prot_L-elsbetiae_contig1723.4800.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1723.4800.1
Unique Nameprot_L-elsbetiae_contig1723.4800.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length789
Homology
BLAST of mRNA_L-elsbetiae_contig1723.4800.1 vs. uniprot
Match: D8LEM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM9_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 6.680e-71
Identity = 135/230 (58.70%), Postives = 158/230 (68.70%), Query Frame = 0
Query:  568 RLRLGSYGGPSPAPATAARDAEAVAGPDGGPGG------SGAGKKREVDWNELKRNLNLLLKEEGEFTPRDLNHAFQTRFGKSPFLDGTPLRYAVSAGWLRGVCFDVSSNTYNLAVRVPAHRREDPPEGAAPFPPARPR---AVPRREPAAPVTPSTMSPDGVDWQQLSSEFQQLLLPGALEAKEIHASYHATFRKPLIIGAGYSMRQAVIDGRLRGIALERGSRRLMCA 788
            +LR G+   PS A   A+         D G GG      + A +KR VDW ELK NLN LLKEEGE T RDLNHAFQ RFGKSPFLDGTPLRYAVSAGWL+GVC+D+++  +NL VRVPA RREDPP+GA  FPP   +     PRR+      P ++SPD  DW +LS+EF+QLLL GALE KE+H  YH  FRKPLI+G GY+MRQAV  G L GI  + GSRRLMCA
Sbjct:   93 QLRFGTSAAPSQAAGRAS---------DAGVGGVTSRPHALAPQKRGVDWRELKGNLNFLLKEEGELTGRDLNHAFQQRFGKSPFLDGTPLRYAVSAGWLKGVCYDLTNKCFNLTVRVPAGRREDPPDGAPTFPPTGSQLRAGAPRRD-----VPRSLSPDDFDWGRLSTEFRQLLLQGALEPKEVHVKYHREFRKPLILGEGYNMRQAVTAGLLIGITFDPGSRRLMCA 308          
BLAST of mRNA_L-elsbetiae_contig1723.4800.1 vs. uniprot
Match: A0A6H5KX85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX85_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 4.250e-61
Identity = 282/648 (43.52%), Postives = 331/648 (51.08%), Query Frame = 0
Query:   16 DVAPMTAAATPQEFLVKDLKSKLQATNVRERELHKHLLHHMQEKELLVNQVAELQRVCEALLLSQMQGDDSGTAAQAATAXXXXXLSSADVVAPDTLNTDATASDAAYNNGGAAAADAHSAAGVDPRAPKETAESERASLKLAAGGXXGETTPCADAGQPATQQHRSTSSSSLPVPDTGASALGPKPGAVLARPKDYGAVAVPPAATAAAVGVALKSPSSIALKSILGVAGGSTSVPGSK-------GTAGALNTTGPAAAAXXAAVHARAAGTDPTVDIPQLLVERGGRIRITALWEAYQNRFGETRYSLKDLFSMVKAGAIPFVVHEPPAGIRLLPSAPIYQQRQQQHLEQXXXXXXXXXXXXLXXXXXXXLLQXXXXXXXXXXXXXXXXQRRVAAELAALSQSYLAQGGSGAASPSVGPASSGVGDDADNMGHNRQQXXXXXXXXXXHSFSLPSPLMSALARLPGAQPSRESATTAGGIGSASDDSISFGWTSGEPSSASSPLGWQRPGSTAA------AAAAAAGNDKLGAESYDNDAADAXXXXXXXXXXXXXXGTADRGRLRLGSYGGPSPAPATAARDAEAVAGPDGGPGG------SGAGKKREVDWNELKRNLNLLLKEEGEFTPRDLNHAFQTRFGKS 644
            DVA   AA + ++F+V+DLK KL+A  VRERELH+HLLHHM+EK+LLVN VAELQRVCEALLLSQMQG   G A      XXXXXLS          +T A  ++   NNG  A   A  AAG     P  T + +R            +  P AD  + A QQ   TSSS   +  T ASA      AV A P   G +    AA+A A       P S  LK+I+ V G   S   S              +++ P       A H R AG+ P +DIPQLL+ERGGRIRITALWEAYQ RFGETRY+LKDLF+MVKAG IPFVVHEPPAGIRLLPSAP+YQQRQ   L QXXXXXXXXXXXX XXXXXXX   XXXXXXXXXXXXXX      AA  AA  Q+Y  Q      + S  PA S  G+   ++G                S +   P       L   Q      TT G +                            PG+TA+      AA  A  +D    E  ++D+                       +LR G    PS A   A+         D G GG      + A +KR VDW ELK N+NLLLKEEGE T RDLNHAFQ RFGK+
Sbjct:    8 DVAATAAAPSARDFVVEDLKDKLRAAAVRERELHQHLLHHMEEKDLLVNHVAELQRVCEALLLSQMQGT-GGPAXXXXXXXXXXXLS----------HTAALNANEKRNNG--AKVIASDAAGDIAAEP--TKQPDR------------QVWPGADMSRHAAQQQCLTSSSLKAITGTVASAPA---AAVAAYP---GRLLEQDAASATAT-AGNNPPPSGTLKAIVDVRGAGRSNASSVVEIHDGGRKEEERSSSAPVPLNSAVARHMRPAGSGPAIDIPQLLLERGGRIRITALWEAYQARFGETRYTLKDLFAMVKAGEIPFVVHEPPAGIRLLPSAPVYQQRQ---LRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------AAAQAAFIQAYRTQ-----EAASASPAMSATGNTGADIGTTGVAPPHQQRQQPQQSQAFVQPPAIGYPSLETDQHMSLDDTTTGCV----------------------------PGTTASDDNKDDAAETAGDSDGWAEEKQEDDS---------------------EHQLRFGISAAPSQAAGRAS---------DAGVGGVTSRPHAVAPQKRGVDWKELKGNVNLLLKEEGELTGRDLNHAFQQRFGKA 549          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1723.4800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEM9_ECTSI6.680e-7158.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KX85_9PHAE4.250e-6143.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 356..396

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1723contigL-elsbetiae_contig1723:8647..15605 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1723.4800.1mRNA_L-elsbetiae_contig1723.4800.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1723 8381..15639 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1723.4800.1 ID=prot_L-elsbetiae_contig1723.4800.1|Name=mRNA_L-elsbetiae_contig1723.4800.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=789bp
MHEVPRPGPATTSSQDVAPMTAAATPQEFLVKDLKSKLQATNVRERELHK
HLLHHMQEKELLVNQVAELQRVCEALLLSQMQGDDSGTAAQAATAAATAA
LSSADVVAPDTLNTDATASDAAYNNGGAAAADAHSAAGVDPRAPKETAES
ERASLKLAAGGGGGETTPCADAGQPATQQHRSTSSSSLPVPDTGASALGP
KPGAVLARPKDYGAVAVPPAATAAAVGVALKSPSSIALKSILGVAGGSTS
VPGSKGTAGALNTTGPAAAAAAAAVHARAAGTDPTVDIPQLLVERGGRIR
ITALWEAYQNRFGETRYSLKDLFSMVKAGAIPFVVHEPPAGIRLLPSAPI
YQQRQQQHLEQQLRRQQHQQQQLLQRQQQQQLLQHQQQQLLQHQQQQQLQ
QRRVAAELAALSQSYLAQGGSGAASPSVGPASSGVGDDADNMGHNRQQQQ
QQQQQQQQHSFSLPSPLMSALARLPGAQPSRESATTAGGIGSASDDSISF
GWTSGEPSSASSPLGWQRPGSTAAAAAAAAGNDKLGAESYDNDAADAGGA
SGNSGRGGGEGGTADRGRLRLGSYGGPSPAPATAARDAEAVAGPDGGPGG
SGAGKKREVDWNELKRNLNLLLKEEGEFTPRDLNHAFQTRFGKSPFLDGT
PLRYAVSAGWLRGVCFDVSSNTYNLAVRVPAHRREDPPEGAAPFPPARPR
AVPRREPAAPVTPSTMSPDGVDWQQLSSEFQQLLLPGALEAKEIHASYHA
TFRKPLIIGAGYSMRQAVIDGRLRGIALERGSRRLMCA*
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