prot_L-elsbetiae_contig1702.4701.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1702.4701.1
Unique Nameprot_L-elsbetiae_contig1702.4701.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length315
Homology
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BLAST of mRNA_L-elsbetiae_contig1702.4701.1 vs. uniprot
Match: D7FGV5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV5_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 9.120e-104
Identity = 205/315 (65.08%), Postives = 233/315 (73.97%), Query Frame = 0 
Query:    2 GSFARLLSSLVHSQDTADAAHAILADIHVAHSDGDEGLNDNSNSSTSNAYDAASNSRYVAILDAGA---GRFWAKRNRGGGNXXXXXXXD--GTVSAGSSVVVTESFVVRDAGLTVRAGTVCDVIQGNSNGGSSDASGNNIHVRFSHPRPPWVVLVSRLHATSAELQGSGLRFSEAAALSMAEQVSDTKAVVDLMNSVFRHSECGPLRAETVMRSCRAQAWLFAEGLPHLARLLKESRRTLKGELRTGRCYEDPYAKAELDSFGGEAALLAAFQALGDPLPLSDGSDCFAAQLPRVLVGILRSLLPLVQAHPPPR 311
            GSF+ LLSSLVH+QDTAD AHAILA +   H++ D   +D     + N       +RYVA+L A      R WAK   GG  XXXXXXX   G VSAGSSVVVT++F V D G+TV  GTVC V++G    G       NIHV+F H +PPWV LV RL+AT AELQG G RFSEA+ALS+AE++SD +AVV LMNSVFRHSECGPLRAETV+RSC AQ WL A G  HLARLLKESRRTL+GELRTGRCY DPYAKAELD  GG AALL+AFQA G+PLP +DGS CFAAQLPR+LVGILR LLPLV AHPP R
Sbjct: 1102 GSFSLLLSSLVHNQDTADIAHAILAGLD--HNEEDLDYDDGGGVDSGN-------NRYVAMLSARGPKESRLWAKWPTGGRRXXXXXXXXXXGFVSAGSSVVVTQAFAVTDTGMTVPRGTVCSVVEGVDEWG-------NIHVKFPHRQPPWVALVGRLYATLAELQGMGGRFSEASALSVAERLSDAQAVVGLMNSVFRHSECGPLRAETVLRSCAAQDWLVAGGFEHLARLLKESRRTLEGELRTGRCYADPYAKAELDDAGGAAALLSAFQADGNPLPTNDGSSCFAAQLPRILVGILRHLLPLVAAHPPQR 1400
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1702.4701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGV5_ECTSI9.120e-10465.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1702contigL-elsbetiae_contig1702:1293..8526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1702.4701.1mRNA_L-elsbetiae_contig1702.4701.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1702 1291..8526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1702.4701.1 ID=prot_L-elsbetiae_contig1702.4701.1|Name=mRNA_L-elsbetiae_contig1702.4701.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=315bp
MGSFARLLSSLVHSQDTADAAHAILADIHVAHSDGDEGLNDNSNSSTSNA
YDAASNSRYVAILDAGAGRFWAKRNRGGGNEDEDGGGDGTVSAGSSVVVT
ESFVVRDAGLTVRAGTVCDVIQGNSNGGSSDASGNNIHVRFSHPRPPWVV
LVSRLHATSAELQGSGLRFSEAAALSMAEQVSDTKAVVDLMNSVFRHSEC
GPLRAETVMRSCRAQAWLFAEGLPHLARLLKESRRTLKGELRTGRCYEDP
YAKAELDSFGGEAALLAAFQALGDPLPLSDGSDCFAAQLPRVLVGILRSL
LPLVQAHPPPRHQHH
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