23_9ARCH1.390e-949.18Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..286
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 287..309
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 310..312
NoneNo IPR availableTMHMMTMhelixcoord: 287..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1739contigL-elsbetiae_contig1739:10910..13972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1739.4872.1mRNA_L-elsbetiae_contig1739.4872.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1739 10910..13972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1739.4872.1 ID=prot_L-elsbetiae_contig1739.4872.1|Name=mRNA_L-elsbetiae_contig1739.4872.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=313bp
SAAKRVLRSSVVLLVFSDSDQQGLKQLHSREKPRSGTSQTRPHFIQAAEG
ASGVQSDTAQAAVARRGSFIDDGMFDPRRDYWGNVGRMAGADSTATTPAS
SNWAAAAHRSLATTSSNCGPASSSDPCCIECFGLSFCDVLNGYKVEDKYY
PGEATILGSCENFEDRASRLEVFGPSKTFRDTAACREMVLDYTCLWWGSA
NEMYDNRCGIEAQVYPCRSYCVQLARTCANNVVEWSELCRSIACPPTDEE
CVPGPYTTARDTFQDLDKACYLYEYHSALNSATRGSYSPGVSAAVTVSAV
VVAVVVFGATTT*
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