prot_L-elsbetiae_contig17056.4726.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17056.4726.1
Unique Nameprot_L-elsbetiae_contig17056.4726.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length136
Homology
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BLAST of mRNA_L-elsbetiae_contig17056.4726.1 vs. uniprot
Match: A0A6H5J8B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8B2_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 3.750e-7
Identity = 44/83 (53.01%), Postives = 49/83 (59.04%), Query Frame = 0 
Query:   49 AEEVECDDAAPARRSKRARKEKSAFGEGPVGTVADRAGAGNXXXXXXXXXXXXXXXDKDASRRSASFSHSAHTSPFSTPTRTA 131
            A+E E D   PARRSKRARKEKS FG+ P    A  AG G+               +K A R S SFSHS HTSPFSTPTR+A
Sbjct: 1800 ADETEADGVIPARRSKRARKEKSTFGDSPERPTA-AAGRGSSGSGREAAGK-----EKGAPRPS-SFSHSTHTSPFSTPTRSA 1875
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BLAST of mRNA_L-elsbetiae_contig17056.4726.1 vs. uniprot
Match: D7G5K5_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K5_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 3.780e-7
Identity = 44/83 (53.01%), Postives = 49/83 (59.04%), Query Frame = 0 
Query:   49 AEEVECDDAAPARRSKRARKEKSAFGEGPVGTVADRAGAGNXXXXXXXXXXXXXXXDKDASRRSASFSHSAHTSPFSTPTRTA 131
            A+E E D   PARRSKRARKEKS FG+ P    A  AG G+               +K A R S SFSHS HTSPFSTPTR+A
Sbjct: 2372 ADEAEADGVIPARRSKRARKEKSTFGDSPERPTA-AAGRGSSGSGREAAGK-----EKGAPRPS-SFSHSTHTSPFSTPTRSA 2447
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17056.4726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J8B2_9PHAE3.750e-753.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5K5_ECTSI3.780e-753.01Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17056contigL-elsbetiae_contig17056:1776..2183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17056.4726.1mRNA_L-elsbetiae_contig17056.4726.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17056 1776..2184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17056.4726.1 ID=prot_L-elsbetiae_contig17056.4726.1|Name=mRNA_L-elsbetiae_contig17056.4726.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=136bp
VDPDSESQDASRAAVAAEEVDGGEPEQEKEELDAEDGGRQEGAAAESGAE
EVECDDAAPARRSKRARKEKSAFGEGPVGTVADRAGAGNSGGGGGGGRGK
EPRKDKDASRRSASFSHSAHTSPFSTPTRTASPSAS
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