prot_L-elsbetiae_contig16846.4596.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16846.4596.1
Unique Nameprot_L-elsbetiae_contig16846.4596.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length175
Homology
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BLAST of mRNA_L-elsbetiae_contig16846.4596.1 vs. uniprot
Match: D8LGF8_ECTSI (OSJNBa0029H02.30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF8_ECTSI)

HSP 1 Score: 307 bits (787), Expect = 4.930e-101
Identity = 154/176 (87.50%), Postives = 162/176 (92.05%), Query Frame = 0 
Query:    1 AYRRVLGAIGVVHFPSCEGGHADFKELEKQFNKVVAGYKHVSASATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEDGGSTTELHMAVSLYDVAVSIIKSLAADVKTWSASTSP-TAAGRAVAALRGINSSSPPLTSWYESEEGLSDSKNAKRRAGRLHKWIGDTCLLVGSPK 175
            AYRRVLGAIGVVHFPSCEGG ADFKELEKQFN+VVAGYKHV A  TRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFE GGSTTELHMAVSLYDVAVSIIK+LAAD+KTW +S SP +AAGRAVA LRG N ++PPLTSWYE EE LSDSKNAKRR GRLHKWIGDTCLL+GSPK
Sbjct:   96 AYRRVLGAIGVVHFPSCEGGRADFKELEKQFNQVVAGYKHVHA--TRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKNAKRRVGRLHKWIGDTCLLLGSPK 269
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BLAST of mRNA_L-elsbetiae_contig16846.4596.1 vs. uniprot
Match: A0A6H5J9H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H9_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 8.640e-95
Identity = 155/176 (88.07%), Postives = 163/176 (92.61%), Query Frame = 0 
Query:    1 AYRRVLGAIGVVHFPSCEGGHADFKELEKQFNKVVAGYKHVSASATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEDGGSTTELHMAVSLYDVAVSIIKSLAADVKTWSASTSP-TAAGRAVAALRGINSSSPPLTSWYESEEGLSDSKNAKRRAGRLHKWIGDTCLLVGSPK 175
            AYRRVLGAIGVVHFPSCEGGHADFKELEKQFN+VVAGYKHV A  TRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFE GGSTTELHMAVSLYDVAVSIIK+LAAD+KTW +S SP +AAGRAVA LRG N ++PPLTSWYE EE LSDSKNAKRR GRLHKWIGDTCLL+GSPK
Sbjct:   96 AYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHA--TRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKNAKRRVGRLHKWIGDTCLLLGSPK 269
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16846.4596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGF8_ECTSI4.930e-10187.50OSJNBa0029H02.30 n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5J9H9_9PHAE8.640e-9588.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013935TRAPP II complex, Trs120PANTHERPTHR21512TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9coord: 1..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16846contigL-elsbetiae_contig16846:114..2696 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16846.4596.1mRNA_L-elsbetiae_contig16846.4596.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16846 114..2696 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16846.4596.1 ID=prot_L-elsbetiae_contig16846.4596.1|Name=mRNA_L-elsbetiae_contig16846.4596.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=175bp
AYRRVLGAIGVVHFPSCEGGHADFKELEKQFNKVVAGYKHVSASATRMFA
FGHSFEQGDYPDILDPQRDIVFPPEQEFEDGGSTTELHMAVSLYDVAVSI
IKSLAADVKTWSASTSPTAAGRAVAALRGINSSSPPLTSWYESEEGLSDS
KNAKRRAGRLHKWIGDTCLLVGSPK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013935TRAPP_II_complex_Trs120