prot_L-elsbetiae_contig171.4741.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig171.4741.1
Unique Nameprot_L-elsbetiae_contig171.4741.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length126
Homology
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A6H5J7G1_9PHAE (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7G1_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 1.180e-56
Identity = 97/125 (77.60%), Postives = 107/125 (85.60%), Query Frame = 0
Query:    1 MRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQPSREAKGMSGTAWLAFTVPVLLSAAYLYRR 125
            MRQIKDPEVFRFCAIPQVMAIATLAE+YNNP+VFRGVVKIRKGLACRMILESG+LEGIF WFNKLA  IA RVP  DPCASRT +VC IA +MT P+ +A   S T  + ++VPVLLSAAYLYRR
Sbjct:  567 MRQIKDPEVFRFCAIPQVMAIATLAEIYNNPDVFRGVVKIRKGLACRMILESGNLEGIFCWFNKLAEGIAARVPALDPCASRTTQVCKIAVDMTTPTGKALRTSRTKVVLYSVPVLLSAAYLYRR 691          
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A7S1TT08_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TT08_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.070e-30
Identity = 63/125 (50.40%), Postives = 82/125 (65.60%), Query Frame = 0
Query:    4 IKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQPSREAKGMSGTA-WLAFTVPV--LLSAAYLYRR 125
            +++PEVFRFCAIPQVMAIATL + YNNP+VF GVVKIRKG +C++IL+SG LEG+  WF  +A  +  R+P SDP   RT   C    E+T      K     A  L   VP+  ++ AAYL++R
Sbjct:  588 LRNPEVFRFCAIPQVMAIATLTKCYNNPDVFTGVVKIRKGQSCQLILDSGSLEGVHFWFYTMASDVLRRLPGSDPSFQRTEVACRTVLELTSERYSRKKFLNLAKTLNVIVPIGAVICAAYLFQR 712          
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A7S2FW13_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FW13_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.170e-29
Identity = 56/122 (45.90%), Postives = 83/122 (68.03%), Query Frame = 0
Query:    1 MRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQPSREAKGMSGTAWLAFTVPVLLSAAYL 122
            + ++ + +VFRFCAIPQVMAIATL + +NN +VF GVVK+RKGLA +MI+ESG ++GI +WFN+ A +I  ++ P+DP A+RT   C++  ++   +R    M G  +L F     L  A+L
Sbjct:   74 LERLNNDQVFRFCAIPQVMAIATLDKCFNNGDVFTGVVKVRKGLAVKMIMESGTMKGIETWFNRFAMSIKAKIDPNDPSAARTAAACDVVCKLCADNRPIV-MRGPGFLPFAALTALPFAFL 194          
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A0M0JED5_9EUKA (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JED5_9EUKA)

HSP 1 Score: 120 bits (300), Expect = 5.090e-29
Identity = 54/95 (56.84%), Postives = 71/95 (74.74%), Query Frame = 0
Query:    1 MRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQ 95
            +  +K PEVFRFCAIPQVMAIATL EV++NP+VF GVVKIRKGL  R++L+SG L+G++ WFN+LA  IA R P +DP   + L+   +   +TQ
Sbjct:  650 LEMLKTPEVFRFCAIPQVMAIATLEEVFDNPKVFTGVVKIRKGLTARLLLDSGSLDGVYVWFNRLARRIASRCPKNDPSREKILKATTVIVNLTQ 744          
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A7S2UWS2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWS2_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.120e-27
Identity = 55/119 (46.22%), Postives = 78/119 (65.55%), Query Frame = 0
Query:    4 IKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQPSREAKGMSGTAWLAFTVPVLLSAAYL 122
            +++PEVFRFCAIPQ+MAIAT+AEVYNN +VF GVVKIRKGLA ++IL+S  +EG+  WF   A  I  +V   D  A +T+E C    ++T    +  G++G   +   + VL +  Y+
Sbjct:  638 LRNPEVFRFCAIPQIMAIATMAEVYNNEKVFTGVVKIRKGLAAQLILDSSSIEGVHKWFYAFAQVIKAKVSEQDANAKKTVESCERIMDLTADKAKTHGVTGNKMMLVGLLVLPALGYV 756          
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A7S3UWZ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWZ9_HETAK)

HSP 1 Score: 112 bits (280), Expect = 2.610e-26
Identity = 52/95 (54.74%), Postives = 71/95 (74.74%), Query Frame = 0
Query:    1 MRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQ 95
            M ++++PEVFRFCAIPQVMAIATL +VYNNP+VF GV KIRKGLA +MI+++    G+  +F+  A  I  RVP  DP A++T EVC++   +T+
Sbjct:  857 MEKLRNPEVFRFCAIPQVMAIATLDKVYNNPDVFTGVAKIRKGLAVKMIVDTTSKSGLHHYFHSFAQRIKSRVPVEDPSATKTHEVCDLIITLTE 951          
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A6U3CCN3_9EUKA (Squalene synthase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6U3CCN3_9EUKA)

HSP 1 Score: 109 bits (273), Expect = 4.240e-26
Identity = 60/126 (47.62%), Postives = 78/126 (61.90%), Query Frame = 0
Query:    1 MRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQPSREAKGMSGTAWLAFTVP-VLLSAAYLYRR 125
            MR I++P  FRFCAIPQVMAIATLAEVYNN  VF+GVVKIRKGL+C++ILE+ D   +   F      I +++P  DP A +TLE    A  +  PS    G+  T   A  +   + S+ YLY +
Sbjct:  254 MRMIQNPMNFRFCAIPQVMAIATLAEVYNNTNVFKGVVKIRKGLSCKIILETNDFSSVRDAFRYFLNKIKDKIPKDDPNAPKTLERVKTALRLLGPST-GSGICATYTNAMLLAGTVASSYYLYMQ 378          
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A8J6C1C1_DIALT (Squalene synthase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C1C1_DIALT)

HSP 1 Score: 110 bits (275), Expect = 4.710e-26
Identity = 53/94 (56.38%), Postives = 66/94 (70.21%), Query Frame = 0
Query:    1 MRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMT 94
            M  I  P++FRFCAIPQVMAIATL +VYNN +VF GVVK+RKGLA +MI+  G + GI +WF++ A  I  R PPSDP A RT   C+    +T
Sbjct:  326 MTLITHPDIFRFCAIPQVMAIATLDKVYNNKDVFSGVVKVRKGLAVKMIMTCGTMGGIKAWFHEFAVEIKRRTPPSDPSAVRTYAACDRILTLT 419          
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A7S3BNE3_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BNE3_9EUKA)

HSP 1 Score: 110 bits (276), Expect = 7.350e-26
Identity = 55/122 (45.08%), Postives = 76/122 (62.30%), Query Frame = 0
Query:    4 IKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQPSREAKGMSGTAWLAFTVPVLLSAAYLYRR 125
            ++  EVFRFCAIPQVMAIATL   ++NP+VF GVVKIRKGLA R+I++S  ++G+  WF  LA  IA R P  DP   + L       ++T+P+  A   S    LAF    +   A++Y++
Sbjct:  463 LRTDEVFRFCAIPQVMAIATLEVCFDNPQVFTGVVKIRKGLAARLIVDSASMQGVHYWFYTLAKQIAIRCPADDPSRKKVLAATARIIQITEPAARATATSRQLMLAFATIAVAILAFMYQQ 584          
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Match: A0A7S2ECB1_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ECB1_9STRA)

HSP 1 Score: 108 bits (270), Expect = 5.650e-25
Identity = 53/103 (51.46%), Postives = 73/103 (70.87%), Query Frame = 0
Query:    1 MRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMILESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMT--QPSREAK 101
            + +++  EVFRFCAIPQVMAIATL + +NNP VF GVVKIRKGL+C++IL + D +G+ + F   A +IA ++ P+DP A  TL+ C+   E+T  Q SR  K
Sbjct:  569 LAKLRCTEVFRFCAIPQVMAIATLDKCFNNPNVFTGVVKIRKGLSCQLILHTNDAQGVHAAFRHFANSIASKINPNDPNADATLKACDAILEITAEQHSRATK 671          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig171.4741.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J7G1_9PHAE1.180e-5677.60Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A7S1TT08_9STRA3.070e-3050.40Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2FW13_9STRA1.170e-2945.90Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A0M0JED5_9EUKA5.090e-2956.84Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Ch... [more]
A0A7S2UWS2_9STRA2.120e-2746.22Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3UWZ9_HETAK2.610e-2654.74Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U3CCN3_9EUKA4.240e-2647.62Squalene synthase n=1 Tax=Lotharella globosa TaxID... [more]
A0A8J6C1C1_DIALT4.710e-2656.38Squalene synthase n=1 Tax=Diacronema lutheri TaxID... [more]
A0A7S3BNE3_9EUKA7.350e-2645.08Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2ECB1_9STRA5.650e-2551.46Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10coord: 1..94
e-value: 2.8E-24
score: 87.7
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 2..90
NoneNo IPR availablePANTHERPTHR11626:SF2SQUALENE SYNTHASEcoord: 1..101
NoneNo IPR availablePANTHERPTHR11626FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASEcoord: 1..101
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 124..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..123
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..104
NoneNo IPR availableTMHMMTMhelixcoord: 104..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig171contigL-elsbetiae_contig171:372..1108 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig171.4741.1mRNA_L-elsbetiae_contig171.4741.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig171 2..1929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig171.4741.1 ID=prot_L-elsbetiae_contig171.4741.1|Name=mRNA_L-elsbetiae_contig171.4741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp
MRQIKDPEVFRFCAIPQVMAIATLAEVYNNPEVFRGVVKIRKGLACRMIL
ESGDLEGIFSWFNKLAGAIAERVPPSDPCASRTLEVCNIAREMTQPSREA
KGMSGTAWLAFTVPVLLSAAYLYRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008949Isoprenoid_synthase_dom_sf