prot_L-elsbetiae_contig1701.4694.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1701.4694.1
Unique Nameprot_L-elsbetiae_contig1701.4694.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1460
Homology
BLAST of mRNA_L-elsbetiae_contig1701.4694.1 vs. uniprot
Match: D7FT64_ECTSI (E3 ubiquitin-protein ligase Nedd-4, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT64_ECTSI)

HSP 1 Score: 734 bits (1895), Expect = 5.980e-229
Identity = 711/1471 (48.33%), Postives = 789/1471 (53.64%), Query Frame = 0
Query:   46 AGRREEVCAALRVLAGLAEHEACVSLVLEKEDLGFLLQVVREATTSPQNSNXXXXXXXXXQVKAEMREEVEDALLCLLPLTARXXXXXXXXXSRSGSASLVNRALGLAATSPAHPGLDALLHLASAEGGTALQVVFQLVAAADAAKSVPSSPVLRPLVDGRHAAVLERLLGPVPFAWQDERGSAKPKHASVVRAARARACDALRRACEEQAFSPASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVGAIVAGLLPLVLSLAGTTVEGARCLRALFAAEGGVGEAARAAVLLPRDATRLEGXXXXXXXXXXXXXXXXXXXXXXXIRAVVGLLESEQVEIRAAGASILRRLIFDPSPDQXXXXXXXXXXXXXXXYRDTLVATPAPSCRALLASLDACEGRWEAVRSLSSLGLFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGAFD-------------------------------------AAGCV-------EGFDGRESEALSAVCVDALRALATDAFTGPLEKARCLSLLADLAVDPRCARTLFRGGAVPQMLLNAQGCTHAELVDLHGGGSG---------SDGRASPASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHEAVPAEPVASSPAAAGRSSEAVCCRCRQAMRLLARLVRGLPGETPAVLVRHSGLRSIVQILEDGAAEAAALAAVPADGDGCRLPAATEAAVREALELFVALSEQGPHRRALVGTPGLLLSASSYVXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAEASAFRLLGNLAHSDSARRRITKLDGLVLAAARALSASAQELGPSPSPSXXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXVGVGEAAAALLGRLTPVLGVEGGEDELVAAGEALSAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGRLSELASEALSGLLVLSWSDSCSLDTAAAVDSFITDAGLADGVVALWRRATTATTAAASADFGTLPASALALMSSISCRPTGRQALVAAGAASAVIAVALRPSDTSVGXXXXXXXXXXXXXXXXXXXXSGGLRLTVAERSEAIRLLCVLCASPAHRVAVRSSLVMATARERRGDGGDGAGGEDEFEAELDEGDVEAAIVRIQGGNGGSMSGLQDCRAGACRLAFLLGVAPPAAAPSRRLPHRSTAAGAGAFAADHLSAP----VPVGGRRGPPQTXXXXXXXXXXXXAYPPHPAIPGAANRTNRGAFSERSGGXXGSSRGWAGEASRMEDDAASVDSQELEEALFPTTAATAGAPAAGSGAPQARPEGSGLPSLPRIPSVISAAATAPAPARSWRPLPPAPAAAPSNARSDSEESLHRLLSMIAKAEGEEDXXXXXXXXXXXXXXXXXXXXXXDSEAGEDKTECKNCGKLVFAPTGFDLALIDCPHCGQSMG 1459
            A RREEVCA LRVLAGLA HEACV LVLE EDLG LLQ + E  T                V+A+MREE+EDAL CLLPL  R               S +NRALGL ATSPAHPGLDALLHLASAEGG ALQVVFQLVAA DAAKSVPSSPVLRPL DGRH AVL+ LLGP  F WQ   G       S V+AARARACDALR AC E + S +SA                                     DV A VA + PLVL LAGTT+EGARCLRA+FAA GGVGEAA+AAVL         G                       I A+V +L S  VEIRAAGASILR+L+F  +                        A     CRALL SL AC GR EA+RSLSS GLFG                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                           A G V       EGFD +ESEALS VCV+AL+ALATD FTGPLEKARCLSLLADLA+DPRCARTLF+GGA+PQMLLNAQGCTH +L+D+HG   G         SDGRASP   XXXXXXXXXXXXXXXXXXXXXXXXXX            A  V+ S   AG    AVCCRCRQA RLLARLVRGLPGETPAV+VRHSGLRS+VQILEDGAAEA A      +G G R+P ATEAAVREALELFVALSEQ PHR AL   PGL  SASSY+                            SAE SAFRLL NLA +D+ RRR+ +LDGLVLA+ARAL                      XXXXXXXXXXXX XXXXXXXXXXXX     AAAALL RL+PVLG +GGE+ELVAAGEALSAAVA                                         LASEAL  LLVLSW+DS SLD AAAVD F+TD+  AD VV+LWRR    +   AS+ FG L  +ALA MSSI+ RPTGR++LVAAGAASAV+ VAL       G                        +L+V+ER E IRLLCVLCASPAHR AVRSSL+     E        +GG+D                                                                 GAFAA++LS+      P    R PP       XXXXXXX               +R A                  A+ +EDD AS  S +LEEALFPT  ATA    A  G+P AR       +L R    ++  A+A APA   R        AP N RSDSEESLHRLLSMIA  +                           +E  +DK  C++CGKLVFAPTGFDLALI+CPHC + MG
Sbjct:  949 APRREEVCAGLRVLAGLAAHEACVPLVLESEDLGCLLQGIPEGMTPTPAVGRETPGGHGPPVRAQMREEMEDALRCLLPLKGRPQ-----------QRSSLNRALGLVATSPAHPGLDALLHLASAEGGPALQVVFQLVAA-DAAKSVPSSPVLRPLGDGRHPAVLKGLLGPADFPWQG--GIGPSARDSAVKAARARACDALRHACSELSPSSSSAPAAARDTGNPTGDGGDSAEAGPGGNVTAGSGKL----DVEA-VAEVFPLVLPLAGTTLEGARCLRAMFAARGGVGEAAQAAVLRRGVVGDAAGAGAGG------------------IGAIVAMLHSTYVEIRAAGASILRKLVFPTAAPTHRPEGGGQA-----------AAASIRPCRALLESLHACGGRSEALRSLSSFGLFGEQDQAAVPGGTLSVIDNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAAEGLVGWNGGGEEGFDAQESEALSGVCVEALQALATDNFTGPLEKARCLSLLADLALDPRCARTLFQGGAIPQMLLNAQGCTHVDLIDVHGDRGGXXXXXXXXXSDGRASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQRV--------AVGVSGSVTTAG----AVCCRCRQATRLLARLVRGLPGETPAVVVRHSGLRSVVQILEDGAAEAKAAT----EGTGGRIPTATEAAVREALELFVALSEQKPHRGALADLPGLARSASSYIVSATTASTSSSSPQAGED---------SSAEESAFRLLANLAFADAPRRRVLELDGLVLASARALX---------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAALLCRLSPVLGADGGEEELVAAGEALSAAVAAVSMAAAGRDFTA-----------------------ATAGGLASEALYALLVLSWADSSSLDAAAAVDGFVTDSRFADSVVSLWRRGMAPS---ASSGFGALSETALATMSSIAARPTGRKSLVAAGAASAVVDVAL-------GRQGGGGDVAGDSEGGCSQTMMMAPQLSVSERGEIIRLLCVLCASPAHRGAVRSSLMAKRGVE--------SGGDDTX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFAAEYLSSGDHRRTPF---RSPPTGDAVIKXXXXXXXXXXXXXXXXXXYAGDSRAA------------------AAGLEDDIAS--SVDLEEALFPTATATA---VAHLGSPGARD------TLSRAAVAVAPVASARAPAAGRRDHALLTFPAPKNGRSDSEESLHRLLSMIANEDNSS------AAAASATANGSLSGAVVGAEERDDKIACESCGKLVFAPTGFDLALIECPHCQKPMG 2238          
BLAST of mRNA_L-elsbetiae_contig1701.4694.1 vs. uniprot
Match: A0A6H5KQZ1_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ1_9PHAE)

HSP 1 Score: 570 bits (1470), Expect = 1.310e-169
Identity = 625/1427 (43.80%), Postives = 699/1427 (48.98%), Query Frame = 0
Query:   44 ELAGRREEVCAALRVLAGLAEHEACVSLVLEKEDLGFLLQVVREATTSPQNSNXXXXXXXXXQVKAEMREEVEDALLCLLPLTARXXXXXXXXXSRSGSASLVNRALGLAATSPAHPGLDALLHLASAEGGTALQVVFQLVAAADAAKSVPSSPVLRPLVDGRHAAVLERLLGPVPFAWQDERGSAKPKHASVVRAARARACDALRRACEEQAFSPASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVGAIVAGLLPLVLSLAGTTVEGARCLRALFAAEGGVGEAARAAVLLPRDATRLEGXXXXXXXXXXXXXXXXXXXXXXXIRAVVGLLESEQVEIRAAGASILRRLIF-DPSPDQXXXXXXXXXXXXXXXYRDTLVATPAPSCRALLASLDACEGRWEAVRSLSSLGLFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGAFDAAGCVEGFDGRESEALSAVCVDALRALATDAFTGPLEKARCLSLLADLAVDPRCARTLFRGGAVPQMLLNAQGCTHAE----LVDLHGGGS-GSDGRASPASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHEAVPAEPVASSPAAAGRSSEAVCCRCRQAMRLLARLVRGLPGETPAVLVRHSGLRSIVQILEDGAAEAAALAAVPADGDGCRLPAATEAAVREALELFVALSEQGPHRRALVGTPGLLLSASSYVXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAEASAFRLLGNLAHSDSARRRITKLDGLVLAAARALSASAQELGPSPSPSXXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXVGVGEAAAALLGRLTPVLGVEGGEDELVAAGEALSAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGRLSELASEALSGLLVLSWSDSCSLDTAAAVDSFITDAGLADGVVALWRRATTATTAAASADFGTLPASALALMSSISCRPTGRQALVAAGAASAVIAVALRPSDTSVGXXXXXXXXXXXXXXXXXXXXSGGLRLTVAERSEAIRLLCVLCASPAHRVAVRSSLVMATARERRGDGGDGAGGEDEFEAELDEGDVEAAIVRIQGGNGGSMSGLQDCRAGACRLAFLLGVAPPAAAPSRRLPHRSTAAGAGAFAADHLSAPVPVGGRRGPPQTXXXXXXXXXXXXAYPPHPAIPGAANRTNRGAFSERSGGXXGSSRGWAGEASRMEDDAASVDSQELEEALFPTTAATAGAPAAGSGAPQARPEGSGLPSLPRIPSVISAAATAPAPARSWRP-----LPPAPAAAPSNARSDSEESLHRLLSMIAKAEGEEDXXXXXXXXXXXXXXXXXXXXXXDSEAGEDKTECKNCGKLVFAPTGFDLALIDCPHCGQSMG 1459
            E+   R+EVCA LRVLAGLA HEACV LVLE EDLG LLQV+REA T    +          +V+AEMREEVEDAL CLL LTAR               S +NRALGL ATSPAHP LDALL+LAS EGG ALQ                                     GP  F WQ   G A     SVV+AARARACDALRRAC E  +  +S                                      DV A VA + PLV SLA TT+EGARCLRA+FAA GGVGEAA+AAVL  R     +G                       I A+V +L S+ VEIRAAGASILR+L+F   +P  XXXXXXXXXXXXXXX   T        CRALL SL AC GR EA+RSL S+GLFG                                             XXXXXX   G     AGC      R+  A  A     LR  AT             ++L  L            GGA     L  +  + AE    LV L GGG  G D + S A S            XXXXXXXXX                 A  V  S   AG    AVCCRCRQA RLLARLVRGLPGETPAV+VRHSGLRS+VQILEDGAAEA A A     G G R+PAATEAAVREALELFVALSEQ PHR ALV  PGL  SASSYV                            SAE SAFRLL NLA +D+ RRR+ +LDGLVLA+ARAL                  XXXXXXXXXXXXXXXX XXXXXXXXXXXX     AAAALL RL+PVLG EGGEDELVAAGEALSAAVA                                         LASEAL  LLVLSW+DS SLD AAAVD F+TD+  AD VV+LWRR T  +   AS+ FG L  +AL  MSSI+ RPTGRQ+LVAAG ASAV+ VAL                                +L+V+ER E IRLLCVLCASPAHR AVRSSL+     E        +GG+D  EA      VEAAIVRIQG                                         A     FAA++LS+      RR P ++    XXXXXXXX                         G              +EDD AS  S +LEEALFPT AATA    A  G+P AR   S  P+L R    ++  A+A APA   R       PPAP     N RSDSEESLHRLLSMIA  +                           +E  +DK  C++CG+LVFAPTGFDLALI+CPHC   MG
Sbjct:  996 EVEAPRQEVCAGLRVLAGLAAHEACVPLVLESEDLGCLLQVIREAMTPTSAAGREASGGSGHRVRAEMREEVEDALRCLLSLTARPQ-----------QRSSLNRALGLVATSPAHPRLDALLNLASVEGGPALQ-------------------------------------GPADFPWQGGIGPAARD--SVVKAARARACDALRRACSEL-WPSSSPAPVAARDPGVPSGGGGSGGDSAEAGLGGNVTAGGGKLDVEA-VAEVFPLVFSLARTTLEGARCLRAMFAARGGVGEAAQAAVL--RGGVVGDGGGPGAGG----------------ITAIVAMLHSKHVEIRAAGASILRKLVFASAAPTHXXXXXXXXXXXXXXXXXSTR------PCRALLESLHACGGRSEALRSLCSVGLFG---------------------------EQDQAAVPSGTIAVIDNGXXXXXXERAGSRKGNAGCGR----RKGAAQEARWRGQLRDDAT-------------AVLVSLVGAVTGGAGNGSGGAPSWRQLRRRRSSGAEAADGLVGLSGGGEEGFDAQESEALSGVCVEALRALEEXXXXXXXXXIQRV-------------AVGVGGSVTTAG----AVCCRCRQATRLLARLVRGLPGETPAVVVRHSGLRSVVQILEDGAAEAKAAAG----GTGRRIPAATEAAVREALELFVALSEQQPHRGALVDLPGLARSASSYVVSATTASPASSSPRAGED---------SSAEESAFRLLANLAFADAPRRRVLELDGLVLASARALX-----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAALLCRLSPVLGAEGGEDELVAAGEALSAAVAAAAEGDVTDAATAVG--------------------------LASEALYALLVLSWADSRSLDVAAAVDGFVTDSRFADSVVSLWRRGTAPS---ASSGFGALSETALVTMSSIAARPTGRQSLVAAGVASAVVDVALGQQGGGDAAGDGEGGCSQTMMLAP--------QLSVSERGEIIRLLCVLCASPAHRGAVRSSLIAKRGLE--------SGGDDTEEAA-----VEAAIVRIQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----FAAEYLSS---GDHRRAPFRSPPTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--------------LEDDIAS--SVDLEEALFPTVAATA---VAHLGSPGARGV-SATPALSRAAVAVAPVASARAPAAGRRDHARLTFPPAP----KNGRSDSEESLHRLLSMIASEDNSS------AAVAVATANGSLRGAVVGAEERDDKIACESCGELVFAPTGFDLALIECPHCQMPMG 2167          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1701.4694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT64_ECTSI5.980e-22948.33E3 ubiquitin-protein ligase Nedd-4, putative n=1 T... [more]
A0A6H5KQZ1_9PHAE1.310e-16943.80FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 635..659
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 365..841

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1701contigL-elsbetiae_contig1701:8642..19053 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1701.4694.1mRNA_L-elsbetiae_contig1701.4694.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1701 8642..19053 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1701.4694.1 ID=prot_L-elsbetiae_contig1701.4694.1|Name=mRNA_L-elsbetiae_contig1701.4694.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1460bp
GTGTGAFSSAGGGGPGAELKPPPGETVAGAPAAAAAAAAPLRRELAGRRE
EVCAALRVLAGLAEHEACVSLVLEKEDLGFLLQVVREATTSPQNSNAGGG
GGGGGQVKAEMREEVEDALLCLLPLTARQQQQQQGSGSRSGSASLVNRAL
GLAATSPAHPGLDALLHLASAEGGTALQVVFQLVAAADAAKSVPSSPVLR
PLVDGRHAAVLERLLGPVPFAWQDERGSAKPKHASVVRAARARACDALRR
ACEEQAFSPASAAAAAAAAAAAAAAAARDEQQEGAAADGVRGGGGGGGSD
VGAIVAGLLPLVLSLAGTTVEGARCLRALFAAEGGVGEAARAAVLLPRDA
TRLEGGGGGGGGGERTAAAAAAAAAGGGIRAVVGLLESEQVEIRAAGASI
LRRLIFDPSPDQQPTTAAAAAGGGGGGYRDTLVATPAPSCRALLASLDAC
EGRWEAVRSLSSLGLFGGGAGGTDGDDDGSGGGRRGCNRGGFGGGGGGGG
GGGGGGGSWRHRRRGSGGGSTGGAFDAAGCVEGFDGRESEALSAVCVDAL
RALATDAFTGPLEKARCLSLLADLAVDPRCARTLFRGGAVPQMLLNAQGC
THAELVDLHGGGSGSDGRASPASSATASCESGARSRTATEDLEAEQEEDE
QQQQQQRHEAVPAEPVASSPAAAGRSSEAVCCRCRQAMRLLARLVRGLPG
ETPAVLVRHSGLRSIVQILEDGAAEAAALAAVPADGDGCRLPAATEAAVR
EALELFVALSEQGPHRRALVGTPGLLLSASSYVVSTTRSTAPPSSSSSSS
LPLAAAAAAADSAEASAFRLLGNLAHSDSARRRITKLDGLVLAAARALSA
SAQELGPSPSPSSSSSPPPVAGAAGAAGVAVARPPPSSFFSSSAAVGVGE
AAAALLGRLTPVLGVEGGEDELVAAGEALSAAVAAVSSATGGGSARAADA
DAAGNAAGNAGDAGDAGDGDGRLSELASEALSGLLVLSWSDSCSLDTAAA
VDSFITDAGLADGVVALWRRATTATTAAASADFGTLPASALALMSSISCR
PTGRQALVAAGAASAVIAVALRPSDTSVGGGGGSGVELLSSAGGGGDDES
GGLRLTVAERSEAIRLLCVLCASPAHRVAVRSSLVMATARERRGDGGDGA
GGEDEFEAELDEGDVEAAIVRIQGGNGGSMSGLQDCRAGACRLAFLLGVA
PPAAAPSRRLPHRSTAAGAGAFAADHLSAPVPVGGRRGPPQTPPAAANSA
ATSSAYPPHPAIPGAANRTNRGAFSERSGGGGGSSRGWAGEASRMEDDAA
SVDSQELEEALFPTTAATAGAPAAGSGAPQARPEGSGLPSLPRIPSVISA
AATAPAPARSWRPLPPAPAAAPSNARSDSEESLHRLLSMIAKAEGEEDSS
AAATGAGGSLYSGGGGGGGGDSEAGEDKTECKNCGKLVFAPTGFDLALID
CPHCGQSMG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold