prot_L-elsbetiae_contig17243.4808.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17243.4808.1
Unique Nameprot_L-elsbetiae_contig17243.4808.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length176
Homology
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5L5Q2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Q2_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 2.630e-48
Identity = 77/126 (61.11%), Postives = 99/126 (78.57%), Query Frame = 0
Query:   50 CAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 175
            C  +FS+TQ+SV  +++EAEY A+A G+KE  IF+RY+WSF  PD +VGCT + EDN  A++LA NPA TPNSKH+D+RHHF R+RVDRGEFK+V+VP+  QHADFLTKPL + A  + R F MNL
Sbjct:  221 CVSFFSRTQKSVTLSSTEAEYAAMADGMKEA-IFLRYLWSFIFPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMNL 345          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 5.170e-45
Identity = 77/126 (61.11%), Postives = 99/126 (78.57%), Query Frame = 0
Query:   50 CAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 175
            C  +FS+TQ+SV  +++EAEY A+A G+KE  IF+RY+WSF  PD +VGCT + EDN  A++LA NPA TPNSKH+D+RHHF R+RVDRGEFK+V+VP+  QHADFLTKPL + A  + R F MNL
Sbjct:  989 CVSFFSRTQKSVTLSSTEAEYAAMADGMKEA-IFLRYLWSFISPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMNL 1113          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KZC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZC8_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 6.650e-45
Identity = 75/146 (51.37%), Postives = 99/146 (67.81%), Query Frame = 0
Query:   30 ARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 175
            A +    + + G+  +    C  Y  +TQ+SV  +++EAEY A++ G+KE  IF+RY+W F  P R+VGCT V+EDN  AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV +  Q ADFLTKPL +      R F MN+
Sbjct:   32 ANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 176          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5L610_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L610_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 8.660e-43
Identity = 71/126 (56.35%), Postives = 90/126 (71.43%), Query Frame = 0
Query:   50 CAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 175
            C  Y  +TQ+SV  +++EAEY A++ G+KE  IF+RY+W    P  +VGCT V+EDN  AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV +  Q ADFLTKPL +      R F MN+
Sbjct:    6 CVIYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRYLWKIIFPGCDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 130          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KG18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG18_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 2.890e-41
Identity = 74/119 (62.18%), Postives = 92/119 (77.31%), Query Frame = 0
Query:   58 QQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHL-DIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 175
            ++SV  +++EAEY A+A G+KE  IF+RY+WSF  PD +V CT V EDN  A++LA NPA TPNSKH+ DIRHHF R+RVDRGEFK+V VP+  QHADFLTKPLH+ A  + R F MNL
Sbjct:  297 EKSVMLSSTEAEYAAMADGMKEA-IFLRYLWSFIFPDGDVVCTVVKEDNVGALHLANNPATTPNSKHIIDIRHHFIRERVDRGEFKVVFVPSHLQHADFLTKPLHKEAFSVHRNFVMNL 414          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 3.290e-41
Identity = 75/146 (51.37%), Postives = 99/146 (67.81%), Query Frame = 0
Query:   30 ARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 175
            A +    + + G+  +    C  Y  +TQ+SV  +++EAEY A++ G+KE  IF+RY+W F  P R+VGCT V+EDN  AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV +  Q ADFLTKPL +      R F MN+
Sbjct:  431 ANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 575          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KHN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN8_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 8.130e-41
Identity = 72/126 (57.14%), Postives = 91/126 (72.22%), Query Frame = 0
Query:   50 CAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 175
            C  Y  +TQ+SV  +++EAEY A++ G+KE  IF+RY+W    P R+VGCT V+EDN  AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV +  Q ADFLTKPL +      R F MN+
Sbjct:  290 CVMYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRYLWKLIYPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 414          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KGK7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK7_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 1.490e-40
Identity = 75/146 (51.37%), Postives = 99/146 (67.81%), Query Frame = 0
Query:   30 ARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 175
            A +    + + G+  +    C  Y  +TQ+SV  +++EAEY A++ G+KE  IF+RY+W F  P R+VGCT V+EDN  AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV +  Q ADFLTKPL +      R F MN+
Sbjct:  655 ANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 799          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 2.020e-40
Identity = 75/146 (51.37%), Postives = 99/146 (67.81%), Query Frame = 0
Query:   30 ARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLRRQFAMNL 175
            A +    + + G+  +    C  Y  +TQ+SV  +++EAEY A++ G+KE  IF+RY+W F  P R+VGCT V+EDN  AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHV +  Q ADFLTKPL +      R F MN+
Sbjct: 1731 ANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEA-IFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 1875          
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Match: A0A6H5KPR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPR3_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 3.080e-40
Identity = 72/139 (51.80%), Postives = 93/139 (66.91%), Query Frame = 0
Query:   30 ARRRAGSQCLGGSQCVRVHVCAGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCTTVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKWQHADFLTKPLHQGALFLR 168
            A +    + + G+  +    C  Y  + Q+SV  +++EAEY A+  G+KE  IF+RY+W F  P R+VGCT V+EDN  AI+LA NPA TPNSKH+DIRHHF R+RV RGEFK+VHVP+  Q ADFLTK       FLR
Sbjct:   97 ANKATDRRSVSGALVMIAGACVMYLCRMQKSVTLSSTEAEYMAMFDGMKEA-IFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVPSDLQRADFLTKQTAPQGDFLR 234          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17243.4808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5Q2_9PHAE2.630e-4861.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCD8_9PHAE5.170e-4561.11Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KZC8_9PHAE6.650e-4551.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L610_9PHAE8.660e-4356.35Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KG18_9PHAE2.890e-4162.18Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWG1_9PHAE3.290e-4151.37Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KHN8_9PHAE8.130e-4157.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGK7_9PHAE1.490e-4051.37Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAC2_9PHAE2.020e-4051.37Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5KPR3_9PHAE3.080e-4051.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17243contigL-elsbetiae_contig17243:2337..2864 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17243.4808.1mRNA_L-elsbetiae_contig17243.4808.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17243 1059..3475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17243.4808.1 ID=prot_L-elsbetiae_contig17243.4808.1|Name=mRNA_L-elsbetiae_contig17243.4808.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=176bp
MFGGRSISGLHFSGEGTLTWCCMWTRTLLARRRAGSQCLGGSQCVRVHVC
AGYFSKTQQSVATATSEAEYGAIAQGVKEEMIFMRYVWSFALPDREVGCT
TVYEDNEEAIYLAINPALTPNSKHLDIRHHFFRKRVDRGEFKIVHVPTKW
QHADFLTKPLHQGALFLRRQFAMNL*
back to top