prot_L-elsbetiae_contig1671.4534.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1671.4534.1
Unique Nameprot_L-elsbetiae_contig1671.4534.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length119
Homology
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BLAST of mRNA_L-elsbetiae_contig1671.4534.1 vs. uniprot
Match: A0A6H5KBU9_9PHAE (MI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU9_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 2.540e-35
Identity = 79/120 (65.83%), Postives = 93/120 (77.50%), Query Frame = 0 
Query:    1 MPNGAFLTEEGALRAATKESKLRSELLRLCQAEFEK-DMYEDLKTQEENTDFSQMSKQEADALKAEFMDKIDVTKWRMQGYIHFFGELYNKNMLEENLVKTRVEILLNATKEVSADGTLK 119
            +P+ AF +EE AL  A K++ LRS+LL  CQAEFEK D+YEDLK QEE TDFS+MSKQ A+ALKAEF DK  +TK RM G I F GELY K+ML+EN++KT VE LLNA KEV AD TLK
Sbjct:  503 VPDQAFSSEEDALLTAAKKTNLRSQLLSFCQAEFEKEDIYEDLKQQEEKTDFSKMSKQAAEALKAEFHDKRFMTKRRMLGNIQFIGELYKKSMLKENVMKTCVEHLLNAKKEVGADRTLK 622
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BLAST of mRNA_L-elsbetiae_contig1671.4534.1 vs. uniprot
Match: D7G664_ECTSI (Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G664_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 6.690e-14
Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 0 
Query:   54 MSKQEADALKAEFMDKIDVTKWRMQGYIHFFGELYNKNMLEENLVKTRVEILLNATKEVSADGTLK 119
            MSKQ A+ALKAE  +K  +TK RM G I F GELY K+ML+EN++KT VE LLNA KEV+ D TLK
Sbjct:    1 MSKQAAEALKAELHEKRYITKRRMLGNIQFIGELYKKSMLKENVMKTCVEQLLNAKKEVATDRTLK 66
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1671.4534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBU9_9PHAE2.540e-3565.83MI domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7G664_ECTSI6.690e-1463.64Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016021MIF4G-like domain superfamilyGENE3D1.25.40.180coord: 6..118
e-value: 8.5E-15
score: 56.5
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 18..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1671contigL-elsbetiae_contig1671:1680..14375 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1671.4534.1mRNA_L-elsbetiae_contig1671.4534.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1671 1680..14375 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1671.4534.1 ID=prot_L-elsbetiae_contig1671.4534.1|Name=mRNA_L-elsbetiae_contig1671.4534.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp
MPNGAFLTEEGALRAATKESKLRSELLRLCQAEFEKDMYEDLKTQEENTD
FSQMSKQEADALKAEFMDKIDVTKWRMQGYIHFFGELYNKNMLEENLVKT
RVEILLNATKEVSADGTLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016021MIF4-like_sf
IPR016024ARM-type_fold