prot_L-elsbetiae_contig17033.4714.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17033.4714.1
Unique Nameprot_L-elsbetiae_contig17033.4714.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length59
Homology
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BLAST of mRNA_L-elsbetiae_contig17033.4714.1 vs. uniprot
Match: D7FTZ3_ECTSI (EDR2_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTZ3_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 4.130e-19
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 0 
Query:    5 QVGLPSMFARFSGKPILLYGKESSMVRGPGFAELDLNAHAFSYVGRK 51
            +VGLPS+  RFSGKPILLYGKESSMV+GPG+ ELDLNAHAFSYVGRK
Sbjct: 1113 EVGLPSIARRFSGKPILLYGKESSMVKGPGYVELDLNAHAFSYVGRK 1159
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BLAST of mRNA_L-elsbetiae_contig17033.4714.1 vs. uniprot
Match: A0A835Z8Q7_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q7_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.870e-8
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 0 
Query:    6 VGLPSMFARFSGKPILLYGKESSMVR--GPGFAELDLNAHAFSYVGR 50
            VGLPS   +F+ +PIL++G+ESS  R    G AELD+NAH FSY+GR
Sbjct:  405 VGLPSFCRKFNARPILIHGRESSFTRDVAKGRAELDVNAHNFSYIGR 451
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17033.4714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTZ3_ECTSI4.130e-1985.11EDR2_C domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A835Z8Q7_9STRA2.870e-857.45EDR2_C domain-containing protein n=1 Tax=Tribonema... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17033contigL-elsbetiae_contig17033:318..494 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17033.4714.1mRNA_L-elsbetiae_contig17033.4714.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17033 318..494 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17033.4714.1 ID=prot_L-elsbetiae_contig17033.4714.1|Name=mRNA_L-elsbetiae_contig17033.4714.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=59bp
MLYIQVGLPSMFARFSGKPILLYGKESSMVRGPGFAELDLNAHAFSYVGR
KVCVCVCV*
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