prot_L-elsbetiae_contig16745.4553.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16745.4553.1
Unique Nameprot_L-elsbetiae_contig16745.4553.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length97
Homology
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: D7FYR5_ECTSI (RNase_PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR5_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 2.280e-49
Identity = 82/90 (91.11%), Postives = 86/90 (95.56%), Query Frame = 0
Query:    1 GIDLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEGGVFDDFEISSEIDDAVSIKGAANVPVCLTMSR 87
            G+DLDALGIVDGKFCWVVFVDIL   ADGNLLDASSFAAYTALNTARIPKVTPLVGEGG++DDFEISSEIDDAV+IKGA NVPVCLTMSR
Sbjct:  125 GLDLDALGIVDGKFCWVVFVDILVLQADGNLLDASSFAAYTALNTARIPKVTPLVGEGGIYDDFEISSEIDDAVAIKGATNVPVCLTMSR 214          
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: A0A6H5JQU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU5_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 1.830e-48
Identity = 82/91 (90.11%), Postives = 86/91 (94.51%), Query Frame = 0
Query:    1 GIDLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEGGVFDDFEISSEIDDAVSIKGAANVPVCLTMSRV 88
            G+DLDALGIVDGKFCWVVFVDIL   ADGNLLDASSFAAYTALNTARIPKVTPLVGEGG++DDFEISS IDDAV+IKGA NVPVCLTMSRV
Sbjct:  125 GLDLDALGIVDGKFCWVVFVDILVLQADGNLLDASSFAAYTALNTARIPKVTPLVGEGGIYDDFEISSNIDDAVAIKGATNVPVCLTMSRV 215          
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: A0A7S2Y3L9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3L9_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.730e-24
Identity = 53/90 (58.89%), Postives = 70/90 (77.78%), Query Frame = 0
Query:    3 DLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEGGVF-DDFEISSEIDDAVSIKGAANVPVCLTMSRV 88
            D  +L I+ G+FCWVV+VDIL   ADGN+LDA+SFAAY ALNTAR+PK+T + GE G   DDFE+SS++ D+V +  A +VPVC+T+S V
Sbjct:  122 DTHSLCIIPGRFCWVVYVDILVLRADGNVLDATSFAAYAALNTARVPKLTVVPGEAGASEDDFELSSDVADSVPLL-AQDVPVCITLSLV 210          
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: A0A835YWB1_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWB1_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 7.810e-21
Identity = 46/92 (50.00%), Postives = 65/92 (70.65%), Query Frame = 0
Query:    2 IDLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEG-GVFDDFEISSEIDDAVSIKGAANVPVCLTMSRVR 89
            +DL +L I+ G+FCW+V++D+L   ADGNLLDA+SFAAY A NTA +P+ T + GEG GV DDFEI  +++ A  + GA  V   L + +V+
Sbjct:  105 LDLKSLCIIPGRFCWIVYLDVLVLQADGNLLDAASFAAYVAFNTALVPRTTVISGEGAGVEDDFEIDGDLNTATRLPGADKVHEQLHLDQVQ 196          
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: R7T790_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7T790_CAPTE)

HSP 1 Score: 66.2 bits (160), Expect = 8.280e-11
Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = 0
Query:    2 IDLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEGGVFDDFEISSEIDDAVSIKGAANVPVCLTMSRVRLDGV 93
            +DL+AL I+ GK CW+++VD+L     GNL DA + A  +AL+  RIP VT  VGE G  +  E+S +  D   + G  NVP  +T++++ L  V
Sbjct:  115 LDLEALCIISGKQCWLLYVDVLILECGGNLFDAVALAVKSALHQTRIPLVTVSVGERGEAE-IELSDDPFDCKRV-GTDNVPCLVTLNKIGLAHV 207          
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: A0A0C9RSH6_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_15114_1182 transcribed RNA sequence n=3 Tax=Araucariaceae TaxID=25664 RepID=A0A0C9RSH6_9SPER)

HSP 1 Score: 59.7 bits (143), Expect = 2.030e-8
Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 0
Query:    1 GIDLDALGIVDGKFCWVVFVD---ILADGNLLDASSFAAYTALNTARIPKVTPLVGEG-GVFDDFEISSEIDDAVSIKGAANVPVCLTMSRV 88
            GIDL  L +V+GKFCW ++++   + +DGNLLDA   A   AL+   IPKV  + G      +D  IS   DD  S    + VPV +T+++V
Sbjct:  121 GIDLTNLKVVEGKFCWDLYIEGLVVSSDGNLLDALGIAIKAALSNTCIPKVEVVPGTSPDQQEDIGIS---DDEFSHLDTSRVPVIVTLTKV 209          
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: F6PLY6_CIOIN (Exosome complex component RRP42-like n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F6PLY6_CIOIN)

HSP 1 Score: 58.2 bits (139), Expect = 7.340e-8
Identity = 35/90 (38.89%), Postives = 49/90 (54.44%), Query Frame = 0
Query:    2 IDLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEGGVFDDFEISSEIDDAVSIKGAANVPVCLTMSRV 88
            IDL+ LGI+  K CWVV VD+L     GNLLDA S A   AL+   +P +    G+ G   +  +  + +D V      N PV +T+S+V
Sbjct:  119 IDLNTLGIIPHKQCWVVHVDVLILECGGNLLDAVSIAVKAALHNTGVPNIQVTDGDEGT-QEISLPDDPND-VKFINTVNAPVLVTISKV 206          
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: A0A7C2VK39_9ARCH (Exosome complex component Rrp42 n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7C2VK39_9ARCH)

HSP 1 Score: 54.3 bits (129), Expect = 1.680e-6
Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 0
Query:    2 IDLDALGIVDGKFCWVVFVD--ILAD-GNLLDASSFAAYTALNTARIPKVTPLVGEGGVFDDFEISSEIDDAVSIKGAANVPVCLTMSRV 88
            I+L+ L ++ G+  WV+FVD  IL D GNL DASS+AA  AL T +IP+V  + G+  V  D  +   ID+         VPV +T SRV
Sbjct:  118 INLEKLCVIPGEKVWVLFVDLYILDDNGNLFDASSYAAVAALLTTKIPEVE-VNGDNVVIRDERMLLPIDE---------VPVSITFSRV 197          
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: UPI001E1DF716 (exosome complex component RRP42-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF716)

HSP 1 Score: 53.9 bits (128), Expect = 2.430e-6
Identity = 32/90 (35.56%), Postives = 50/90 (55.56%), Query Frame = 0
Query:    2 IDLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEGGVFDDFEISSEIDDAVSIKGAANVPVCLTMSRV 88
            +DL  L +V+GK CWVV++D+L     GNL DA+S A   AL    IP +T    EG +  + E+S +  D   +    + P  +T+S++
Sbjct:  119 LDLKQLCVVEGKQCWVVYIDVLLLECGGNLFDAASIAVKAALFNTCIPTLTVTQDEGHI--ELELSDDPYDVQRLD-VMHAPCIVTLSKI 205          
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Match: T1EEF6_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EEF6_HELRO)

HSP 1 Score: 53.9 bits (128), Expect = 2.470e-6
Identity = 31/90 (34.44%), Postives = 51/90 (56.67%), Query Frame = 0
Query:    2 IDLDALGIVDGKFCWVVFVDIL---ADGNLLDASSFAAYTALNTARIPKVTPLVGEGGVFDDFEISSEIDDAVSIKGAANVPVCLTMSRV 88
            +D + LGI+ GK CWV++VD+L     GNL+DA S A   AL  ++IP +T +  E    +  E+S +  D   +   +  P  +T+++V
Sbjct:  119 LDYEKLGIIPGKKCWVLYVDVLILEVGGNLIDAISLAVKAALFNSKIPNLTVVTSELNEAE-IELSDDPYDCFRLD-VSRAPCIVTLNKV 206          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16745.4553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FYR5_ECTSI2.280e-4991.11RNase_PH domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JQU5_9PHAE1.830e-4890.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2Y3L9_9STRA2.730e-2458.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YWB1_9STRA7.810e-2150.00Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
R7T790_CAPTE8.280e-1141.05Uncharacterized protein n=1 Tax=Capitella teleta T... [more]
A0A0C9RSH6_9SPER2.030e-840.22TSA: Wollemia nobilis Ref_Wollemi_Transcript_15114... [more]
F6PLY6_CIOIN7.340e-838.89Exosome complex component RRP42-like n=1 Tax=Ciona... [more]
A0A7C2VK39_9ARCH1.680e-643.33Exosome complex component Rrp42 n=1 Tax=Candidatus... [more]
UPI001E1DF7162.430e-635.56exosome complex component RRP42-like n=1 Tax=Merce... [more]
T1EEF6_HELRO2.470e-634.44Uncharacterized protein n=1 Tax=Helobdella robusta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 1..91
e-value: 9.5E-16
score: 59.7
NoneNo IPR availablePANTHERPTHR11097EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEINcoord: 2..88
NoneNo IPR availablePANTHERPTHR11097:SF8EXOSOME COMPLEX COMPONENT RRP42coord: 2..88
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 2..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16745contigL-elsbetiae_contig16745:2241..3537 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16745.4553.1mRNA_L-elsbetiae_contig16745.4553.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16745 2241..3537 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16745.4553.1 ID=prot_L-elsbetiae_contig16745.4553.1|Name=mRNA_L-elsbetiae_contig16745.4553.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=97bp
GIDLDALGIVDGKFCWVVFVDILADGNLLDASSFAAYTALNTARIPKVTP
LVGEGGVFDDFEISSEIDDAVSIKGAANVPVCLTMSRVRLDGVRPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027408PNPase/RNase_PH_dom_sf
IPR020568Ribosomal_S5_D2-typ_fold