prot_L-elsbetiae_contig168.4569.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig168.4569.1
Unique Nameprot_L-elsbetiae_contig168.4569.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length72
Homology
BLAST of mRNA_L-elsbetiae_contig168.4569.1 vs. uniprot
Match: A0A6H5JYU8_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYU8_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 2.540e-29
Identity = 50/67 (74.63%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    5 QLELAVCHRAKDHKRWGRGLPVGRSMLHLLDQHDWEYEVLCDQFRTNWLKFQPRSGVSIVRIFSIQV 71
            +LELA+C R +DHKRW  G+PVG S LH+LDQHDWEYE LCDQFRT WLKFQP  GVSI RIFSIQ+
Sbjct:  289 ELELAICRRVEDHKRWDPGMPVGSSTLHMLDQHDWEYEALCDQFRTKWLKFQPPRGVSIERIFSIQI 355          
BLAST of mRNA_L-elsbetiae_contig168.4569.1 vs. uniprot
Match: D8LKU5_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU5_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 4.950e-16
Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 0
Query:    1 MAPTQLELAVCHRAK-DHKRWGRG-LPVGRSM--LHLLDQHDWEYEVLCDQFRTNWLKFQPRSGVSIVRIFSIQV 71
            M   +LEL++C R + D K WG+  + VG S   L +LD  DWEYE LCD F+T WLK QP +GVSIVRIFSIQV
Sbjct:  428 MTSARLELSICLRHEGDLKDWGQSEISVGSSSSTLRILDDDDWEYEALCDLFKTRWLKPQPTNGVSIVRIFSIQV 502          
BLAST of mRNA_L-elsbetiae_contig168.4569.1 vs. uniprot
Match: D7FXR2_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR2_ECTSI)

HSP 1 Score: 49.7 bits (117), Expect = 3.460e-5
Identity = 29/59 (49.15%), Postives = 37/59 (62.71%), Query Frame = 0
Query:   16 DHKRWGRG-LPVG--RSMLHLLDQHDWEYEVLCDQFRTNWLKFQPRSGVSIVRIFSIQV 71
            + +R  RG L VG   S L  L+ +  E + LCD F   W+K +P +GVSIVRIFSIQV
Sbjct:  196 EQRRTSRGVLSVGFSGSFLQRLEGNGAECKALCDLFNARWIKPRPENGVSIVRIFSIQV 254          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig168.4569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JYU8_9PHAE2.540e-2974.63PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LKU5_ECTSI4.950e-1657.33TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
D7FXR2_ECTSI3.460e-549.15PARP catalytic domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig168contigL-elsbetiae_contig168:12949..13633 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig168.4569.1mRNA_L-elsbetiae_contig168.4569.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig168 12876..13767 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig168.4569.1 ID=prot_L-elsbetiae_contig168.4569.1|Name=mRNA_L-elsbetiae_contig168.4569.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=72bp
MAPTQLELAVCHRAKDHKRWGRGLPVGRSMLHLLDQHDWEYEVLCDQFRT
NWLKFQPRSGVSIVRIFSIQV*
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