prot_L-elsbetiae_contig1716.4772.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1716.4772.1
Unique Nameprot_L-elsbetiae_contig1716.4772.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1407
Homology
BLAST of mRNA_L-elsbetiae_contig1716.4772.1 vs. uniprot
Match: A0A6H5J8K7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8K7_9PHAE)

HSP 1 Score: 498 bits (1282), Expect = 1.410e-147
Identity = 626/1608 (38.93%), Postives = 729/1608 (45.34%), Query Frame = 0
Query:   30 MNGDRAGIYKGVGSPSPPPPSFPNGGPAPLRPGDSRQPA------PPAQGEDPSFDAKVAAEFFRLKDAKTSLRESALSDLTRGGEGGRGGTRGAPPPGAFESDVERAMRELEVEVGLPKSATSRLQFSSPSSQPXXXX------------------------------AVSKRPDLSDRRAGADEGSSSSLLSQMDMRRVSPGGGKGRPGGLRDMWDNSSGSEGRSF------------LFG---------PEQXXXXXXXXXXXXXXXXXXXQTQRHGPGLKGMWGGGEQRE----ESLRPXXXXXXXXXXXXXPDMAAADAARSESQAAYFSALQRDAQERRTFSDDPQGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHGRQDGQQYPPYSVSGRNDGGSGHGTSLAGIGTPRGGVAITPRQQRREISEGADSGDNLYRAVDRAKKAAYADELRKQMSEKEARMAMDENTPASGRRLASTGGRGXXXXXXXXXXXXGDGYYRAPSTPVSHGRDFFPGQSVPD-NGGSPLTDTGRTNDRWPSAAWSTPPQGGSTSDASGSDVRA-GEGHVTAARRRLVEDVYGGGGMGAALGGAGYRRASTGSHXXXXXXXXXXXXSHSATRLGQVGG---GGRRESVTFEGAGEAASNGSPTYLRTGAGVQNLRESEHCENKLQKRAAALEQQRALEAQIAAKARA------------------------------KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPI--DGEADKNFRAPAFGGSMSALDDRGEAAAAAGY--PSDEGTGVGGGLRQSQQTQYQQRRAADLAPPSDRVG---LGGVGGAELETPRRRSNVPDVDDLPAGAQARAQVLRSSPPH---GNXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGR---------FRGGTGLEGTNAPAVEEARGGRKGTTAA------FEGGAGGAPSDPPLQTRSLLVPVSSPTLFPPFPADTAYTAASDAGPALPRESDRRPMMQRSFAPSGRPGGDLER-RPVAPAVGSTAVFSADPPQDEMDAFVTKWQDEHLRRRGSQGH-------------------------RHPQGGG-AVPDANERHPSSSPGGRTACRSPPRSLL--RGSRARGYSDGGRGRDSAAPLGGKTGKLGELEASLAATSRMVNPPSLPRPPSTPR----AGGADAGDRRQAQRPVDALGGGXXXXXXXXXXXXXXGAVNLSEQSLTSDSILFYLSGQQRESMAEAE---AAAAPGRFPATNGGAVLKSRNSGISTSRLGRTRESSEVGIDGERGYEWESEGGDGTGDLQGVGVLSPQLGGSVLRGEEDGDQ----------GQMSPLTRLLAETPVRLRA------------------PDDVRASREADP-------------------------------IAAAAAAPSFGPDPQAHRFAFGGKD-GGARTRRTRPAA-------PERDAGGS------VAGAARRARALWGAPSAGATAGGGGDV-------AIAEALTRRGM--PWEEMPASEGRVSS 1398
            M+GD+ G  +  GSP     S  N GP PL PG   QP       PP  G+ PSFDAKVA+EF RL++++ S R+S  +++T GG        GAP P AFESDV RAMR+LEV +                   XXXX                              AVS RP+ SD  +  DEG    +LSQMDM RV PGGGKG+PGGLR MW++  G E  +             L G         P +                   QT+R GPGLKGMWGG +        SLRP XXXXXXXXXXXX      D ARSE+QAAYF AL RD QE+R FS++P+ +                                           GR       PY VSG +     HGTSLAGIGTPRGGV  + +QQ   +  G  +G                                                  XXXXXXXXXXXX     R   TP S GR+  PG SV   + G PL       D WPS AWSTP                  +G ++AARRRLVEDVYGGGGMGAALGG GYRRASTG +              SAT    VGG   G  R +   EGA   A  G P+YLRTGAGVQ+LRESEH ++K Q+RAAALEQQRALEAQIAAKA A                              K                             XXXXXXXXXXXXXX     XXXXXXXX       RQ    DGE     RAPA GGS    +D      AAGY  PSD G   G G    +Q + Q R+A D A PS R G   +GG GG      + RSN+PDVDDLPAGA ARAQVLRSSPP+    +                            GGR         F  GTG  G +APA EE+   R+ TT A       + GA G+P    L+ RS+L+P+SSPTLFPPFP DT      DA       +D   + Q  FA  GR     +R  P A A G  A     PPQDEMDAFVT+WQ EHLRRR                              R   G    +P ++     SSPGGR  C SP R  L  R SRA G     RGR  AA  GG  G   ELE SLAATSRMVNPPSLPRPP+         G  +G R + QRP     G                A +LSEQSLTSDSILFYLSGQQ+ESMA +    A  A GR  A +    L++  SGI+T+RLG+  ESSEV  DG R Y WES      G      + SP+ G S      DG            GQMSPLTRLLAETPVRL+A                  P D R  R  D                                +  +A +P F  DPQA+R A GG +  G RT++    +       P R AGG+       AG  RRARALWG P +G TAG GG          +AEAL+RRG+  PWEE+  SE R +S
Sbjct:   54 MSGDQTGALESRGSPYSVG-SISNAGPPPLPPGGHHQPQGRLSAPPPRPGQHPSFDAKVASEFLRLRESRGSPRDSP-AEMTSGGR-----WAGAPAPEAFESDVARAMRDLEVRLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSARPEHSDDLSAGDEG----MLSQMDMHRVVPGGGKGKPGGLRGMWNDDGGVERDAAGERRRQPQRGGGLAGMQDEEQANAPPETGVATPFPLGDGRRHSSVQQTRRQGPGLKGMWGGDDPAAATPASSLRPQXXXXXXXXXXXXXXXXXXDMARSEAQAAYFDALTRDVQEKRAFSNNPEERQQQQQVRQS--------------------------------VFGRSS-----PYGVSGNSA--IEHGTSLAGIGTPRGGVNASLQQQL--LLRGGLNGRGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRTLFTPRSDGRENRPGHSVGGPSAGPPL------RDGWPSEAWSTPXXXXXXXXXXXXXXXXXSDGQLSAARRRLVEDVYGGGGMGAALGGTGYRRASTGDYGAGSGGARP----QSATGPSVVGGERLGDARAAGGVEGAAVTAGGG-PSYLRTGAGVQSLRESEHGDSKWQRRAAALEQQRALEAQIAAKASARXXXXXXXXXXXXXXARLSLRVSTFRKECNKMWGTGRVLNLLAGDGTDFMPMQVEAEADEXXXXXXXXXXXXXXGLYRQXXXXXXXXRVGSGGRRQSHKDDGEDAAFSRAPAHGGSTPVANDSSSVGVAAGYFPPSDGG---GRGDSDVRQGELQHRQAIDGAFPSGRRGGNAIGGSGGGRQA--QHRSNIPDVDDLPAGAHARAQVLRSSPPNRTPADTSTPSPSSWRPVSARSAVGGGLVSKERRGGRSPAAAAPDDFDEGTG-RGGDAPAAEESFPVRRRTTPAPALGDNRDDGARGSP----LRARSILLPLSSPTLFPPFPGDT------DADIVRGPPADSPGLAQECFA-GGRGAAHRDRVSPAAEAAG--AAGGVHPPQDEMDAFVTRWQVEHLRRRSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKADGNDYCLPSSSS---FSSPGGRAVCLSPSRGALPARSSRAVGVV---RGRGFAAVPGGDAG---ELEESLAATSRMVNPPSLPRPPTGAHDDGEGDGGRSGTRSRRQRPAGPPSG------------VEDDAADLSEQSLTSDSILFYLSGQQQESMAASPLMVAEEATGREYAKSA-RTLENLGSGIATNRLGK--ESSEV--DG-RDYPWESRS-SAAGAASPSTLTSPRTGASA---RADGXXXXXXXXXXXGGQMSPLTRLLAETPVRLQAASGVSXXXXXXXXXXXXAPGDFRVGRGVDSSGKKQHSLQPFFFAEPLNGLFGDVRGHPCLSVEFSARSP-FRSDPQAYRPATGGDNTNGGRTKQQEADSLCGEASWPSRAAGGNDGGGAGAAGVGRRARALWGRPVSGGTAGSGGCAERAEGVETVAEALSRRGIGRPWEELSLSEARAAS 1547          
BLAST of mRNA_L-elsbetiae_contig1716.4772.1 vs. uniprot
Match: D8LLY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY9_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 2.440e-107
Identity = 644/1590 (40.50%), Postives = 741/1590 (46.60%), Query Frame = 0
Query:   11 DVGGGASQVYDQTVPASGVMNGDRAGIYKGVGSPSPPPPSFPNGGPAPLRPGDSRQPA------PPAQGEDPSFDAKVAAEFFRLKDAKTSLRESALSDLTRGGEGGRGGTRGAPPPGAFESDVERAMRELEVEVGLPKSATSRLQFSSPSSQPXXXX-----------------------------AVSKRPDLSDRRAGADEGSSSSLLSQMDMRRVSPGGGKGRPGGLRDMWDNSSGSEGRSF------------LFG--------PEQXXXXXXXXXXXXXXXXXXXQTQRHGPGLKGMWGGGEQRE----ESLRPXXXXXXXXXXXXXPDMAAADAARSESQAAYFSALQRDAQERRTFSDDPQGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHGRQDGQQYPPYSVSGRNDGGSGHGTSLAGIGTPRGGVAITPRQQRREISEGADSGDNLYRAVDRAKKAAYADELRKQMSEKEARMAMDENTPASGRRLASTGGRGXXXXXXXXXXXXGDGYYRAPSTPVSHGRDFFPGQSVPD-NGGSPLTDTGRTNDRWPSAAWSTPP---------------------QGGSTSDASGSDVRAGEGHVTAARRRLVEDVYGGGGMGAALGGAGYRRASTGSHXXXXXXXXXXXXSHSATRLGQVGGG---GRRESVTFEGAGEAASNGSPTYLRTGAGVQNLRESEHCENKLQKRAAALEQQRALEAQIAAKARAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPI----DGEADKNFRAPAFGGSMSALDDRGEAAAAAG-YPSDEGTGVGGG-LRQSQQTQYQQRRAADLAPPSDRVG---LGGVGGAELETPRRRSNVPDVDDLPAGAQARAQVLRSSPPHGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGR---------------------FRGGTGLEGTNAPAVEEARGGRKGTTAA--FEGGAGGAPSDPPLQTRSLLVPVSSPTLFPPFPADTAYTAASDAGPALPRESDRRPMMQRSFAPSGRPGGDLERRPVAPAVGSTAVF--------SADPPQDEMDAFVTKW----QDEHLRRRGSQGHRHPQGGGAVPDANERHPSSS----PGGRTACRSPPRSLL--RGSRARGYSDGGRGRDSAAPLGGKTGKLGELEASLAATSRMVNPPSLPRPPSTPR----AGGADAGDRRQAQRPVDALGGGXXXXXXXXXXXXXXGAVNLSEQSLTSDSILFYLSGQQRESMAEAEAAAAPGRFPATNG-----GAVLKSRNSGISTSRLGRTRESSEVGIDGERGYEWESEGGDGTGDLQGVGVLSPQLGGSVLRGEEDGDQ--------GQMSPLTRLLAETPVRLRA------------PDDVRASREADPIAAAAAAPSFGPDPQAHRFAFGGKD-GGARTRRTRPAAPERDAGGSVAGAARRARALWGAPSAGATAGGGGDV------------------------------------AIAEALTRRG--MPWEEMPASEGRVSS 1398
            D+G G  Q   + +  SG    D+ G  +  GSP     SF N GP PL PG   QP       PP  G+ PSFDAKVA+EF RL++++ S R+S  +++T GG        GAP P AFESDV RAMR+LEV +                   XXXX                             AVS RP+ SD  +   EG    +LSQMDM RV   GGKG+PGGLR MW++  G E                L G        P +                   QT+R GPGLKGMWGG +        SLRP XXXXXXXXXXXX      D ARSE+QAAYF AL RD QE+R         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                         DN                                                                 RA  TP S GR+  P  SV   + GSPL       D WPS AWSTP                      +GG     SGSD     G ++AARRRLVEDVY    MGAALGG GYRRAST ++              SAT  G +GG      R +   EGA   A  G P++LRTGAGVQ+LRESEH ++KLQ+RAAALEQQRALEAQIAAKARA+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXX        DGE     RAP  GG+ S  +D      AAG +P   G G G G +RQ +    Q R+A D A PS R G   +GG GG   +   RRS +PDVDDLPAGA ARAQVLRSSPP+                        XXXXXX                        F  GTG  G + PA EE   GR+ TT A  F G         PL+ RS LVP+SSPTLFPPFP DT      DA       +D   + Q SFA  GR  G + R  V+PA                  PPQDEMDAFVT +    +   +R           GG  V   ++  PSSS    PGGR  C SP R  L  R SR  G   GGRG  SAA  GG  G   ELE SLAATSRMVNPPSLPRPP+         G  +G R + Q P     G                A +L+EQSLTSDSILFYLSGQQ+ESMA +    A     AT G     G  L+SR SGI+T+RLG+  ESS+V  DG R Y WE       G  +   + SP+ G S      DG          GQMSPLTRLLAETPVRL A            P D R  R    + ++A  P F  DPQA+R A GG +  G RT++      E D   S++G      A W + +AG                                              +AEAL+RRG  MPWEE+  SE R +S
Sbjct:   40 DLGSGTVQRRREDLGISG----DQTGALESRGSPYSAG-SFSNAGPPPLPPGGHHQPQGRLSAPPPRPGQRPSFDAKVASEFLRLRESRVSPRDSP-AEITSGGR-----WAGAPAPEAFESDVARAMRDLEVRLATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSARPEHSDDLSAGGEG----MLSQMDMHRVVSRGGKGKPGGLRGMWNDDGGVERDETGARRPKPQRGGDLVGMQDEQVNAPPETRGAMPFPLGDGRRHSSVQQTRRQGPGLKGMWGGDDPAAATPASSLRPQXXXXXXXXXXXXXXXXXXDIARSEAQAAYFDALTRDVQEKRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------XXXXXXXXXXXXXXXXXXXDN-----------------------------------------------------------------RALFTPRSDGRENRPVHSVGGPSAGSPL------RDGWPSDAWSTPXXXXXXXXXXXXXXXXXXXXXXRGG---PGSGSD-----GQLSAARRRLVEDVYXXXXMGAALGGTGYRRASTVNYGARSGGARP----QSATGPGVMGGELLVDARAAGGVEGAAVTAGGG-PSFLRTGAGVQSLRESEHGDSKLQRRAAALEQQRALEAQIAAKARARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGLYRQXXXXXXXXXXXXXXXXXXPKDDGEDAAYSRAPVHGGNTSVANDSSSVGVAAGHFPPSGGGGRGDGDIRQGE---LQHRQAIDGAFPSARGGGNAIGGSGGGR-QARHRRSIIPDVDDLPAGAYARAQVLRSSPPNRTPAGTSMPSPSSWRPVSARSAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDFDEGTGRRG-DVPAAEENFPGRRRTTPAPAFGGDRDDIARGSPLRARSTLVPLSSPTLFPPFPGDT------DADIVRGPPTDSPGLAQESFA-GGR--GAVHRDRVSPAAXXXXXXXXXXXXXXGVHPPQDEMDAFVTSFTFILEINQIR-----------GGRKVDGNDDCLPSSSSFSSPGGRAVCLSPSRGGLPARISRVNGVV-GGRG--SAAVPGGNAG---ELEESLAATSRMVNPPSLPRPPTGAHDDGEGDGGRSGTRSRRQCPAGPPSG------------VEDDATDLNEQSLTSDSILFYLSGQQQESMAASPPMLAE---EATGGEYAKSGRTLESRGSGIATNRLGK--ESSQV--DG-RDYPWEGRS-SAAGAARPSTLTSPRTGASA---RADGGXXXXXXXXGGQMSPLTRLLAETPVRLHAASGVSAASGVHAPGDFRVERG---VGSSARLP-FRSDPQAYRLATGGNNTDGGRTKQQ-----EAD---SLSG-----EASWLSRAAGXXXXXXXXXXXXXXXXRRTXXXXXXXXXXXXXXXXXXXXXXXXXETVAEALSRRGIGMPWEELSLSEARAAS 1426          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1716.4772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J8K7_9PHAE1.410e-14738.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLY9_ECTSI2.440e-10740.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 322..362
NoneNo IPR availableCOILSCoilCoilcoord: 644..735
NoneNo IPR availableCOILSCoilCoilcoord: 436..456
NoneNo IPR availablePANTHERPTHR22933:SF31coord: 319..721
NoneNo IPR availablePANTHERPTHR22933UNCHARACTERIZEDcoord: 319..721

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1716contigL-elsbetiae_contig1716:8264..14129 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1716.4772.1mRNA_L-elsbetiae_contig1716.4772.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1716 8170..14392 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1716.4772.1 ID=prot_L-elsbetiae_contig1716.4772.1|Name=mRNA_L-elsbetiae_contig1716.4772.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1407bp
MSSWERFKHGDVGGGASQVYDQTVPASGVMNGDRAGIYKGVGSPSPPPPS
FPNGGPAPLRPGDSRQPAPPAQGEDPSFDAKVAAEFFRLKDAKTSLRESA
LSDLTRGGEGGRGGTRGAPPPGAFESDVERAMRELEVEVGLPKSATSRLQ
FSSPSSQPPPPPAVSKRPDLSDRRAGADEGSSSSLLSQMDMRRVSPGGGK
GRPGGLRDMWDNSSGSEGRSFLFGPEQQQQQQHQQQHRWGGGSSSQQTQR
HGPGLKGMWGGGEQREESLRPQRQGPGLRGLWSGPDMAAADAARSESQAA
YFSALQRDAQERRTFSDDPQGQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQRQQQAHGRQDGQQYPPYSVSGRNDGGSGHGTSLAGIGTPRG
GVAITPRQQRREISEGADSGDNLYRAVDRAKKAAYADELRKQMSEKEARM
AMDENTPASGRRLASTGGRGGGGGSGGGGGGSGDGYYRAPSTPVSHGRDF
FPGQSVPDNGGSPLTDTGRTNDRWPSAAWSTPPQGGSTSDASGSDVRAGE
GHVTAARRRLVEDVYGGGGMGAALGGAGYRRASTGSHGVHGGGGGGSAGS
HSATRLGQVGGGGRRESVTFEGAGEAASNGSPTYLRTGAGVQNLRESEHC
ENKLQKRAAALEQQRALEAQIAAKARAKKEEEDERKREEEEEARQQQEQK
RRLEADAEEGRRRKQAEQQEQLEGLYRQQEEALRRKRGGGGRQPIDGEAD
KNFRAPAFGGSMSALDDRGEAAAAAGYPSDEGTGVGGGLRQSQQTQYQQR
RAADLAPPSDRVGLGGVGGAELETPRRRSNVPDVDDLPAGAQARAQVLRS
SPPHGNGGGGMSTPRASSASSTRRRNASPAASAAGGRFRGGTGLEGTNAP
AVEEARGGRKGTTAAFEGGAGGAPSDPPLQTRSLLVPVSSPTLFPPFPAD
TAYTAASDAGPALPRESDRRPMMQRSFAPSGRPGGDLERRPVAPAVGSTA
VFSADPPQDEMDAFVTKWQDEHLRRRGSQGHRHPQGGGAVPDANERHPSS
SPGGRTACRSPPRSLLRGSRARGYSDGGRGRDSAAPLGGKTGKLGELEAS
LAATSRMVNPPSLPRPPSTPRAGGADAGDRRQAQRPVDALGGGGAGGGGA
GGEGDGDGAVNLSEQSLTSDSILFYLSGQQRESMAEAEAAAAPGRFPATN
GGAVLKSRNSGISTSRLGRTRESSEVGIDGERGYEWESEGGDGTGDLQGV
GVLSPQLGGSVLRGEEDGDQGQMSPLTRLLAETPVRLRAPDDVRASREAD
PIAAAAAAPSFGPDPQAHRFAFGGKDGGARTRRTRPAAPERDAGGSVAGA
ARRARALWGAPSAGATAGGGGDVAIAEALTRRGMPWEEMPASEGRVSSSG
APPFAS*
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