prot_L-elsbetiae_contig1720.4786.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1720.4786.1
Unique Nameprot_L-elsbetiae_contig1720.4786.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length438
Homology
BLAST of mRNA_L-elsbetiae_contig1720.4786.1 vs. uniprot
Match: A0A6H5KG62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG62_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 7.850e-22
Identity = 153/433 (35.33%), Postives = 188/433 (43.42%), Query Frame = 0
Query:   85 VATANPRLQ-VSALPRGTVVRVRLFAKEETVPLVVPEVGQEEKITAANSAGKGETEQQQDEGDREVVTEXXXXXXXXXXXXXXXXXXXXXXXC---AQDVV-----------------------------ASSSVAVLPEPATGEQKVEASVPSLL--PEAEQVKDRPQQ--------HYQQQRGGE----TAAPVSEENAAAGVGAAKLVVQVYPAVAKEEHVLQTEETTPPELQTATFRVVDEHHAGA------------RMGEAPCSSALVERETIVTTVLPSXXXXXXXXXXXXXLLSQQPAEEIAVMKKMHDDVKETVAAEHGVAVGDEHRE--------------------GKGLAVVVPQHAGSVVDAETRSLVEESKYLQFADDERGVLCTLTGKKIAPAYDNILLYMGSKKVQQLMVEGPFFMT 438
            V  ANPRLQ VSALPR TVV+ +LF +EE      PE   EE  TAA    +G+     D     VVT  XXXXXXXXXXXXXXXXXX          DVV                             AS+++AV  EPA  E++ + +  S L   E  Q + RP+         H +QQ+  E    TA P  + +     G A+ V QV    A  E                                        R  + P  S L++ E  V  +LP                 Q+   E +VM    +D  +T     G AV  E+                      G+  AV VP HAG VVD ETRSLVE SKYL+F DDER VLCTLTGKK+AP Y  IL YMGS++VQQL+VEGP  M+
Sbjct:  138 VVAANPRLQGVSALPRETVVQAKLFVEEEDDESCAPET-MEEGTTAAVDVTEGD-----DLAGTSVVTPAXXXXXXXXXXXXXXXXXXENMAADGQPADVVDLPSAGMKQDESVVTIMTIPEKENHVTLGASAAIAVSTEPAHMEEEGDENPASCLRSEEERQGETRPEGAVVASDEGHDEQQQVNEAGACTADPAKQRS-----GDAQEVPQVVMQPASGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNRTNDEPMPSVLLQNERDVVPLLPP----------------QEEDPEASVMPSQPEDDADTAPVPQGCAVVTENAPRVVGEPGSSRKLEAAADVGLGEERAVAVPGHAGLVVDEETRSLVEGSKYLRFEDDERTVLCTLTGKKLAPDYIGILNYMGSRRVQQLVVEGPVSMS 543          
BLAST of mRNA_L-elsbetiae_contig1720.4786.1 vs. uniprot
Match: D7G929_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G929_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 3.400e-21
Identity = 53/76 (69.74%), Postives = 60/76 (78.95%), Query Frame = 0
Query:  363 GKGLAVVVPQHAGSVVDAETRSLVEESKYLQFADDERGVLCTLTGKKIAPAYDNILLYMGSKKVQQLMVEGPFFMT 438
            G+   V VP HAG VVD ETRSLVE SKYL+F DDER VLCTLTGKK+AP Y  IL YMGS++VQQL+VEGP  M+
Sbjct:  231 GEERTVAVPGHAGLVVDEETRSLVEGSKYLRFEDDERTVLCTLTGKKLAPDYIGILKYMGSRRVQQLVVEGPVSMS 306          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1720.4786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG62_9PHAE7.850e-2235.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G929_ECTSI3.400e-2169.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1720contigL-elsbetiae_contig1720:1815..3128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1720.4786.1mRNA_L-elsbetiae_contig1720.4786.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1720 1815..3128 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1720.4786.1 ID=prot_L-elsbetiae_contig1720.4786.1|Name=mRNA_L-elsbetiae_contig1720.4786.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=438bp
IQLSTAATGDDPTRETVTIDAAMRTSDNKVGVEKTLTVVEETKTDVRDES
ASAAAPVSAAEAGQEGEAPVSVTTDVLQGRPSMMVATANPRLQVSALPRG
TVVRVRLFAKEETVPLVVPEVGQEEKITAANSAGKGETEQQQDEGDREVV
TEERNENVEPPHQQQEENTTAVVTVCAQDVVASSSVAVLPEPATGEQKVE
ASVPSLLPEAEQVKDRPQQHYQQQRGGETAAPVSEENAAAGVGAAKLVVQ
VYPAVAKEEHVLQTEETTPPELQTATFRVVDEHHAGARMGEAPCSSALVE
RETIVTTVLPSQEKEEENDDQAPVLLSQQPAEEIAVMKKMHDDVKETVAA
EHGVAVGDEHREGKGLAVVVPQHAGSVVDAETRSLVEESKYLQFADDERG
VLCTLTGKKIAPAYDNILLYMGSKKVQQLMVEGPFFMT
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