prot_L-elsbetiae_contig1701.4695.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1701.4695.1
Unique Nameprot_L-elsbetiae_contig1701.4695.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length94
Homology
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BLAST of mRNA_L-elsbetiae_contig1701.4695.1 vs. uniprot
Match: A0A6H5KQZ1_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ1_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 6.300e-28
Identity = 66/88 (75.00%), Postives = 74/88 (84.09%), Query Frame = 0 
Query:    5 SLGPRSLELLATAAANPRLRPLLVESPRFPEVLDLLMLERHLDGASASS---LPVALGALGVVRAAASDRGTALRLVKLGIVSKLAAL 89
            SLGPRSL LLA AAANPRLRP+LV+SP+FP VLDLLM+ RHLDGAS+++   L VALGAL VV AA SD  TA RLVKLG+VSKLAAL
Sbjct:  886 SLGPRSLALLAKAAANPRLRPMLVDSPKFPAVLDLLMVGRHLDGASSNNAIPLEVALGALSVVEAAVSDERTASRLVKLGVVSKLAAL 973
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BLAST of mRNA_L-elsbetiae_contig1701.4695.1 vs. uniprot
Match: D7FT64_ECTSI (E3 ubiquitin-protein ligase Nedd-4, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT64_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.250e-15
Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 0 
Query:    5 SLGPRSLELLATAAANPRLRPLLVESPRFPEVLDLLMLERHLDGASASSLP 55
            SLGPRSL LLA AAANPRLRP+LV+SP+FP VLDLLM+ERHLDGAS+   P
Sbjct:  900 SLGPRSLALLAKAAANPRLRPMLVDSPKFPAVLDLLMVERHLDGASSVEAP 950
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1701.4695.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQZ1_9PHAE6.300e-2875.00FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FT64_ECTSI1.250e-1578.43E3 ubiquitin-protein ligase Nedd-4, putative n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1701contigL-elsbetiae_contig1701:19102..20734 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1701.4695.1mRNA_L-elsbetiae_contig1701.4695.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1701 19102..20734 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1701.4695.1 ID=prot_L-elsbetiae_contig1701.4695.1|Name=mRNA_L-elsbetiae_contig1701.4695.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=94bp
MGNDSLGPRSLELLATAAANPRLRPLLVESPRFPEVLDLLMLERHLDGAS
ASSLPVALGALGVVRAAASDRGTALRLVKLGIVSKLAALVRQKP
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