prot_L-elsbetiae_contig1701.4697.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1701.4697.1
Unique Nameprot_L-elsbetiae_contig1701.4697.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length585
Homology
BLAST of mRNA_L-elsbetiae_contig1701.4697.1 vs. uniprot
Match: A0A6H5KQZ1_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ1_9PHAE)

HSP 1 Score: 624 bits (1610), Expect = 1.580e-200
Identity = 387/588 (65.82%), Postives = 414/588 (70.41%), Query Frame = 0
Query:    1 KVPLDVCAYACQLLGASLFVASRVGPPDRWAALASVVPEEGIDGLLECLRVVPARAKAARALFYAAKAPLAGGTGGELVESRGGVTIMLEVLETLPLTPPAAAXXXXXXGAGADIKGLRVWLCATLQPVIADRPRAVQAFMASRGIPLLCRQLVAGPADIAVHACGVIASALRRSGXXXXXXXSGAVPGSEIEAVDADVIAPLLSMLAGGNNKDTHASALAMELLAILASHPPCSDRLRSAGTIGAVAACLEDLPGGSXXXXXXXXXXXXGVTGAKASLMQLALIVLARFLRGGGGXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEIALTKAHVRALCLLSASDPKLRFPAAELVLQLSRRCDRAPARSFSATAAAAADGRSPPPNIAKDMIEAGGLRALWAVCSDPSPMARPVALEALATILGTAAAMSRSSASSEAILALVSEDAVGKLVREHVDPALAVLGGRDAAXXXXXXXXXXXXXDNAVA---VATSALLALHFLACNPDPAVYGLFVAAAGVDEQGRENGXXXXXXSRSTWSLILSSVETGADGRAGPAFLEAALLAAGSVCGAPPLPVLGGGGG 585
            +VPLDVC +ACQLLGASLFVASR   P  W  L  V+PE G+DGLLECLRV PARAKAARALFYAAK PLAGGTGGEL+ESRGGV+IMLEVLE+LPL PP  A          + KGLRVWLCATLQPV+ADRPRAVQAF+A RGIPLLCRQLVAGPADIAVH CGV+ASALR   XXXXXXX  AVP S IEAVDA +I PLL MLAGG +KD HASALAMELL +LASHPP S RLR+AGTI AVAACLED P                    +ASLMQLALIVL  FLRG G     +                            AEIA T+AHVR + LLSA DPKLRF  AEL LQLSRRC   PA + +         R     IAKDMIEAGGL ALW  CSDPSPMARPVALEALA +LGTAAAMSRS ASSEA+LALVSE AV  LVR+HVDPAL+VLG R                  A     VATSALLALHFLA NPDPAV+GLFV AAGVDEQ     XXXXX S  TWS ILSSVE GA+GR GPAFLEAALLAAGSVCGAPPLPVLG GGG
Sbjct:  139 EVPLDVCTHACQLLGASLFVASRQSSPKTWVDLVKVIPEGGVDGLLECLRVAPARAKAARALFYAAKVPLAGGTGGELIESRGGVSIMLEVLESLPLAPPPTA--------AVETKGLRVWLCATLQPVMADRPRAVQAFLACRGIPLLCRQLVAGPADIAVHVCGVLASALRSGXXXXXXXXXAAVPRSAIEAVDASIIDPLLGMLAGGTSKDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLEDHPARGAAAAEPV---------TRASLMQLALIVLTGFLRGDGDQPAAAAEAKVDEIA-------------------AEIAATRAHVRVVALLSAPDPKLRFTTAELALQLSRRCRPGPAPNSN---------RGGGGGIAKDMIEAGGLGALWRACSDPSPMARPVALEALAAMLGTAAAMSRSRASSEAVLALVSEGAVEGLVRQHVDPALSVLGRRGRGVAGGGSATIPGDAAAAATXXXVATSALLALHFLAANPDPAVHGLFVVAAGVDEQXXXXXXXXXXSS--TWSTILSSVEAGAEGRGGPAFLEAALLAAGSVCGAPPLPVLGVGGG 679          
BLAST of mRNA_L-elsbetiae_contig1701.4697.1 vs. uniprot
Match: D7FT64_ECTSI (E3 ubiquitin-protein ligase Nedd-4, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT64_ECTSI)

HSP 1 Score: 522 bits (1344), Expect = 1.290e-162
Identity = 305/471 (64.76%), Postives = 328/471 (69.64%), Query Frame = 0
Query:    1 KVPLDVCAYACQLLGASLFVASRVGPPDRWAALASVVPEEGIDGLLECLRVVPARAKAARALFYAAKAPLAGGTGGELVESRGGVTIMLEVLETLPLTPPAAAXXXXXXGAGADIKGLRVWLCATLQPVIADRPRAVQAFMASRGIPLLCRQLVAGPADIAVHACGVIASALRRSGXXXXXXXSGAVPGSEIEAVDADVIAPLLSMLAGGNNKDTHASALAMELLAILASHPPCSDRLRSAGTIGAVAACLEDLPGGSXXXXXXXXXXXXGVTGAKASLMQLALIVLARFLRGGGGXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEIALTKAHVRALCLLSASDPKLRFPAAELVLQLSRRCDRAPARSFSATAAAAADGRSPPPNIAKDMIEAGGLRALWAVCSDPSPMARPVALEALATILGTAAAMSRSSASSEAILALVSEDAVGKLVREHVDPALAVLGGR 471
            +VPLDVC +ACQLLGASLFVASR   P+ W  L  V+PE  +DGLLECLRV PARAKAARALFYAAK PLAGGTGGEL+ESRGGV+IMLEVLE+LPL PP  A          + KGLRVWLCATLQPV+ADRPRAVQAF+A RGIPLLCRQL AGPADIAVH CGV+ASALR  G       S AVP S IE VDA +I PLL MLAGG NKD HASALAMELL +LASHPP S RLR+AGTI AVAACLED P                   A+ASLMQLALIVL  FLRG G                                  AEIA T+AHVR + LLSA DPKLRF AAEL LQLSRRC   PA                   IAKDMIEAGGL ALW+ CSDPSPMARPVALEALA +LGTAAAMSRSSASSEA+LALVSE AVG LVR+HVDPAL+VLG R
Sbjct:  305 EVPLDVCTHACQLLGASLFVASRQSSPETWVGLVKVIPEGCVDGLLECLRVAPARAKAARALFYAAKVPLAGGTGGELIESRGGVSIMLEVLESLPLAPPPTA--------AVETKGLRVWLCATLQPVMADRPRAVQAFLACRGIPLLCRQLAAGPADIAVHVCGVLASALRSGGAGAGAGSSAAVPRSAIETVDASIIDPLLGMLAGGTNKDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLEDHPARGAAAAAAEPV-------ARASLMQLALIVLTGFLRGDGDQPAAVAATGEVDEVA------------------AEIAATRAHVRVVALLSAPDPKLRFTAAELALQLSRRCRPGPAXXXX--------XXXXXXGIAKDMIEAGGLGALWSACSDPSPMARPVALEALAAMLGTAAAMSRSSASSEAVLALVSEGAVGGLVRQHVDPALSVLGRR 734          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1701.4697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQZ1_9PHAE1.580e-20065.82FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FT64_ECTSI1.290e-16264.76E3 ubiquitin-protein ligase Nedd-4, putative n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 3..295
e-value: 1.7E-9
score: 38.9
coord: 325..524
e-value: 1.5E-5
score: 25.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 113..456

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1701contigL-elsbetiae_contig1701:21455..23994 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1701.4697.1mRNA_L-elsbetiae_contig1701.4697.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1701 21453..23994 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1701.4697.1 ID=prot_L-elsbetiae_contig1701.4697.1|Name=mRNA_L-elsbetiae_contig1701.4697.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=585bp
KVPLDVCAYACQLLGASLFVASRVGPPDRWAALASVVPEEGIDGLLECLR
VVPARAKAARALFYAAKAPLAGGTGGELVESRGGVTIMLEVLETLPLTPP
AAAAGAAGAGAGADIKGLRVWLCATLQPVIADRPRAVQAFMASRGIPLLC
RQLVAGPADIAVHACGVIASALRRSGGGGGGGGSGAVPGSEIEAVDADVI
APLLSMLAGGNNKDTHASALAMELLAILASHPPCSDRLRSAGTIGAVAAC
LEDLPGGSSSSSSAAAAAAAGVTGAKASLMQLALIVLARFLRGGGGGGGG
SGGGSGGGDGGGDGGGDSSGERGGAEGVAAEIALTKAHVRALCLLSASDP
KLRFPAAELVLQLSRRCDRAPARSFSATAAAAADGRSPPPNIAKDMIEAG
GLRALWAVCSDPSPMARPVALEALATILGTAAAMSRSSASSEAILALVSE
DAVGKLVREHVDPALAVLGGRDAAAAAAGGTRPSPPPDNAVAVATSALLA
LHFLACNPDPAVYGLFVAAAGVDEQGRENGGGGGGGSRSTWSLILSSVET
GADGRAGPAFLEAALLAAGSVCGAPPLPVLGGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold