prot_L-elsbetiae_contig1682.4583.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1682.4583.1
Unique Nameprot_L-elsbetiae_contig1682.4583.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length487
Homology
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI)

HSP 1 Score: 682 bits (1761), Expect = 8.480e-241
Identity = 394/486 (81.07%), Postives = 424/486 (87.24%), Query Frame = 0
Query:    1 QDTLVAIRVTLPDKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGDDEESEXDADYAPDARGGSXXXXXXXXXXXXXXXDGARKXXXXXXXXXXXXXXXXKGXXXXXXXXXXXXXXXXXXKRAKKDKNAPKGAMTAFMQFSQAKRAEIKAENPDMKITEISKVLGEKWRGMDEDAKASFQRKAEADKARYQKEMVAYNAKKVAEAPEEAGSDEESE 486
            +DTLVAIRVTLP+KDEDTDE SPAESLQMAV+ERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEATITVNM+AEDLQ KYD NLNSEM+GPLHNLIAKIFKVLS KPVYVTGKFSS NGAKAVKCALGANEG+LYPLNKSFIFIHKPTCIIGFDEI+SVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET KPYVFSGIDRSEY+SLYSFLSTKKLRIKNIK+SGND AMLQLGDLDDHDPYKAALDDDQG+DEESEX            XXXXXXXXXXXXXXXD A K                + XXXXXXXXXXXXXXXXX   AKKDK+APKGAM+AFMQFSQA RA++K +NP++K+TEISKVLGEKW  +DE  K  +Q KA+ DKARY++E  AY++KK A  P +     +S+
Sbjct:  157 EDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEATITVNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKESGNDNAMLQLGDLDDHDPYKAALDDDQGEDEESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAHKTSKKRPGTGSAKKGPTQKXXXXXXXXXXXXXXXXX---AKKDKDAPKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKARYKRERDAYDSKKAATEPPQQSDSNDSD 639          
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A6H5L083_9PHAE (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L083_9PHAE)

HSP 1 Score: 549 bits (1415), Expect = 6.950e-191
Identity = 322/458 (70.31%), Postives = 338/458 (73.80%), Query Frame = 0
Query:    1 QDTLVAIRVTLPDKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAK----IFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGDDEESEXDADYAPDARGGSXXXXXXXXXXXXXXX-------------------------DGARKXXXXXXXXXXXXXXXXK------------GXXXXXXXXXXXXXXXXXXKRAKKDKNAPKGAMTAFMQFSQAKRAE 417
            +DTLVAIRVTLP+KDEDTDE SPAESLQMAV+ERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA ITVNM+AEDLQ KYD NLNSEM+GPLHNL+AK    IFKVLS KPVYVTGKFSS NGAKAVKCALGANEG+LYPLNK                             GAGVTRNFDLCVAPKSVAGET KPYVFSGIDRSEY+SLYSFLSTKKLRIKNIK+ GND AMLQLGDLDDHDPYKAALDDD+G+DEESE DADYAPDARGGS  XXXXXXXXXXXXX                         DGA K                +                               KR KKDK+APKGAM+AFMQFSQA RA+
Sbjct:   41 EDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEAAITVNMSAEDLQKKYDSNLNSEMIGPLHNLVAKVPKLIFKVLSSKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNK-----------------------------GAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKERGNDNAMLQLGDLDDHDPYKAALDDDEGEDEESEDDADYAPDARGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSDDGAHKTSKKKPGTGSAKKGATQKKVGCSPEPSSLNPCFPQRASGGHSSKPTPKKRTKKDKDAPKGAMSAFMQFSQANRAQ 469          
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA)

HSP 1 Score: 400 bits (1028), Expect = 2.500e-130
Identity = 287/506 (56.72%), Postives = 342/506 (67.59%), Query Frame = 0
Query:    1 QDTLVAIRVTLPDKDEDTD--------------EPSP---AESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAG-VTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGDDEESEXDADYAPDARGGSXXXXXXXXXXXXXXXDGARKXXXXXXXXXXXXXXXXKGXXXXXXXXXXXXXXXXXXKRAK-------------------KDKNAPKGAMTAFMQFSQAKRAEIKAENPDMKITEISKVLGEKWRGMDEDAKASFQRKAEADKARYQKEMVAYNA 469
            +D LV +R+ LPD+ ED D              +  P   AE+   AV++RANI DVKG VL E + S GTF  PRGRY++EMYS F+RMHGS+YDYKIQY DI+KLFLLEKPD+RYVAFV+SLDKP+RQGQQ+YQHLVL+ +K E T+ +NM+  +LQ KY G L   M G L NLIAKIFK LS + V+VTG + S  GAK VKCA+GA+EGHLYPLNKSFIFIHKPT +IGFDE++SVEFQRY G Q    V R+FDLCV  +S++GE +K Y FSGIDRSEY SLY +  TK LRIKNIK SG+  A      +D  D  +           E +      P+A G  XXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXX  + +                   KD NAPKGA +AFM FS   R ++  + P +KITE+SKVLGE+WRGM  + K  F+ KA ADKARY  EM  Y +
Sbjct:  101 KDCLVEMRLYLPDESEDDDGMEVDEDGEAIRKKDKKPRFTAETFHQAVMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDRYVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAGAKCVKCAMGASEGHLYPLNKSFIFIHKPTRVIGFDEVESVEFQRYSGTQDPSTVRRSFDLCVTLRSISGEPSKDYTFSGIDRSEYPSLYQWCQTKNLRIKNIKSSGDKVASALAEAMDSADVREEG---------EIKRVKSSEPEASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSKPEGGKRKAPAXXXXXXXXXXXKDPNAPKGAKSAFMYFSMETRGDVLKDQPGLKITEVSKVLGERWRGMTAEDKKQFEDKAAADKARYGTEMQEYKS 597          
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A7R9VM85_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VM85_9STRA)

HSP 1 Score: 328 bits (842), Expect = 1.810e-106
Identity = 166/293 (56.66%), Postives = 220/293 (75.09%), Query Frame = 0
Query:    2 DTLVAIRVTLP-DKDEDTDE---PSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAP-KSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSG 289
            D LVA+R  +P D D D  E   P+PAE  Q  +++ ANI    G V+VE  E +GTF  PRGRY++E+Y  F+RM G++YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD A +TVN+  E L+ +Y+G+L   M G L NL+AK FK+++KK V++ GKF++ N    VKCAL A+EGHLYPL K FIFIHKPT ++ FD+++SVEFQRY G QG+  TRNFDLCV+   S A    K Y+FSGIDRS+YT LY+FLS KK++IKN++  G
Sbjct:   21 DQLVAVRFYIPPDPDADPSEQDAPTPAELFQQRIMKNANIKRTTGDVIVEIPEEKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLLNSGADAGTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQGGG 311          
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA)

HSP 1 Score: 333 bits (855), Expect = 5.300e-105
Identity = 168/296 (56.76%), Postives = 220/296 (74.32%), Query Frame = 0
Query:    2 DTLVAIRVTLPDKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKA 293
            D LVAIR  +P   E    D D P+ AE     +++ A I +  G V+VEF+E++GTF  PRGRY +E+Y  F+RM G++YDYKI+Y+DI++LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LVL+TTK+ + +TVN+  ++L+ +Y G L   M G L NLIAK FK+++KK V++ GKF +      VKCAL ANEGHLYPL KSF+FIHKP  +I FDE+DSVEFQRY G QG+  TRNFDLCV   S AG+  K Y+FSGIDRS+YTSLY+FLS KK++IKNI++S  D A
Sbjct:  187 DQLVAIRFYIPPDPEMDPSDRDAPTSAEVFHQRIMKNAKIKNTAGDVIVEFDENKGTFLTPRGRYLIELYDSFLRMRGNKYDYKIKYDDIARLFLLPKPDDTHMAFVIALDKPIRQGQQRYQMLVLQTTKENSEVTVNLDEKELEEEYKGELQPVMQGALCNLIAKTFKIIAKKKVFIPGKFVNAYQQSCVKCALKANEGHLYPLEKSFVFIHKPPVLIRFDEVDSVEFQRYAGGQGS--TRNFDLCVMLASSAGDPQKEYIFSGIDRSDYTSLYNFLSGKKIKIKNIQESKIDTA 480          
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A7S4HR37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR37_9STRA)

HSP 1 Score: 342 bits (876), Expect = 1.460e-104
Identity = 224/492 (45.53%), Postives = 306/492 (62.20%), Query Frame = 0
Query:    2 DTLVAIRVTLP-DKDEDTDE---PSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQ---------------LGDLDD--HDPYKAALDDDQGDDEESEXDADYAPDARGGSXXXXXXXXXXXXXXXDGARKXXXXXXXXXXXXXXXXKGXXXXXXXXXXXXXXXXXXKRAKK---DKNAPKGAMTAFMQFSQAKRAEIKAENPDMKITEISKVLGEKWRGMDEDAKASFQRKAEADKARYQKEMVAYNA 469
            D LVAIR  +P D D D  E    +PAE  Q  +++ ANI    G V+VE  E++GTF  PRGRY++E+Y  F+RM G++YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD A +TVN+  E L+ +Y+G+L   M G L NL+AK FK+++KK V++ GKF++ N    VKCAL A+EGHLYPL K FIFIHKPT ++ FD+++SVEFQRY G QG+  TRNFDLCV+  +    + K Y+FSGIDRS+YT LY+FLS KK++IKN++ +  D A                   G++++   D      D++  + E    D D        S               D   K     XXXXXXX       XXXXXXXXXXXXXX      KK   D  APK   +A+  F  A R +IK +NPD    E+S + G+ W+ +  + K  +++ AE+D AR+++EM  Y+A
Sbjct:  189 DQLVAIRFYIPPDPDADPSELDASTPAELFQQRIMKNANIKRTTGDVIVEIPEAKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLINSGDSSTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQGNILDDAPSAPPVYNEDVIYGVPAGAGEMEESSEDESYGTNDEESVESESISGDDDDLGSGFDDSDLEEHRKAAKKSKPEDAKGKEKSNKXXXXXXXPEKEGSSXXXXXXXXXXXXXXDKVAPKKKXXXDPKAPKKGKSAYNYFLTAMRPKIKEQNPDATFGELSTLAGQAWKKVSNEEKEKYEKMAESDAARFKREMADYSA 678          
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A7S0TAB4_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TAB4_9STRA)

HSP 1 Score: 335 bits (858), Expect = 4.650e-103
Identity = 249/484 (51.45%), Postives = 325/484 (67.15%), Query Frame = 0
Query:    2 DTLVAIRVTLPDKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETA--KPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQ-SGNDKAMLQLGDLD------DHDPYKAALDDDQGDDEESEXDADYAPDARGGSXXXXXXXXXXXXXXXD-----GARKXXXXXXXXXXXXXXXXKGXXXXXXXXXXXXXXXXXXKRAKKDKNAPKGAMTAFMQFSQAKRAEIKAENPDMKITEISKVLGEKWRGMDEDAKASFQRKAEADKARYQKEMVAY 467
            D LV+IR  +P   E    D    S AE LQ  +++ ANI    G V+VEF+  +G+F  PRGRYS+E+Y  F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD   I VN+  + L+ +Y  +L   M G L NL+AK FKV++KK V++ GKFS+ N    VKCAL ANEG LYPL K F+FIHKP  +I F+E++SVEFQRY G QG+  TRNFDLCV+ K+ A   +  + YVFSG+DRS+YT LY+FLSTK +RIKN+++ +G  +    + D D      DH+  + + +D+  D+  + X            XXXXXXXXXXXXXX D     G + XXXXXXXXXXXXXXXX  XXXXXXXXXX    XXXX  AKKD N PK A +AFM FS A RA +K ENPD K  E++K+L  +++ + +D  A   +K E +K RY++EM  Y
Sbjct:  191 DQLVSIRFYIPPDPEVDPSDRTVKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEIRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKASAASVSNQQEYVFSGVDRSDYTGLYNFLSTKNIRIKNLQEIAGVQEKAAPVYDEDEIYGGPDHEMLEES-EDESYDEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLEEARGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGSXXXXXXAKKDPNKPKRAQSAFMIFSNANRARVKEENPDAKFGEMAKLLSAEYKNLSKDELAELDKKVEKEKKRYEREMENY 671          
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A6U3RIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RIK7_9STRA)

HSP 1 Score: 336 bits (861), Expect = 3.230e-102
Identity = 167/297 (56.23%), Postives = 227/297 (76.43%), Query Frame = 0
Query:    2 DTLVAIRVTLP---DKD-EDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET-AKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKA 293
            D LV +R+ +P   D D +D D  +PAE LQ  +++ ANI +  G V+VEF+ES+GTF  PRGRY++E+Y  F+RM G++YDYKI+Y+DISKLFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LV++TTK+++ ++VN+  E LQ++Y G+L   M G L NL+AK FKV++KK V++ GKF++ N    VKCAL ANEGHLYPL K F+FIHKP  ++ FDE++SVEFQRY G QG+  TRNFDLCV   + +G+T +K YVFSGIDRS+YT LY+FLS KK++I N +  G + A
Sbjct:  197 DQLVGVRIYIPPDPDMDPQDNDVQTPAEILQQRIMKMANIKNTTGSVIVEFDESRGTFLTPRGRYTIELYDSFLRMRGNKYDYKIKYDDISKLFLLPKPDDVHMAFVIALDKPIRQGQQRYQMLVMQTTKEQSEVSVNLDEETLQSEYGGDLQPMMYGALSNLVAKTFKVIAKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFVFIHKPPVLVRFDEVESVEFQRYAGGQGS--TRNFDLCVTLLNTSGDTGSKEYVFSGIDRSDYTGLYNFLSGKKIKINNFQGVGMEDA 491          
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: K0SUI2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUI2_THAOC)

HSP 1 Score: 332 bits (851), Expect = 1.080e-101
Identity = 240/489 (49.08%), Postives = 323/489 (66.05%), Query Frame = 0
Query:    2 DTLVAIRVTLP-DKDEDT---DEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETA--KPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGDDEESEXDADY---APDARGGSXXXXXXXXXXXXXXXDG-----ARKXXXXXXXXXXXXXXXXKGXXXXXXXXXXXXXXXXXXKRAK--------KDKNAPKGAMTAFMQFSQAKRAEIKAENPDMKITEISKVLGEKWRGMDEDAKASFQRKAEADKARYQKEMVAYN 468
            D LVA+R  +P D D D    D P+ AE+LQ  +++ A++    G ++ EF+E +GTF  PRGRYS+E+Y  F+R+ G++YDYKI+Y+DIS+LFLL + D+  VAFV++LDKPIRQGQQ+Y  LV++ TK+ + + +N+    L+ +Y G +   M G   NL+AK FKV+++K V++ GKF+++N    VKCAL ANEGHLYPL K FIFIHKP  +I FDEI+SVEFQRY G QG+  TRNFDLCV+  S  G++A  K Y FSGID+S Y +LYSFLS KK++IKN++  G +             P     D+   DDEES+ D+D+   AP +    XXXXXXX        D       +KXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXX   +        +D NAPK   +A++ F+ AKR+EIK  NPD    +ISK+LG+ ++ + +  K  +   A  DKARY++EM  Y+
Sbjct:  192 DQLVALRFYVPPDADADPTDKDAPTSAEALQSRIMQIASVKKTSGSIIAEFDEGKGTFLTPRGRYSIELYDSFLRLRGAKYDYKIKYDDISRLFLLPRQDDMTVAFVIALDKPIRQGQQRYNMLVMQCTKEHSELNINLDEATLEKEYGGQIEQHMNGSFSNLVAKTFKVITRKKVFIPGKFANSNQQACVKCALRANEGHLYPLEKQFIFIHKPAVLIRFDEIESVEFQRYAGGQGS--TRNFDLCVSLHSTPGDSASTKEYTFSGIDKSNYAALYSFLSGKKIKIKNLEGVGEEPKK----------PGAPRYDERMSDDEESD-DSDFDENAPKSDDSXXXXXXXXDLGSVVSDDSDLAEHRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSXXXXXXRDPNAPKAPKSAYVFFTSAKRSEIKEANPDAGFGDISKLLGKAYKELSDAEKEPYDEMARKDKARYKREMEDYD 667          
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Match: A0A7S2US25_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2US25_9STRA)

HSP 1 Score: 313 bits (803), Expect = 2.050e-101
Identity = 151/259 (58.30%), Postives = 202/259 (77.99%), Query Frame = 0
Query:   32 IERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETA--KPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQS 288
            +++ANI +  G V+VEF+E +GTF  PRGRY +E+Y  F+RM G++YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LV++TTK+ A +T+N+    L+ +Y+G+L   M G L NL+AK FKV++KK V++ GKF++ N    VKCAL ANEGHLYPL K FIFIHKP  +I FDE+DSVEFQRY G QG+  TRNFDLCV   +  G++   K Y+FSGIDRS+Y  LYSFLS KK+RIKN++ +
Sbjct:    1 MKKANIKNTTGDVIVEFDEEKGTFLTPRGRYMIELYDTFLRMRGNKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVMQTTKEHAEVTINLDEATLKKEYNGDLQPVMNGALSNLVAKTFKVIAKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFIFIHKPPVLIRFDEVDSVEFQRYAGGQGS--TRNFDLCVRLLNSVGDSGNTKEYIFSGIDRSDYAGLYSFLSGKKIRIKNLQSA 257          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1682.4583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF8_ECTSI8.480e-24181.07FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sili... [more]
A0A6H5L083_9PHAE6.950e-19170.31FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. ... [more]
A0A836C825_9STRA2.500e-13056.72FACT complex subunit SSRP1 n=1 Tax=Tribonema minus... [more]
A0A7R9VM85_9STRA1.810e-10656.66FACT complex subunit SSRP1 (Fragment) n=1 Tax=Pseu... [more]
A0A7S2SJ65_9STRA5.300e-10556.76FACT complex subunit SSRP1 (Fragment) n=1 Tax=Euca... [more]
A0A7S4HR37_9STRA1.460e-10445.53Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0TAB4_9STRA4.650e-10351.45FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschi... [more]
A0A6U3RIK7_9STRA3.230e-10256.23Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0SUI2_THAOC1.080e-10149.08Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2US25_9STRA2.050e-10158.30FACT complex subunit SSRP1 (Fragment) n=1 Tax=Atth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 450..470
NoneNo IPR availableGENE3D2.30.29.150coord: 35..175
e-value: 1.6E-48
score: 165.9
NoneNo IPR availablePANTHERPTHR45849:SF1FACT COMPLEX SUBUNIT SSRP1coord: 2..457
NoneNo IPR availablePANTHERPTHR45849FAMILY NOT NAMEDcoord: 2..457
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 54..284
IPR000969Structure-specific recognition proteinPRINTSPR00887SSRCOGNITIONcoord: 57..73
score: 44.12
coord: 102..118
score: 61.76
coord: 166..179
score: 35.71
coord: 211..228
score: 54.86
coord: 79..95
score: 52.21
coord: 193..211
score: 55.26
IPR013719Domain of unknown function DUF1747SMARTSM01287Rtt106_2coord: 185..285
e-value: 2.4E-32
score: 123.5
IPR013719Domain of unknown function DUF1747PFAMPF08512Rtt106coord: 187..284
e-value: 7.5E-23
score: 80.8
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 399..469
e-value: 3.6E-26
score: 103.0
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 400..468
e-value: 3.6E-23
score: 81.8
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 400..468
score: 19.388
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 176..283
e-value: 3.0E-33
score: 115.9
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 383..483
e-value: 1.9E-28
score: 100.6
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 387..468

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1682contigL-elsbetiae_contig1682:17842..24062 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1682.4583.1mRNA_L-elsbetiae_contig1682.4583.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1682 17842..24062 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1682.4583.1 ID=prot_L-elsbetiae_contig1682.4583.1|Name=mRNA_L-elsbetiae_contig1682.4583.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=487bp
QDTLVAIRVTLPDKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNE
SQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERY
VAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLN
SEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLY
PLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSV
AGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDL
DDHDPYKAALDDDQGDDEESEDDADYAPDARGGSDAESSSDSDKDEDSDD
GARKKSKKRSGSASGSTSAKKGASKKQRGSGGGSSKSPKKKRAKKDKNAP
KGAMTAFMQFSQAKRAEIKAENPDMKITEISKVLGEKWRGMDEDAKASFQ
RKAEADKARYQKEMVAYNAKKVAEAPEEAGSDEESE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000969SSrcognition
IPR013719DUF1747
IPR009071HMG_box_dom
IPR011993PH-like_dom_sf
IPR036910HMG_box_dom_sf