prot_L-elsbetiae_contig17157.4770.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17157.4770.1
Unique Nameprot_L-elsbetiae_contig17157.4770.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length152
Homology
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BLAST of mRNA_L-elsbetiae_contig17157.4770.1 vs. uniprot
Match: A0A6H5JUK6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK6_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 2.140e-20
Identity = 121/152 (79.61%), Postives = 124/152 (81.58%), Query Frame = 0 
Query:    1 ISFDVTHIHYTPTCRKKKVRIWDWEYYKEERALTGHGWDVKTVEWHPYKSLIVSGSKDNLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPQHERLLASGGYDGKMMYWTVG 152
            +SF  T   +        VRIWDWEYYKEERALTGHGWDVKTVEWHPYK             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PQHERLLASGGYDGKMMYW +G
Sbjct:   18 LSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHPYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQHERLLASGGYDGKMMYWVIG 169
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BLAST of mRNA_L-elsbetiae_contig17157.4770.1 vs. uniprot
Match: A0A4S4L1Z3_9AGAM (Polyadenylation factor subunit 2 n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4L1Z3_9AGAM)

HSP 1 Score: 76.6 bits (187), Expect = 2.000e-13
Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 0 
Query:   19 VRIWDWEYYKEERALTGHGWDVKTVEWHPYKSLIVSGSKDNLIK 62
            VRIWD+E  +EER L+GHGWDV+ V+WHP K L+VSGSKDNL+K
Sbjct:  235 VRIWDFEESREERVLSGHGWDVRCVQWHPTKGLLVSGSKDNLVK 278
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BLAST of mRNA_L-elsbetiae_contig17157.4770.1 vs. uniprot
Match: UPI0020082375 (WD40 repeat-like protein n=1 Tax=Epithele typhae TaxID=378194 RepID=UPI0020082375)

HSP 1 Score: 76.3 bits (186), Expect = 2.690e-13
Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 0 
Query:    1 ISFDVTHIHYTPTCRKKKVRIWDWEYYKEERALTGHGWDVKTVEWHPYKSLIVSGSKDNLIK 62
            +SF      +        +R+W +E  + ER LTGHGWDVK VEWHP K L+VSGSKDN+IK
Sbjct:  173 LSFSPDDTRFATASDDSTIRLWSFEEQRAERTLTGHGWDVKCVEWHPSKGLLVSGSKDNMIK 234
[Close]
BLAST of mRNA_L-elsbetiae_contig17157.4770.1 vs. uniprot
Match: A0A152A6F6_9MYCE (WD40 repeat-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A6F6_9MYCE)

HSP 1 Score: 75.9 bits (185), Expect = 3.410e-13
Identity = 112/155 (72.26%), Postives = 124/155 (80.00%), Query Frame = 0 
Query:    1 ISFDVTHIHY---TPTCRKKKVRIWDWEYYKEERALTGHGWDVKTVEWHPYKSLIVSGSKDNLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPQHERLLASGGYDGKMMYWTVG 152
            ISF  T + +   + T     ++IWD+  YKEE +L GHGWDVK V WHP K+L+VSGSK     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHP HE L  SGG+DG ++YW VG
Sbjct:  218 ISFSPTDLKFASCSDTSTDASLKIWDFARYKEETSLKGHGWDVKCVAWHPQKALLVSGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPFHEELFVSGGFDGSILYWVVG 372
[Close]
BLAST of mRNA_L-elsbetiae_contig17157.4770.1 vs. uniprot
Match: A0A8H8SNN8_9AGAM (Polyadenylation factor subunit 2 n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8SNN8_9AGAM)

HSP 1 Score: 75.1 bits (183), Expect = 6.790e-13
Identity = 29/44 (65.91%), Postives = 37/44 (84.09%), Query Frame = 0 
Query:   19 VRIWDWEYYKEERALTGHGWDVKTVEWHPYKSLIVSGSKDNLIK 62
            VR+W +E  +EER +TGHGWDVK +EWHP + L+VSGSKDNL+K
Sbjct:  231 VRVWAFEEMREERCITGHGWDVKCIEWHPTRGLLVSGSKDNLVK 274
[Close]
BLAST of mRNA_L-elsbetiae_contig17157.4770.1 vs. uniprot
Match: A0A444XAA3_ARAHY (Uncharacterized protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444XAA3_ARAHY)

HSP 1 Score: 73.9 bits (180), Expect = 1.700e-12
Identity = 97/155 (62.58%), Postives = 111/155 (71.61%), Query Frame = 0 
Query:    1 ISFDVTHIHYTPTCRKKKVRIWDWEYYKEERALTG---HGWDVKTVEWHPYKSLIVSGSKDNLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPQHERLLASGGYDGKMMYWTVG 152
            +SF  T + +        V++WD+   +EER+LTG   HGWDVK+V+WHP KSL+VSG KD L+K              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHP HE    SG YDG + +W VG
Sbjct:   55 LSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDAKTGRELCSFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPFHEEYFVSGSYDGAIFHWLVG 209
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BLAST of mRNA_L-elsbetiae_contig17157.4770.1 vs. uniprot
Match: A0A074S8B2_9AGAM (Polyadenylation factor subunit 2 n=13 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A074S8B2_9AGAM)

HSP 1 Score: 73.6 bits (179), Expect = 2.320e-12
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0 
Query:   19 VRIWDWEYYKEERALTGHGWDVKTVEWHPYKSLIVSGSKDNLIK 62
            VRIW +   +EER +TGHGWDVK VEWHP + LIVSGSKDNL+K
Sbjct:  230 VRIWAFGETREERCITGHGWDVKCVEWHPTRGLIVSGSKDNLVK 273
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BLAST of mRNA_L-elsbetiae_contig17157.4770.1 vs. uniprot
Match: A9TB41_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TB41_PHYPA)

HSP 1 Score: 72.0 bits (175), Expect = 4.280e-12
Identity = 93/134 (69.40%), Postives = 106/134 (79.10%), Query Frame = 0 
Query:   20 RIWDWEYYKEERA-LTGHGWDVKTVEWHPYKSLIVSGSKDNLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPQHERLLASGGYDGKMMYWTVG 152
            ++WD+   +EE   LTGHGWDVK+V+WHP K+L+VSG+KDNL+K              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHP HE L  SG YDG +++W VG
Sbjct:  123 KVWDFARCQEESVYLTGHGWDVKSVDWHPQKALLVSGAKDNLVKLWDAKTGRVLCTLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPFHEDLFVSGSYDGSIIHWLVG 256
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BLAST of mRNA_L-elsbetiae_contig17157.4770.1 vs. uniprot
Match: A0A830DFI8_9LAMI (Flowering time control protein fy n=2 Tax=Orobanchaceae TaxID=91896 RepID=A0A830DFI8_9LAMI)

HSP 1 Score: 72.4 bits (176), Expect = 6.170e-12
Identity = 95/137 (69.34%), Postives = 106/137 (77.37%), Query Frame = 0 
Query:   19 VRIWDWEYYKEERALTG---HGWDVKTVEWHPYKSLIVSGSKDNLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPQHERLLASGGYDGKMMYWTVG 152
            V++WD+   +EER+LTG   HGWDVK V+WHP KSL+VSG KDNL+K             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHP HE    SG +DG + +W VG
Sbjct:  294 VKVWDFARCQEERSLTGDAGHGWDVKCVDWHPTKSLLVSGGKDNLVKLWDAKSGRELSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPFHEEYFVSGSFDGSIFHWLVG 430
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BLAST of mRNA_L-elsbetiae_contig17157.4770.1 vs. uniprot
Match: G4T5A0_SERID (Polyadenylation factor subunit 2 n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4T5A0_SERID)

HSP 1 Score: 72.0 bits (175), Expect = 6.240e-12
Identity = 31/62 (50.00%), Postives = 39/62 (62.90%), Query Frame = 0 
Query:    1 ISFDVTHIHYTPTCRKKKVRIWDWEYYKEERALTGHGWDVKTVEWHPYKSLIVSGSKDNLIK 62
            ISF      +        ++IW +   +EER LTGHGWDV+ V+WHP K L+ SGSKDNLIK
Sbjct:   31 ISFSPNDARFVTCSDDSTLKIWAFNESREERTLTGHGWDVRCVQWHPSKGLLASGSKDNLIK 92
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17157.4770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUK6_9PHAE2.140e-2079.61CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A4S4L1Z3_9AGAM2.000e-1370.45Polyadenylation factor subunit 2 n=1 Tax=Phellinid... [more]
UPI00200823752.690e-1351.61WD40 repeat-like protein n=1 Tax=Epithele typhae T... [more]
A0A152A6F6_9MYCE3.410e-1372.26WD40 repeat-containing protein n=1 Tax=Tieghemoste... [more]
A0A8H8SNN8_9AGAM6.790e-1365.91Polyadenylation factor subunit 2 n=2 Tax=Ceratobas... [more]
A0A444XAA3_ARAHY1.700e-1262.58Uncharacterized protein n=1 Tax=Arachis hypogaea T... [more]
A0A074S8B2_9AGAM2.320e-1270.45Polyadenylation factor subunit 2 n=13 Tax=Rhizocto... [more]
A9TB41_PHYPA4.280e-1269.40Predicted protein (Fragment) n=1 Tax=Physcomitrium... [more]
A0A830DFI8_9LAMI6.170e-1269.34Flowering time control protein fy n=2 Tax=Orobanch... [more]
G4T5A0_SERID6.240e-1250.00Polyadenylation factor subunit 2 n=1 Tax=Serendipi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 52..66
score: 39.05
coord: 94..108
score: 38.05
coord: 137..151
score: 32.59
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 26..65
e-value: 2.4E-6
score: 37.1
coord: 110..150
e-value: 8.9E-8
score: 41.8
coord: 68..107
e-value: 5.5E-10
score: 49.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 114..149
e-value: 1.0E-5
score: 26.2
coord: 31..65
e-value: 2.2E-7
score: 31.5
coord: 69..107
e-value: 1.0E-8
score: 35.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 33..74
score: 15.956
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 75..116
score: 14.452
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 117..152
score: 13.382
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..152
e-value: 9.8E-44
score: 152.1
NoneNo IPR availablePANTHERPTHR22836WD40 REPEAT PROTEINcoord: 17..152
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..152
score: 37.518
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 14..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17157contigL-elsbetiae_contig17157:1127..3338 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17157.4770.1mRNA_L-elsbetiae_contig17157.4770.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17157 1127..3338 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17157.4770.1 ID=prot_L-elsbetiae_contig17157.4770.1|Name=mRNA_L-elsbetiae_contig17157.4770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp
ISFDVTHIHYTPTCRKKKVRIWDWEYYKEERALTGHGWDVKTVEWHPYKS
LIVSGSKDNLIKLWDPRTGNSLSTLYGHKNTVMKVTWNKNGNWLVSCSRD
QTIKLYDIRTMKDMSTFKGHGQDVTALAWHPQHERLLASGGYDGKMMYWT
VG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf