prot_L-elsbetiae_contig1729.4827.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1729.4827.1
Unique Nameprot_L-elsbetiae_contig1729.4827.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length473
Homology
BLAST of mRNA_L-elsbetiae_contig1729.4827.1 vs. uniprot
Match: D7G7H0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7H0_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 4.230e-41
Identity = 184/509 (36.15%), Postives = 243/509 (47.74%), Query Frame = 0
Query:    1 MYLASMGQLKHKRTRNTIAAEPTPRSSCASSAGPAXXXXXXXXXXXXXXXRNTRNNGANHGSDPVSQGATK----FECVGRSALAKANNSEANPVEPVEPG-HDKRSPKIVGDSS---LPLFSAAHRKEAGSDRDDRSASAPLFTRRPRARAASSTRGKLENRRPRSAGPSAGAVAAAAAT--LDPESPEARALAAETRFMPVGAIHRAFKGRRLAAVQAWDPQAAAAVRAARAEKLLRRTRIAGKTRT-TGAPMLAAASSAKRPLQGXXXXXXXXXXXXXDSRNEHKALLCPDERGG----------RRRIGPSSARRRSDQAHGNRSGEVVDWCGRNALIKDFFPSPPKLLDVAIRFCCLRERARQELGVVSAIEEAADGGSATGSEQGDSEEPDEPKRAPCSCRPG-------TATGSSG------TLSTARASTAAGYSSRGSGSTSGRATCSASSSDGIAAEE----RRARLLAELKALRRRMEDAEGLLREVDSSLLRPKPKK 471
            M+LASMG+LKHKRTRNTIAAE TPRSSC+S A P                  T N+  N  ++ V +G +      E  G +A+ +A++   +      PG     S K VGD      P +S        + R+D+ A +      PR    S+    L   +    GP+ G + A AA+     + P    +AAETR MPVGA+HRAFKGRRLAAVQAWDP AAAAVRA RAEK+LRR  + G+TR  +G  M AAA + +RP +               +  EHK      +RGG           RR+G  + R          S    DWCG   L +D    P +           R    + +    A  + A GG+  G+    + + D  +   C  R         +A+GSS       T  TAR STA   SSR   S  G + C++     ++ +E    RRARLLAEL+ LRRRM DAEGLLREVD S  RPK ++
Sbjct:    1 MFLASMGRLKHKRTRNTIAAEETPRSSCSSEADPTAALVADPGIPKTTEKHQT-NSVKNIENEAVVKGVSAPVQYAETRGAAAVGRASDWPGD-----NPGVKHMNSGKAVGDRKGFRTPAWSPPRPLSPTAKRNDQDADS-----HPRNHGISNGGDDLLPAK----GPTEGNLGARAASSATSAKFPTGEDVAAETRLMPVGALHRAFKGRRLAAVQAWDPLAAAAVRAERAEKMLRRA-LLGRTRANSGETMPAAAPARRRPRKAPGTKAAAT------TTTEHKVGGIGSDRGGGVGGARKCSSARRVGGPAERAVGRGGSLGDSKSDADWCGSRGLRRDARREPSRTELARTVAAVERIGGSRIVHGAGAPSKPAVGGTPAGANDLSTRKRDAVEGGSCPSRGSIKTSKSRSASGSSRETNPMHTWGTARTSTATSRSSRCPSSRRGSSACNSGRGTSVSGDEPVEMRRARLLAELEVLRRRMHDAEGLLREVDRS--RPKQRR 485          
BLAST of mRNA_L-elsbetiae_contig1729.4827.1 vs. uniprot
Match: A0A6H5KIE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIE2_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.810e-15
Identity = 60/101 (59.41%), Postives = 72/101 (71.29%), Query Frame = 0
Query:  154 NRRPRSAGPSAGAVAAAAATLDPESPEARALAAETRFMPVGAIHRAFKGRRLAAVQAWDPQAAAAVRAARAEKLLRRTRIAGKTRTTGAPMLAAASSAKRP 254
            ++RP+SA  +A +V AAA     +   A  +AAETR MPVG IHRAFKGRRLAAVQAWDP AAAAVRA RAEK+LRR  + G+T T    M AAA + +RP
Sbjct:  362 DQRPKSANAAAASVNAAAGA---KFSSAEDVAAETRLMPVGVIHRAFKGRRLAAVQAWDPLAAAAVRAERAEKMLRRAFL-GRTGTNSREMPAAAPARRRP 458          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1729.4827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7H0_ECTSI4.230e-4136.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIE2_9PHAE1.810e-1559.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 429..463

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1729contigL-elsbetiae_contig1729:20519..23888 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1729.4827.1mRNA_L-elsbetiae_contig1729.4827.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1729 20519..23888 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1729.4827.1 ID=prot_L-elsbetiae_contig1729.4827.1|Name=mRNA_L-elsbetiae_contig1729.4827.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=473bp
MYLASMGQLKHKRTRNTIAAEPTPRSSCASSAGPATAAAAAAASGPSAAR
RNTRNNGANHGSDPVSQGATKFECVGRSALAKANNSEANPVEPVEPGHDK
RSPKIVGDSSLPLFSAAHRKEAGSDRDDRSASAPLFTRRPRARAASSTRG
KLENRRPRSAGPSAGAVAAAAATLDPESPEARALAAETRFMPVGAIHRAF
KGRRLAAVQAWDPQAAAAVRAARAEKLLRRTRIAGKTRTTGAPMLAAASS
AKRPLQGAAAAAAAAAAAVLDSRNEHKALLCPDERGGRRRIGPSSARRRS
DQAHGNRSGEVVDWCGRNALIKDFFPSPPKLLDVAIRFCCLRERARQELG
VVSAIEEAADGGSATGSEQGDSEEPDEPKRAPCSCRPGTATGSSGTLSTA
RASTAAGYSSRGSGSTSGRATCSASSSDGIAAEERRARLLAELKALRRRM
EDAEGLLREVDSSLLRPKPKKR*
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