prot_L-elsbetiae_contig1715.4767.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1715.4767.1
Unique Nameprot_L-elsbetiae_contig1715.4767.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length412
Homology
BLAST of mRNA_L-elsbetiae_contig1715.4767.1 vs. uniprot
Match: A0A6H5KAX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAX6_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 1.770e-39
Identity = 132/337 (39.17%), Postives = 175/337 (51.93%), Query Frame = 0
Query:   91 RGTRGEDNEHFKGATGKESLRVHETWQSRASPLPSSTALSPKFQALKHGSRQRADPGTCASLPTGSGRQFSNEGEGLNQHEDDFKEGSTTESAGESSLSSNGSGLDGDGGGILRVEDTLSGSGGACPSPGFEPPAEDMVDERVSDRDVEQRASTPAG-------------RGTKRQSDADFTLAQVIDHHMSRRRLNGVVSDRERVRVEPNSGCERRAASIDNAGSQNRHNLN---DGTWPSAGAGCCADATIVAAAWTNGCVLPLTEAVAPHMRLVAPIFAAEPEGRRVVVHTAAAVASAAAILALPGHRLEVTGTCRDGLLLELRP-----KEEG 406
            RG+R E    F     + ++   +T  S+ S LP  TA +PK Q       +    G   + PTGS   F +   GL++ + D K GST  +A  ++L+S   G+D   G     +   SG                    R++ R  E+ A T  G             RGTKR+S AD TL QVIDHHM+RRRL+G  +  +  R  P+S     ++    AG+      N   +G  PS        A +V AAW++GC+LPLTEA APHMRLVAP+ A EPEGRRVV+ TAAAVA+ AA LALP HR+EVTG  +DG+LLEL P     +EEG
Sbjct:  285 RGSREEKGPRFAFKQDEGNVNRGDTRCSKTSALPPPTA-TPKLQ-------RHPQAGKYVAPPTGSSPLFRDPATGLDRSQQDSKGGSTRNTARYATLTSTDRGVDRSRGCYGNYDGGHSG--------------------RINQRSCERTARTSKGFESGTKKKVAEARRGTKRRSTADVTLEQVIDHHMARRRLDGAANGPDGSRAGPHSSIGNASSHSTGAGADCLRGENLRSNGKRPSP-CSVSDGANLVVAAWSSGCILPLTEAAAPHMRLVAPLLAGEPEGRRVVLRTAAAVATGAAKLALPHHRVEVTGVWQDGILLELCPAPLVEREEG 592          
BLAST of mRNA_L-elsbetiae_contig1715.4767.1 vs. uniprot
Match: D7G8F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F4_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 3.260e-39
Identity = 125/322 (38.82%), Postives = 168/322 (52.17%), Query Frame = 0
Query:   92 GTRGEDNEHFKGATGKESLRVHETWQSRASPLPSSTALSPKFQALKHGSRQRADPGTCASLPTGSGRQFSNEGEGLNQHEDDFKEGSTTESAGESSLSSNGSGLDGDGGGILRVEDTLSGSGGACPSPGFEPPAEDMVDERVSDRDVEQRASTPAGRGTKRQSDADFTLAQVIDHHMSRRRLNGVVSDRERVRVEPNSGCERRAASIDNAGSQNRHNLNDGTWPSAGAGCCAD--ATIVAAAWTNGCVLPLTEAVAPHMRLVAPIFAAEPEGRRVVVHTAAAVASAAAILALPGHRLEVTGTCRDGLLLELRP-----KEEG 406
            G+R E+   F     +  +   +T  S+ S LP +TA + K Q       +    GTC   PTGS   F +   GL++ + D K GST  +A  ++ +S   G       I+R         G       +   E             ++    A RGTKR+S AD TL QVIDHHM+RRRL+G  +  +  R  P+S     ++    AG+      N  +     + C     AT+V AAW++GC+LPLTEA APHMRLVAP+ A EPEGRRVV+ TAAAVA+ AA LALP HR+EVTG  ++GLLLEL P     +EEG
Sbjct:  348 GSREEEGSRFAFTQDEGDMNRGDTRCSKTSALPPATATT-KLQ-------RHPQAGTCVGPPTGSSPLFRDPAGGLDRSQKDSKGGSTRSAARYATPTSTDRG-------IIRSRGCYGNYDGGRSGGVNQRSCERTARTSKGSESGTKKKVAEARRGTKRRSTADVTLEQVIDHHMARRRLDGAANGLDGSRAGPHSRIGNTSSHSTGAGTDRLRGENPRSNGKRPSPCSVSDGATLVVAAWSSGCILPLTEAAAPHMRLVAPLLAGEPEGRRVVLRTAAAVATGAAKLALPQHRVEVTGVWQNGLLLELCPAPLVEREEG 654          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1715.4767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAX6_9PHAE1.770e-3939.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8F4_ECTSI3.260e-3938.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1715contigL-elsbetiae_contig1715:9528..11075 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1715.4767.1mRNA_L-elsbetiae_contig1715.4767.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1715 9526..11075 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1715.4767.1 ID=prot_L-elsbetiae_contig1715.4767.1|Name=mRNA_L-elsbetiae_contig1715.4767.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=412bp
SGARPSGLDQEDIFEEHPGWKDGPPNEDESPGCRRQQFGERVEEDVKTSI
TTHPLEVAEPVHTVDLASARGDSICSTAKGTVTSNTKHRHRGTRGEDNEH
FKGATGKESLRVHETWQSRASPLPSSTALSPKFQALKHGSRQRADPGTCA
SLPTGSGRQFSNEGEGLNQHEDDFKEGSTTESAGESSLSSNGSGLDGDGG
GILRVEDTLSGSGGACPSPGFEPPAEDMVDERVSDRDVEQRASTPAGRGT
KRQSDADFTLAQVIDHHMSRRRLNGVVSDRERVRVEPNSGCERRAASIDN
AGSQNRHNLNDGTWPSAGAGCCADATIVAAAWTNGCVLPLTEAVAPHMRL
VAPIFAAEPEGRRVVVHTAAAVASAAAILALPGHRLEVTGTCRDGLLLEL
RPKEEGVRCSYS
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