prot_L-elsbetiae_contig17096.4739.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17096.4739.1
Unique Nameprot_L-elsbetiae_contig17096.4739.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length130
Homology
BLAST of mRNA_L-elsbetiae_contig17096.4739.1 vs. uniprot
Match: A0A6H5L4G7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G7_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 4.210e-71
Identity = 115/121 (95.04%), Postives = 118/121 (97.52%), Query Frame = 0
Query:    1 VTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQGRRKDNDPLQTFEASELGADGSYG 121
            VTRV VREARAAELKAEI+NSQKLAGYFKENAGDL+VLRHDKSVLHPLRKLDHLKHIPDYLMP GLQTGEDPTQRQRKR+KRARGGAKRRQGQG DQGRRKDNDPLQTFEASELGADGSYG
Sbjct:   84 VTRVRVREARAAELKAEIINSQKLAGYFKENAGDLKVLRHDKSVLHPLRKLDHLKHIPDYLMPTGLQTGEDPTQRQRKRMKRARGGAKRRQGQGLDQGRRKDNDPLQTFEASELGADGSYG 204          
BLAST of mRNA_L-elsbetiae_contig17096.4739.1 vs. uniprot
Match: D7FNE7_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE7_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 4.130e-67
Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = 0
Query:    1 VTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQGRRKDNDPLQTFEASELGADGSYG 121
            VTRVSVREARAAELKAEIVNSQKLAGYFKENAGDL+VLRHDKSVLHPLRKLDHLKHIPDYLMP GLQTGEDPTQRQRKRIKRARGGAKRRQGQG DQGRRKDNDPLQTFEASELGADGSYG
Sbjct:  631 VTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLKVLRHDKSVLHPLRKLDHLKHIPDYLMPPGLQTGEDPTQRQRKRIKRARGGAKRRQGQGLDQGRRKDNDPLQTFEASELGADGSYG 751          
BLAST of mRNA_L-elsbetiae_contig17096.4739.1 vs. uniprot
Match: A0A835ZDE1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE1_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.840e-26
Identity = 56/82 (68.29%), Postives = 65/82 (79.27%), Query Frame = 0
Query:    1 VTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKR 82
            VTRV VREARAAEL+ E++NS  L  +FK +  DLRVLRHDK+ L+P  +LDHLKHIP YLMP GL TGEDPT+RQ KR KR
Sbjct:  503 VTRVMVREARAAELRRELINSHALDAHFKSHPDDLRVLRHDKTALNPALRLDHLKHIPSYLMPAGLATGEDPTERQAKRKKR 584          
BLAST of mRNA_L-elsbetiae_contig17096.4739.1 vs. uniprot
Match: A0A4D9D2A0_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2A0_9STRA)

HSP 1 Score: 101 bits (251), Expect = 3.600e-23
Identity = 55/109 (50.46%), Postives = 74/109 (67.89%), Query Frame = 0
Query:    1 VTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQGRRKDNDPLQTF 109
            VTR++V+EAR AE+K E++NSQ L  +F+EN  + ++LRHDK +L   R  +HLKH+PDYL+P G++ G DP  ++      A  G KR  GQG D  RRK NDPLQ F
Sbjct:  135 VTRMAVKEARLAEIKQELLNSQALKTHFQENPHEFQILRHDKGLLPSHRVQEHLKHVPDYLLPDGMRVGADPAAKKXXXXXXA--GRKRAVGQGADPQRRKGNDPLQHF 241          
BLAST of mRNA_L-elsbetiae_contig17096.4739.1 vs. uniprot
Match: A0A7R9UC43_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC43_9STRA)

HSP 1 Score: 102 bits (254), Expect = 9.390e-23
Identity = 44/75 (58.67%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    1 VTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQR 75
            VT ++++EARAAELK E++N+ +L  YF+EN  DL++LRHDK++LHP R  DHLKH+PDYL+P G++ G DP+QR
Sbjct:  589 VTAIAIKEARAAELKQEMLNNARLQNYFEENPQDLQLLRHDKTILHPTRVQDHLKHVPDYLIPDGIEVGADPSQR 663          
BLAST of mRNA_L-elsbetiae_contig17096.4739.1 vs. uniprot
Match: A0A7S0XN96_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S0XN96_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 5.490e-22
Identity = 54/124 (43.55%), Postives = 81/124 (65.32%), Query Frame = 0
Query:    1 VTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQGRRKDNDPLQTFEASELGADGSYGVKG 124
            VT+V++RE RAAE+KAEI+NS++L  +F EN  DL++L+HD+      +  DHLKH+P Y++PRG+Q  E   +R++K+ +  R  A R      ++GR K NDPLQ F+  ++  DG  G  G
Sbjct:  194 VTKVAIRETRAAEVKAEILNSERLQAHFDENPADLQLLQHDRQATKISKVQDHLKHVPTYMLPRGMQVAEVSRKRRKKKTRSQRIAASR-----AERGRNKSNDPLQNFDG-DVNMDGLVGDDG 311          
BLAST of mRNA_L-elsbetiae_contig17096.4739.1 vs. uniprot
Match: B8C552_THAPS (Dead-box RNA helicase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C552_THAPS)

HSP 1 Score: 98.2 bits (243), Expect = 2.420e-21
Identity = 50/109 (45.87%), Postives = 74/109 (67.89%), Query Frame = 0
Query:    1 VTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQGRRKDNDPLQTF 109
            VTRV+VRE RAAE+KAEI+NS++L  +F+EN  DL++L+HD+   H  +  DHLKH+P YL+PRG++  +   +R++K+ +  R  ++          R KDNDPLQ F
Sbjct:  430 VTRVAVRETRAAEVKAEILNSERLQSHFQENPADLQLLQHDRQATHISKVQDHLKHVPKYLLPRGMEVADVSRKRRKKKTRSQRMASR---------ARNKDNDPLQNF 529          
BLAST of mRNA_L-elsbetiae_contig17096.4739.1 vs. uniprot
Match: A0A1Z5KBW1_FISSO (ATP-dependent RNA helicase DDX56/DBP9 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBW1_FISSO)

HSP 1 Score: 98.2 bits (243), Expect = 2.810e-21
Identity = 51/109 (46.79%), Postives = 73/109 (66.97%), Query Frame = 0
Query:    1 VTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQGRRKDNDPLQTF 109
            VT+ +VREARA ELK E++NS++L  +F EN  DL++LRHD+   +  + LDHLKH+P YL+P+G+Q      +R++K++K   GG            RRKDNDPLQ+F
Sbjct:  484 VTKNTVREARANELKMELLNSERLESHFDENPADLQLLRHDRLATNVSKVLDHLKHVPKYLLPKGMQVANLNKKRKKKKVKHGTGGE-----------RRKDNDPLQSF 581          
BLAST of mRNA_L-elsbetiae_contig17096.4739.1 vs. uniprot
Match: A0A7S1XW79_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XW79_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 2.890e-21
Identity = 45/82 (54.88%), Postives = 65/82 (79.27%), Query Frame = 0
Query:    1 VTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPT-QRQRKRIK 81
            VT VS++EARAAELKAE++N+ +L  YF EN  DL++LRHDK+V+HP R  +HL+ +P YL+P G+  GEDP+ ++ RKR++
Sbjct:  180 VTSVSIKEARAAELKAELLNNARLQAYFDENPQDLQLLRHDKAVMHPTRMQEHLRSVPGYLIPDGIDVGEDPSLKKYRKRLR 261          
BLAST of mRNA_L-elsbetiae_contig17096.4739.1 vs. uniprot
Match: A0A448YUD8_9STRA (Uncharacterized protein n=5 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YUD8_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.170e-19
Identity = 53/121 (43.80%), Postives = 75/121 (61.98%), Query Frame = 0
Query:    1 VTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQGRRKDNDPLQTFEASELGADGSYG 121
            VT+ S++EARAAEL+AEI+NS++L  +F++N  DL++LRHD+   H  +  +HLKHIP YL+PRG+   +      RKR KR   G K+         RR   DPLQ+F   ++  DG  G
Sbjct:  500 VTKHSIKEARAAELRAEILNSERLQAHFEDNPNDLQLLRHDRLATHASKVQEHLKHIPKYLLPRGMHVAD----LNRKRKKRKNRGGKQ---------RRSAKDPLQSFSDGDVNLDGLEG 607          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17096.4739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4G7_9PHAE4.210e-7195.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNE7_ECTSI4.130e-6797.52DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835ZDE1_9STRA2.840e-2668.29DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A4D9D2A0_9STRA3.600e-2350.46Helicase C-terminal domain-containing protein n=1 ... [more]
A0A7R9UC43_9STRA9.390e-2358.67Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0XN96_9STRA5.490e-2243.55Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
B8C552_THAPS2.420e-2145.87Dead-box RNA helicase (Fragment) n=1 Tax=Thalassio... [more]
A0A1Z5KBW1_FISSO2.810e-2146.79ATP-dependent RNA helicase DDX56/DBP9 n=2 Tax=Fist... [more]
A0A7S1XW79_9STRA2.890e-2154.88Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A448YUD8_9STRA2.170e-1943.80Uncharacterized protein n=5 Tax=Pseudo-nitzschia T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17096contigL-elsbetiae_contig17096:850..3145 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17096.4739.1mRNA_L-elsbetiae_contig17096.4739.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17096 850..3145 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17096.4739.1 ID=prot_L-elsbetiae_contig17096.4739.1|Name=mRNA_L-elsbetiae_contig17096.4739.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp
VTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRK
LDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQGRR
KDNDPLQTFEASELGADGSYGVKGPGGAPR
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