prot_L-elsbetiae_contig171.4742.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig171.4742.1
Unique Nameprot_L-elsbetiae_contig171.4742.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length103
Homology
BLAST of mRNA_L-elsbetiae_contig171.4742.1 vs. uniprot
Match: D7FSK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK8_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 9.220e-55
Identity = 87/102 (85.29%), Postives = 93/102 (91.18%), Query Frame = 0
Query:    1 MSSVLTSALRRAATQPKPPAFRAATVVNLKRGMAGSEGTPKYGAAKSFKEAWLSDKGAWPVMGVIGFAVSFVTYWSLSTLATNPDVRINRTVRETVIRPPRS 102
            MSSV++SA+RRA  QPKPP FRAATV NL RGMA SEGTPKYGAAKSFKEAWLSDKGAWPVMGVIGFA++FVTYWS STL TNPDVRINRT+RET IRPPRS
Sbjct:    1 MSSVVSSAMRRAVMQPKPPMFRAATV-NLTRGMASSEGTPKYGAAKSFKEAWLSDKGAWPVMGVIGFAITFVTYWSFSTLLTNPDVRINRTIRETTIRPPRS 101          
BLAST of mRNA_L-elsbetiae_contig171.4742.1 vs. uniprot
Match: A0A6H5KK83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK83_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 9.520e-51
Identity = 83/102 (81.37%), Postives = 90/102 (88.24%), Query Frame = 0
Query:    1 MSSVLTSALRRAATQPKPPAFRAATVVNLKRGMAGSEGTPKYGAAKSFKEAWLSDKGAWPVMGVIGFAVSFVTYWSLSTLATNPDVRINRTVRETVIRPPRS 102
            MSSV++SA+RRA  QPKPP FR ATV NL RGMA  EG PKYGAAKSFKEAWLSD GAWPV+GVIGFAV+FVTYWS STLAT+PDVRINRT+RET IRPPRS
Sbjct:   27 MSSVVSSAMRRAVMQPKPPMFRTATV-NLTRGMASGEGAPKYGAAKSFKEAWLSDIGAWPVIGVIGFAVTFVTYWSFSTLATHPDVRINRTIRETTIRPPRS 127          
BLAST of mRNA_L-elsbetiae_contig171.4742.1 vs. uniprot
Match: A0A836CCP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCP5_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.160e-16
Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = 0
Query:   46 KSFKEAWLSDKGAWPVMGVIGFAVSFVTYWSLSTLATNPDVRINRTVRETVIRPPRS 102
            +S ++ WL DKGAWPV+G+IGFA+   TYW L+TLATNPDVRI++  R+  +R  +S
Sbjct:   38 RSVQQVWLGDKGAWPVIGIIGFALGLCTYWGLATLATNPDVRISKEGRKATLRSGKS 94          
BLAST of mRNA_L-elsbetiae_contig171.4742.1 vs. uniprot
Match: A0A7S1UJQ1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJQ1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.250e-11
Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 0
Query:   46 KSFKEAWLSDKGAWPVMGVIGFAVSFVTYWSLSTLATNPDVRINRTVRETVIR 98
            K+  E WL DKGAWP++G+IG A  F  +WS STL TNPDVRI +  R  +IR
Sbjct:  252 KAESEGWLDDKGAWPIIGIIGGAGMFCAFWSFSTLVTNPDVRIRKFNRSKIIR 304          
BLAST of mRNA_L-elsbetiae_contig171.4742.1 vs. uniprot
Match: A0A4D9DGT0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DGT0_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.270e-6
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0
Query:   41 KYGAAKSFKEAWLSDKGAWPVMGVIGFAVSFVTYWSLSTLATNPDVRINRTVRETVIR 98
            +YG  KSF   WL DKGAWPV+G+IG A+ F   +  + +  +PDVRI  + R   IR
Sbjct:   27 RYG--KSFGATWLGDKGAWPVIGIIGGALVFCGSFISNKIMFHPDVRITPSKRNADIR 82          
BLAST of mRNA_L-elsbetiae_contig171.4742.1 vs. uniprot
Match: W7TS82_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TS82_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.300e-5
Identity = 26/58 (44.83%), Postives = 36/58 (62.07%), Query Frame = 0
Query:   41 KYGAAKSFKEAWLSDKGAWPVMGVIGFAVSFVTYWSLSTLATNPDVRINRTVRETVIR 98
            +YG  KSF   WL DKGAWPV+G+IG A+ F   +  + +  +PDVRI  + R   I+
Sbjct:   47 RYG--KSFSATWLGDKGAWPVIGIIGGALVFCGSFISNKIMFHPDVRITPSKRNADIQ 102          
BLAST of mRNA_L-elsbetiae_contig171.4742.1 vs. uniprot
Match: A0A1W0A8T0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8T0_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 3.830e-5
Identity = 21/54 (38.89%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   44 AAKSFKEAWLSDKGAWPVMGVIGFAVSFVTYWSLSTLATNPDVRINRTVRETVI 97
            AA+S  + WLSD   +P++ +IGFA+S  T   +  + T+PDV+I+++ R T +
Sbjct:    7 AARSTAKTWLSDPATYPIIAIIGFAMSMGTIAGIRFVRTSPDVQIDKSKRTTTL 60          
BLAST of mRNA_L-elsbetiae_contig171.4742.1 vs. uniprot
Match: A0A7S4EEN0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEN0_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 5.740e-5
Identity = 28/79 (35.44%), Postives = 44/79 (55.70%), Query Frame = 0
Query:   30 KRGMAGSEGTPKYGAAK--------SFKEAWLSDKGAWPVMGVIGFAVSFVTYWSLSTLATNPDVRINRTVRETVIRPP 100
            +R  + + GTP +  AK        +FK  WLSD   +P++ V+G A++ +   S S L  NPDV+I+   R +V+R P
Sbjct:   22 RRQASTTTGTPAFIKAKRANAQNNANFKTNWLSDPATYPIIAVMGGAITLLVGVSSSCLMYNPDVQIDAKKRGSVLREP 100          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig171.4742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FSK8_ECTSI9.220e-5585.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KK83_9PHAE9.520e-5181.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCP5_9STRA4.160e-1656.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1UJQ1_9STRA1.250e-1156.60Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A4D9DGT0_9STRA1.270e-646.55Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TS82_9STRA1.300e-544.83Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A1W0A8T0_9STRA3.830e-538.89Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S4EEN0_9STRA5.740e-535.44Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010530NADH-ubiquinone reductase complex 1 MLRQ subunitPFAMPF06522B12Dcoord: 56..95
e-value: 3.8E-7
score: 29.8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 78..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..77
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..56
NoneNo IPR availableTMHMMTMhelixcoord: 58..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig171contigL-elsbetiae_contig171:5096..7510 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig171.4742.1mRNA_L-elsbetiae_contig171.4742.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig171 4179..7534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig171.4742.1 ID=prot_L-elsbetiae_contig171.4742.1|Name=mRNA_L-elsbetiae_contig171.4742.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=103bp
MSSVLTSALRRAATQPKPPAFRAATVVNLKRGMAGSEGTPKYGAAKSFKE
AWLSDKGAWPVMGVIGFAVSFVTYWSLSTLATNPDVRINRTVRETVIRPP
RS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010530B12D