prot_L-elsbetiae_contig16665.4495.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16665.4495.1
Unique Nameprot_L-elsbetiae_contig16665.4495.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length247
Homology
BLAST of mRNA_L-elsbetiae_contig16665.4495.1 vs. uniprot
Match: D7FIL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIL7_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 6.100e-46
Identity = 123/282 (43.62%), Postives = 151/282 (53.55%), Query Frame = 0
Query:    1 LLHAFYKWSCQEFSEPVRPAPAQVVPDVTHLAAPVKTA-----------------------GVTAPYGGVAAAERLWAAQGGTAGGR-----TERVKMLWQKEQDELSA---RKQEQLRLXXXXXXXXLF--LLRQRHWHDPVDSLSYEGALQLY--LKERNLRAHEEADVSRAGVHSASWINETNRSLLITAAGDGVVRAWSGVLEAQTDLDGGAADEKMQPPVLVTGFQAVPDITPAVDGDVCMVTEWQQRRGLLSAAGSSPFVRVWDMASEQLWSQWEV 247
            +LH+FYKWSC+EFSEPV P PA VVPDV  LAAP K                         G  A +GG AAA  + +  GG+ G       +       Q E+D+ SA   RK+++L+             LL Q H H+PVDSLSYEG   L+     RN +           + S SWINET+ SLL+TAAGDGVVR W  V+EA        ADE   P  LVT F+A+PD+     G   + T WQQRRGLLSAAG+S  + VWDM SEQ+W QWEV
Sbjct:    1 MLHSFYKWSCREFSEPVTPPPAPVVPDVVDLAAPGKKXXXXXXXQQQGGAADFFAGLSPGRGPAAAWGGEAAAVGMMSV-GGSMGNPAMPPLSSSPYFAQQYEEDKQSAHEARKEQELQRQKRELQELRERQLLLQHHRHEPVDSLSYEGGHHLHGSFSNRNRKGTR--------MTSVSWINETDISLLLTAAGDGVVRVWGDVMEA-------GADEGRSPD-LVTAFRALPDLEQNPGGPG-LATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEV 264          
BLAST of mRNA_L-elsbetiae_contig16665.4495.1 vs. uniprot
Match: A0A6H5KBF0_9PHAE (Raptor_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF0_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 2.830e-40
Identity = 135/372 (36.29%), Postives = 161/372 (43.28%), Query Frame = 0
Query:    1 LLHAFYKWSCQEFSEPVRPAPAQVVPDVTHLAAPVKTA-----------------------GVTAPYGGVAAAERLWAAQGGTAGGRTERVK----MLWQKEQDELSARKQEQLRLXXXXXXXXLFL-----LRQRHWHDPVDSLSYEGALQLYLKERNLRAHEEADV-------------------------------------------------------------------------------------------SRAGVH--SASWINETNRSLLITAAGDGVVRAWSGVLEAQTDLDGGAADEKMQPPVLVTGFQAVPDITPAVDGDVCMVTEWQQRRGLLSAAGSSPFVRVWDMASEQLWSQWEV 247
            +LH+FYKWSC+EFSEPV P PA VVPDV  L AP K                         G  A +GG AAA  + +  GG        +        Q E+D+ SA ++ +   XXXXXXX   L     L Q H H+PVDSLSYEG   LY+K RN+R HEEAD                                                                                            +R G    S SWINET+ SLL+TAAGDGVVR W  V+EA        ADE   P  LVT F+A+PD+     G   + T WQQRRGLLSAAG+S  + VWDM SEQ+W QWEV
Sbjct: 1533 MLHSFYKWSCREFSEPVTPPPAPVVPDVVDLTAPAKKQHQHQQVQQQGGAADLFAGLSPGRGPPAAWGGEAAAVGMMSVGGGMWNPARPPLSSSPYFAQQYEEDKQSAHEERKXXXXXXXXXXLQELRERQLLLQHHRHEPVDSLSYEGGHHLYVKARNIRVHEEADALVKKFETLTGGEPAKVEYLSNRVRRADLKDEESERRLELPLKRVLVLGDKQSTRSLTFHPYEPFVVAASNEDGVSVFDFEEGVKHGSFSNRNRKGTRMTSVSWINETDNSLLLTAAGDGVVRVWGDVMEA-------GADEGRSPD-LVTAFRALPDLEQD-QGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEV 1895          
BLAST of mRNA_L-elsbetiae_contig16665.4495.1 vs. uniprot
Match: A0A7S3Q1Z5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1Z5_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.700e-11
Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query:  141 VHSASWINETNRSLLITAAGDGVVRAWSGVLEAQTDLDGGAADEKMQPPVLVTGFQAVPDITPAVDGDVCMVTEWQQRRGLLSAAGSSPFVRVWDMASEQL 241
            + S SWINE NR+ L++   DG VR W  VL   +      +D+    P L + F A+P++ P       ++ EWQQ  G L A G++ F+R WD+ SE+L
Sbjct: 1002 ITSMSWINERNRTKLLSGCDDGSVRIWDKVLTQCS------SDDDHAKPELASAFYALPELEPGNKRKSGLIAEWQQSEGRLIAGGATKFIRCWDLESEKL 1096          
BLAST of mRNA_L-elsbetiae_contig16665.4495.1 vs. uniprot
Match: A0A1Z5JAI2_FISSO (Regulatory associated protein of mTOR n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAI2_FISSO)

HSP 1 Score: 65.9 bits (159), Expect = 1.270e-8
Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 0
Query:  130 AHEEADVSRAGVHSASWINETN-RSLLITAAGDGVVRAWSGVLEAQTDLDGGAADEKMQPPVLVTGFQAVPDITPAVDGDVCMVTEWQQRRGLLSAAGSSPFVRVWDMASEQL 241
            ++E  D +R  + S  WINE + +S+++  + DG VR W G+++      G  +        LVT F A+P   P   G   +V EWQ  +G L  AGSS F+R WD+ SEQ+
Sbjct: 1290 SNENPDGTR--ITSCCWINEKSCKSMVLVGSDDGAVRLWGGMIDEIGRPTGTTS--------LVTAFSALPMSLPVNSGSG-LVCEWQSEKGRLITAGSSQFLRSWDVESEQI 1391          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16665.4495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FIL7_ECTSI6.100e-4643.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBF0_9PHAE2.830e-4036.29Raptor_N domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S3Q1Z5_9STRA1.700e-1137.62Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A1Z5JAI2_FISSO1.270e-836.28Regulatory associated protein of mTOR n=2 Tax=Fist... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 52..247
e-value: 2.0E-5
score: 25.9
IPR004083Regulatory associated protein of TORPANTHERPTHR12848Regulatory-associated protein of mTORcoord: 3..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16665contigL-elsbetiae_contig16665:639..3615 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16665.4495.1mRNA_L-elsbetiae_contig16665.4495.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16665 639..3615 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16665.4495.1 ID=prot_L-elsbetiae_contig16665.4495.1|Name=mRNA_L-elsbetiae_contig16665.4495.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=247bp
LLHAFYKWSCQEFSEPVRPAPAQVVPDVTHLAAPVKTAGVTAPYGGVAAA
ERLWAAQGGTAGGRTERVKMLWQKEQDELSARKQEQLRLQQQQQQQQLFL
LRQRHWHDPVDSLSYEGALQLYLKERNLRAHEEADVSRAGVHSASWINET
NRSLLITAAGDGVVRAWSGVLEAQTDLDGGAADEKMQPPVLVTGFQAVPD
ITPAVDGDVCMVTEWQQRRGLLSAAGSSPFVRVWDMASEQLWSQWEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR004083Raptor