prot_L-elsbetiae_contig1685.4602.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1685.4602.1
Unique Name	prot_L-elsbetiae_contig1685.4602.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	141

Homology

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BLAST of mRNA_L-elsbetiae_contig1685.4602.1 vs. uniprot
Match: D7G7V6_ECTSI (Acyl carrier protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V6_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 8.110e-70
Identity = 123/143 (86.01%), Postives = 129/143 (90.21%), Query Frame = 0

Query:    1 MQRVAAAALGRAVCLGARRVGSAT-RARSLQLHNSWQ-APSAA-RQFHFSRPVAAAAGESFLDKGDVTARILAVVKAFEKVDPTKVSDTALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            MQRVA AALGRA CL ARR GSA  R RSLQLHNSWQ AP+AA R FHFSRPVA AAG++FLDKGD TARI+AVVKAFEKVDPTKVS+ ALFKDDL+LDSLDAVEVVMAIEDEFTIEIPDSEADKI GIADAVAYIISHPAAK
Sbjct:    1 MQRVAVAALGRAACLTARRAGSAAARGRSLQLHNSWQQAPAAAVRHFHFSRPVAGAAGDTFLDKGDATARIIAVVKAFEKVDPTKVSENALFKDDLALDSLDAVEVVMAIEDEFTIEIPDSEADKIAGIADAVAYIISHPAAK 143

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BLAST of mRNA_L-elsbetiae_contig1685.4602.1 vs. uniprot
Match: A0A7S0UFZ0_9STRA (Acyl carrier protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFZ0_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.600e-31
Identity = 62/93 (66.67%), Postives = 72/93 (77.42%), Query Frame = 0

Query:   48 RPVAAAAGESFLDKGDVTARILAVVKAFEKVDPTKVSDTALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            +P+   A  +FLD G+V  RI  V+K F+KVD  KV+DTA F DDL LDSLDAVEVVMAIEDEF IEIPD+EADKI+ +ADAV YI SHP AK
Sbjct:   26 QPLRTFAASTFLDSGEVAGRITGVIKNFDKVDGNKVTDTAKFTDDLGLDSLDAVEVVMAIEDEFAIEIPDAEADKILSVADAVEYISSHPMAK 118

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BLAST of mRNA_L-elsbetiae_contig1685.4602.1 vs. uniprot
Match: A0A1E7ETX9_9STRA (Acyl carrier protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETX9_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.420e-30
Identity = 59/87 (67.82%), Postives = 71/87 (81.61%), Query Frame = 0

Query:   54 AGESFLDKGDVTARILAVVKAFEKVDPTKVSDTALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            A  +FLD G+V+ RI  VVK F+KVD  K+++TA F +DL LDSLDAVEVVMAIEDEF IEIPD+EADKI+ +ADAV YI+SHP AK
Sbjct:   35 AASTFLDAGEVSTRIQGVVKNFDKVDQNKITETAKFTEDLGLDSLDAVEVVMAIEDEFAIEIPDAEADKILSVADAVEYIVSHPMAK 121

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BLAST of mRNA_L-elsbetiae_contig1685.4602.1 vs. uniprot
Match: A0A7S1FKS7_9STRA (Acyl carrier protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FKS7_9STRA)

HSP 1 Score: 114 bits (286), Expect = 4.280e-30
Identity = 58/84 (69.05%), Postives = 72/84 (85.71%), Query Frame = 0

Query:   57 SFLDKGDVTARILAVVKAFEKVDPTKVSDTALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            SFLD  +V++R++ VVKAF+KVDP+KV+ T+ F DDL LDSLDAVEVVMAIEDEF IEIPD+EAD+I+ + DAVAYI +HP AK
Sbjct:   52 SFLDPSEVSSRVVEVVKAFDKVDPSKVAATSKFADDLGLDSLDAVEVVMAIEDEFAIEIPDAEADRILSVEDAVAYISAHPMAK 135

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BLAST of mRNA_L-elsbetiae_contig1685.4602.1 vs. uniprot
Match: A0A7S2SKU6_9STRA (Acyl carrier protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SKU6_9STRA)

HSP 1 Score: 113 bits (283), Expect = 8.610e-30
Identity = 60/88 (68.18%), Postives = 69/88 (78.41%), Query Frame = 0

Query:   53 AAGESFLDKGDVTARILAVVKAFEKVDPTKVSDTALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            AAG +FLD  +VT RI++VVK F+KVDP  V   + F+DDL LDSLD+VEVVMAIEDEF IEIPD+EADKI  IADAV YI  HP AK
Sbjct:   36 AAGSTFLDPSEVTDRIVSVVKNFDKVDPANVQPESKFEDDLGLDSLDSVEVVMAIEDEFAIEIPDAEADKIASIADAVEYIAGHPMAK 123

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BLAST of mRNA_L-elsbetiae_contig1685.4602.1 vs. uniprot
Match: A0A7S2RP75_9STRA (Acyl carrier protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RP75_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.370e-29
Identity = 64/101 (63.37%), Postives = 76/101 (75.25%), Query Frame = 0

Query:   40 AARQFHFSRPVAAAAGESFLDKGDVTARILAVVKAFEKVDPTKVSDTALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            AARQ  F   + A   ESFLDK +VT RI+ VV  FEKVD +KV+  A FKDDL LDSLDAVEVV+ IE+EF +EIPD+EADKI+ +ADAV YI +HP AK
Sbjct:   40 AARQLPFVA-IRAFGAESFLDKKEVTERIMMVVSNFEKVDTSKVNPEAKFKDDLDLDSLDAVEVVLGIEEEFALEIPDAEADKILSVADAVEYIANHPQAK 139

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BLAST of mRNA_L-elsbetiae_contig1685.4602.1 vs. uniprot
Match: A0A059LDR7_9CHLO (Acyl carrier protein n=2 Tax=unclassified Helicosporidium TaxID=2626013 RepID=A0A059LDR7_9CHLO)

HSP 1 Score: 113 bits (282), Expect = 1.450e-29
Identity = 55/87 (63.22%), Postives = 74/87 (85.06%), Query Frame = 0

Query:   54 AGESFLDKGDVTARILAVVKAFEKVDPTKVSDTALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            A  S+LDK DVT+R+LA+VK FEKVDP KV+++A F+ DL LDSLD VE+VMA+E+EF IEIPD+EADKI+ +++AV+Y+ S+P AK
Sbjct:   43 ADSSYLDKSDVTSRVLAIVKNFEKVDPAKVTESAAFQKDLGLDSLDTVELVMALEEEFAIEIPDAEADKILSVSEAVSYVASNPLAK 129

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BLAST of mRNA_L-elsbetiae_contig1685.4602.1 vs. uniprot
Match: A0A448YUF5_9STRA (Acyl carrier protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YUF5_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.310e-29
Identity = 58/87 (66.67%), Postives = 69/87 (79.31%), Query Frame = 0

Query:   54 AGESFLDKGDVTARILAVVKAFEKVDPTKVSDTALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            A  +FLD  +V+ R+  V+K F+KVD  KV+DT+ F DDL LDSLDAVEVVMAIEDEF IEIPD+EADKI+ +ADAV YI SHP AK
Sbjct:   35 AASTFLDPAEVSGRVTDVIKNFDKVDANKVTDTSKFTDDLGLDSLDAVEVVMAIEDEFAIEIPDAEADKILSVADAVEYISSHPMAK 121

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BLAST of mRNA_L-elsbetiae_contig1685.4602.1 vs. uniprot
Match: A0A7S2EA28_TRICV (Acyl carrier protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EA28_TRICV)

HSP 1 Score: 112 bits (280), Expect = 2.450e-29
Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = 0

Query:   47 SRPVAAAAGESFLDKGDVTARILAVVKAFEKVDPTKVSDTALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK 140
            ++PV   A  +FL   +VT RI++VVK F+KVDP KV+ T+ F +DL LDSLD+VEVVMAIEDEF IEIPD+EADKIV I DAV YI  HP AK
Sbjct:   30 AQPVRTFAASTFLSPNEVTERIVSVVKNFDKVDPGKVAPTSKFAEDLGLDSLDSVEVVMAIEDEFAIEIPDAEADKIVSIGDAVEYIAGHPMAK 123

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BLAST of mRNA_L-elsbetiae_contig1685.4602.1 vs. uniprot
Match: A0A835YPD9_9STRA (Acyl carrier protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPD9_9STRA)

HSP 1 Score: 113 bits (282), Expect = 2.650e-29
Identity = 63/102 (61.76%), Postives = 73/102 (71.57%), Query Frame = 0

Query:   40 AARQFHF----SRPVAAAAGESFLDKGDVTARILAVVKAFEKVDPTKVSDTALFKDDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHP 137
            A R FH+    S   A  A   FLDK +V  R++ VVK+FEK+DPTKVS TA FKDDL LDSLD+VEVVMAIEDEF I IPD EAD I+ + DAV +I SHP
Sbjct:   46 AVRSFHYTCRASDDAATPAKPVFLDKEEVLERVMTVVKSFEKIDPTKVSPTAKFKDDLGLDSLDSVEVVMAIEDEFAIVIPDDEADAILSVEDAVVFISSHP 147

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1685.4602.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1685.4602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7V6_ECTSI	8.110e-70	86.01	Acyl carrier protein n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A7S0UFZ0_9STRA	1.600e-31	66.67	Acyl carrier protein n=1 Tax=Pseudo-nitzschia deli...	[more]
A0A1E7ETX9_9STRA	1.420e-30	67.82	Acyl carrier protein n=1 Tax=Fragilariopsis cylind...	[more]
A0A7S1FKS7_9STRA	4.280e-30	69.05	Acyl carrier protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A7S2SKU6_9STRA	8.610e-30	68.18	Acyl carrier protein n=1 Tax=Eucampia antarctica T...	[more]
A0A7S2RP75_9STRA	1.370e-29	63.37	Acyl carrier protein n=1 Tax=Rhizochromulina marin...	[more]
A0A059LDR7_9CHLO	1.450e-29	63.22	Acyl carrier protein n=2 Tax=unclassified Helicosp...	[more]
A0A448YUF5_9STRA	2.310e-29	66.67	Acyl carrier protein n=2 Tax=Pseudo-nitzschia TaxI...	[more]
A0A7S2EA28_TRICV	2.450e-29	63.83	Acyl carrier protein n=1 Tax=Trieres chinensis Tax...	[more]
A0A835YPD9_9STRA	2.650e-29	61.76	Acyl carrier protein n=1 Tax=Tribonema minus TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 67..133 e-value: 3.7E-9 score: 36.8
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 62..137 score: 18.805
IPR036736	ACP-like superfamily	GENE3D	1.10.1200.10		coord: 51..139 e-value: 1.2E-24 score: 88.3
IPR036736	ACP-like superfamily	SUPERFAMILY	47336	ACP-like	coord: 61..136
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 64..135 e-value: 5.4E-21 score: 72.3
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 63..137 score: 16.048
None	No IPR available	PANTHER	PTHR20863:SF37		coord: 24..140
None	No IPR available	PANTHER	PTHR20863	ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED	coord: 24..140
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..140
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PRODOM	PD000887		coord: 101..136 e-value: 4.0E-7 score: 124.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1685	contig	L-elsbetiae_contig1685:20932..22814 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1685.4602.1	mRNA_L-elsbetiae_contig1685.4602.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1685 20932..22814 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1685.4602.1 ID=prot_L-elsbetiae_contig1685.4602.1|Name=mRNA_L-elsbetiae_contig1685.4602.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=141bp
MQRVAAAALGRAVCLGARRVGSATRARSLQLHNSWQAPSAARQFHFSRPV
AAAAGESFLDKGDVTARILAVVKAFEKVDPTKVSDTALFKDDLSLDSLDA
VEVVMAIEDEFTIEIPDSEADKIVGIADAVAYIISHPAAK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009081	PP-bd_ACP
IPR036736	ACP-like_sf
IPR003231	Acyl_carrier