prot_L-elsbetiae_contig1679.4567.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1679.4567.1
Unique Nameprot_L-elsbetiae_contig1679.4567.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length116
Homology
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BLAST of mRNA_L-elsbetiae_contig1679.4567.1 vs. uniprot
Match: D8LHT5_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHT5_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 8.210e-26
Identity = 90/115 (78.26%), Postives = 95/115 (82.61%), Query Frame = 0 
Query:    1 MLKSRLTSVSLRGLVQVDGKAVAAMAVACSGSLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDGLGHLVDSSPNLKSLRLWGCTQVTDRFLKGHSREELAISRY 115
            MLKSRLT VSLRGL QVD KAV AMA ACSGSLR   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +DGLGHLVDS   L+SL LWGC QVTDRFL+GH++EEL ISRY
Sbjct:  656 MLKSRLTRVSLRGLAQVDDKAVEAMAAACSGSLRSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCRSATEDGLGHLVDSCDGLRSLCLWGCMQVTDRFLRGHTKEELVISRY 770
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BLAST of mRNA_L-elsbetiae_contig1679.4567.1 vs. uniprot
Match: R1FM25_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FM25_EMIHU)

HSP 1 Score: 57.4 bits (137), Expect = 5.010e-8
Identity = 22/40 (55.00%), Postives = 33/40 (82.50%), Query Frame = 0 
Query:   73 DDGLGHLVDSSPNLKSLRLWGCTQVTDRFLKGHSREELAI 112
            D+G+G LVD++P L+ L +WGC+Q+T+RF +GHSRE L +
Sbjct:   96 DNGVGALVDAAPRLQRLTVWGCSQLTNRFYEGHSREHLRV 135
[Close]
BLAST of mRNA_L-elsbetiae_contig1679.4567.1 vs. uniprot
Match: A0A7S3T5Y3_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T5Y3_EMIHU)

HSP 1 Score: 57.4 bits (137), Expect = 3.330e-7
Identity = 22/40 (55.00%), Postives = 33/40 (82.50%), Query Frame = 0 
Query:   73 DDGLGHLVDSSPNLKSLRLWGCTQVTDRFLKGHSREELAI 112
            D+G+G LVD++P L+ L +WGC+Q+T+RF +GHSRE L +
Sbjct:  518 DNGVGALVDAAPRLQRLTVWGCSQLTNRFYEGHSREHLRV 557
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BLAST of mRNA_L-elsbetiae_contig1679.4567.1 vs. uniprot
Match: A0A804LVT1_MAIZE (Uncharacterized protein n=4 Tax=Zea mays TaxID=4577 RepID=A0A804LVT1_MAIZE)

HSP 1 Score: 56.6 bits (135), Expect = 6.450e-7
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:   73 DDGLGHLVDSSPNLKSLRLWGCTQVTDRFLKGHSREELAI 112
            DD LG +VDS P+L+ L+L+GCTQVTD FLKGHS   + I
Sbjct:  809 DDSLGLIVDSCPSLRILKLFGCTQVTDLFLKGHSNTSVEI 848
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BLAST of mRNA_L-elsbetiae_contig1679.4567.1 vs. uniprot
Match: A0A317YFM8_MAIZE (Two-component response regulator ORR31 n=1 Tax=Zea mays TaxID=4577 RepID=A0A317YFM8_MAIZE)

HSP 1 Score: 56.6 bits (135), Expect = 6.560e-7
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:   73 DDGLGHLVDSSPNLKSLRLWGCTQVTDRFLKGHSREELAI 112
            DD LG +VDS P+L+ L+L+GCTQVTD FLKGHS   + I
Sbjct:  493 DDSLGLIVDSCPSLRILKLFGCTQVTDLFLKGHSNTSVEI 532
[Close]
BLAST of mRNA_L-elsbetiae_contig1679.4567.1 vs. uniprot
Match: D0MUG6_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MUG6_PHYIT)

HSP 1 Score: 55.1 bits (131), Expect = 2.110e-6
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0 
Query:   73 DDGLGHLVDSSPNLKSLRLWGCTQVTDRFLKGHSREELAIS 113
            +D LG L D + NL+SL LWGCTQVT RFL  HS++EL ++
Sbjct:  440 EDALGILADGTENLRSLVLWGCTQVTARFLTCHSQDELIVT 480
[Close]
BLAST of mRNA_L-elsbetiae_contig1679.4567.1 vs. uniprot
Match: K7UTY8_MAIZE (Uncharacterized protein n=3 Tax=Zea mays TaxID=4577 RepID=K7UTY8_MAIZE)

HSP 1 Score: 55.1 bits (131), Expect = 2.240e-6
Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:   73 DDGLGHLVDSSPNLKSLRLWGCTQVTDRFLKGHSREELAI 112
            D+ LG +VDS P+L+ L+L+GCTQVTD FLKGHS   + I
Sbjct:  850 DEALGLIVDSCPSLRILKLFGCTQVTDLFLKGHSNTSVKI 889
[Close]
BLAST of mRNA_L-elsbetiae_contig1679.4567.1 vs. uniprot
Match: A0A1B6PI41_SORBI (Uncharacterized protein n=3 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6PI41_SORBI)

HSP 1 Score: 55.1 bits (131), Expect = 2.240e-6
Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:   73 DDGLGHLVDSSPNLKSLRLWGCTQVTDRFLKGHSREELAI 112
            D+ LG +VDS P+L+ L+L+GCTQVTD FLKGHS   + I
Sbjct:  854 DEALGLIVDSCPSLRILKLFGCTQVTDLFLKGHSNTSVKI 893
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BLAST of mRNA_L-elsbetiae_contig1679.4567.1 vs. uniprot
Match: A0A0W8D419_PHYNI (Myb-related protein B n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D419_PHYNI)

HSP 1 Score: 55.1 bits (131), Expect = 2.260e-6
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0 
Query:   73 DDGLGHLVDSSPNLKSLRLWGCTQVTDRFLKGHSREELAIS 113
            +D LG L D + NL+SL LWGCTQVT RFL  HS+++L +S
Sbjct:  471 EDALGILADGTENLRSLVLWGCTQVTARFLTCHSQDDLIVS 511
[Close]
BLAST of mRNA_L-elsbetiae_contig1679.4567.1 vs. uniprot
Match: A0A5B6UMA7_9ROSI (F-box/LRR-repeat protein 4 n=1 Tax=Gossypium australe TaxID=47621 RepID=A0A5B6UMA7_9ROSI)

HSP 1 Score: 52.8 bits (125), Expect = 4.570e-6
Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:   73 DDGLGHLVDSSPNLKSLRLWGCTQVTDRFLKGHSREELAI 112
            D+ LG +VDS  +LK L+L+GCTQ+TD FLKGHS  ++ I
Sbjct:   41 DEALGLVVDSCSSLKLLKLFGCTQITDVFLKGHSNPQVQI 80
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1679.4567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHT5_ECTSI8.210e-2678.26Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
R1FM25_EMIHU5.010e-855.00Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A7S3T5Y3_EMIHU3.330e-755.00Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A804LVT1_MAIZE6.450e-762.50Uncharacterized protein n=4 Tax=Zea mays TaxID=457... [more]
A0A317YFM8_MAIZE6.560e-762.50Two-component response regulator ORR31 n=1 Tax=Zea... [more]
D0MUG6_PHYIT2.110e-658.54Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
K7UTY8_MAIZE2.240e-660.00Uncharacterized protein n=3 Tax=Zea mays TaxID=457... [more]
A0A1B6PI41_SORBI2.240e-660.00Uncharacterized protein n=3 Tax=Andropogoneae TaxI... [more]
A0A0W8D419_PHYNI2.260e-658.54Myb-related protein B n=1 Tax=Phytophthora nicotia... [more]
A0A5B6UMA7_9ROSI4.570e-657.50F-box/LRR-repeat protein 4 n=1 Tax=Gossypium austr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 30..55
e-value: 0.19
score: 20.8
coord: 3..28
e-value: 380.0
score: 2.2
coord: 57..82
e-value: 0.033
score: 23.4
coord: 83..113
e-value: 16.0
score: 13.0
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 57..79
e-value: 0.0011
score: 18.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..115
e-value: 4.4E-20
score: 73.9
NoneNo IPR availablePANTHERPTHR13318UNCHARACTERIZEDcoord: 38..113
NoneNo IPR availablePANTHERPTHR13318:SF116coord: 38..113
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 5..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1679contigL-elsbetiae_contig1679:13256..15172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1679.4567.1mRNA_L-elsbetiae_contig1679.4567.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1679 13231..15205 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1679.4567.1 ID=prot_L-elsbetiae_contig1679.4567.1|Name=mRNA_L-elsbetiae_contig1679.4567.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=116bp
MLKSRLTSVSLRGLVQVDGKAVAAMAVACSGSLRSLDLKGLALVTDITMV
ALARYCSSSLESLDLSFCRAVTDDGLGHLVDSSPNLKSLRLWGCTQVTDR
FLKGHSREELAISRY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf