prot_L-elsbetiae_contig16650.4487.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16650.4487.1
Unique Nameprot_L-elsbetiae_contig16650.4487.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length395
Homology
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: D7G0E9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0E9_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 3.150e-64
Identity = 117/133 (87.97%), Postives = 117/133 (87.97%), Query Frame = 0
Query:    2 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGDGDGAAPA------AQQTGPRP 128
            AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSATVEVRCALCGDTSHPTRDCLLHKSK   GQPGHEASLDKEYMSFMAELGDG            A QTGPRP
Sbjct:  594 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSATVEVRCALCGDTSHPTRDCLLHKSK-AQGQPGHEASLDKEYMSFMAELGDGXXXXXXXXXXXXAPQTGPRP 725          
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: A0A835ZI00_9STRA (Branchpoint-bridging protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI00_9STRA)

HSP 1 Score: 160 bits (404), Expect = 2.000e-40
Identity = 76/113 (67.26%), Postives = 89/113 (78.76%), Query Frame = 0
Query:    2 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSATVEVRCALCGDTSHPTRDCLLHKSKQG-SGQPGHEASLDKEYMSFMAELGD 113
            AA EV  LLRP+DD+ NEHKQKQLRELALINGTLR++++C+ICGEKGHRQ+ECPKRA      VEVRCA+CGDTSHPTRDC       G +  P   A+LD EY++FMAELGD
Sbjct:  427 AAAEVAGLLRPVDDDLNEHKQKQLRELALINGTLRDDEFCHICGEKGHRQYECPKRAAQSRPAVEVRCAICGDTSHPTRDCRQAPGGGGGAADPTKAAALDNEYLNFMAELGD 539          
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: K8Z468_NANGC (Branchpoint-bridging protein (Fragment) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z468_NANGC)

HSP 1 Score: 150 bits (378), Expect = 2.520e-36
Identity = 69/113 (61.06%), Postives = 87/113 (76.99%), Query Frame = 0
Query:    2 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGDG 114
            A++ V KLL P+DD  N  K +QLR+LALINGTLRE++YCN+CGEKGHRQFECP R  T+   V V+CA+CGDTSHPTRDC +    Q   Q G++  LD+EY++FMAELG+G
Sbjct:  376 ASEMVAKLLIPIDDAVNSQKMEQLRQLALINGTLREDEYCNLCGEKGHRQFECPTRHNTKVKMVNVKCAICGDTSHPTRDCRM--GGQAGAQSGNKEVLDQEYLNFMAELGEG 486          
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: W2LI46_PHYPR (Branchpoint-bridging protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LI46_PHYPR)

HSP 1 Score: 146 bits (369), Expect = 1.860e-35
Identity = 73/126 (57.94%), Postives = 88/126 (69.84%), Query Frame = 0
Query:    2 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRS-ATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGDGDGAAPAAQQTGP 126
            AAKEV  LL P+DD +N HKQKQLRELALINGTLR++DYC+ICGEKGHRQ+ECP R   R+   V V+CA+CGD+SHPTRDC   K           A++DKEY  FM +LG+    + AA   GP
Sbjct:  341 AAKEVQSLLVPVDDTRNAHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRTFKPVNVKCAICGDSSHPTRDCTQKKKSAEEN-----AAIDKEYQQFMQQLGEAPATSTAANGNGP 461          
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: W2RDP1_PHYPN (Branchpoint-bridging protein n=22 Tax=Phytophthora TaxID=4783 RepID=W2RDP1_PHYPN)

HSP 1 Score: 146 bits (369), Expect = 3.030e-35
Identity = 73/126 (57.94%), Postives = 88/126 (69.84%), Query Frame = 0
Query:    2 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRS-ATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGDGDGAAPAAQQTGP 126
            AAKEV  LL P+DD +N HKQKQLRELALINGTLR++DYC+ICGEKGHRQ+ECP R   R+   V V+CA+CGD+SHPTRDC   K           A++DKEY  FM +LG+    + AA   GP
Sbjct:  341 AAKEVQSLLVPVDDTRNAHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRTFKPVNVKCAICGDSSHPTRDCTQKKKSAEEN-----AAIDKEYQQFMQQLGEAPATSTAANGNGP 461          
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: A0A485K8Y1_9STRA (Branchpoint-bridging protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K8Y1_9STRA)

HSP 1 Score: 145 bits (367), Expect = 4.730e-35
Identity = 71/112 (63.39%), Postives = 88/112 (78.57%), Query Frame = 0
Query:    2 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGD 113
            AA EV +LL P+DD  N HKQKQLRELALINGTLR++DYC+ICGEKGHRQ+ECP R +T    VEVRC++CGDTSHPT DC    +++G  Q   +A +DKEY+SFM +LG+
Sbjct:  334 AAVEVARLLEPVDDTNNSHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNREKTFKP-VEVRCSICGDTSHPTSDC----TQKGDAQ--EKAIIDKEYLSFMEQLGE 438          
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: A0A6A4FT44_9STRA (Branchpoint-bridging protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FT44_9STRA)

HSP 1 Score: 145 bits (366), Expect = 8.310e-35
Identity = 71/113 (62.83%), Postives = 84/113 (74.34%), Query Frame = 0
Query:    2 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKR-AQTRSATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGD 113
            AAKEV  LL P+DD +N HKQKQLRELALINGTLR++DYC+ICGEKGHRQ+ECP R AQ     V V+CA+CGD+SHPTRDC   K           A++DKEY SFM +LG+
Sbjct:  347 AAKEVQSLLVPVDDTKNSHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAQRTFKAVNVKCAICGDSSHPTRDCTQKKKSAEEN-----AAIDKEYQSFMQQLGE 454          
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: D0N463_PHYIT (Branchpoint-bridging protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N463_PHYIT)

HSP 1 Score: 144 bits (363), Expect = 1.960e-34
Identity = 72/126 (57.14%), Postives = 86/126 (68.25%), Query Frame = 0
Query:    2 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKR-AQTRSATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGDGDGAAPAAQQTGP 126
            AAKEV  LL P+DD +N HKQKQLRELALINGTLR++DYC+ICGEKGHRQ+ECP R AQ     V V+CA+CGD+SHPTRDC   K           A++DKEY  FM +LG+    + A     P
Sbjct:  342 AAKEVQSLLVPVDDTRNAHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAQRTFKAVNVKCAICGDSSHPTRDCTQKKKSAEES-----AAIDKEYQQFMQQLGEAPATSTATNGKAP 462          
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: H3GZH0_PHYRM (Branchpoint-bridging protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZH0_PHYRM)

HSP 1 Score: 144 bits (363), Expect = 2.070e-34
Identity = 75/126 (59.52%), Postives = 91/126 (72.22%), Query Frame = 0
Query:    2 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRS-ATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGDGDGAAPAAQQTGP 126
            AAKEV  LL P+DD +N HKQKQLRELALINGTLR++DYC+ICGEKGHRQ+ECP R   R+   V V+CA+CGD+SHPTRDC   K K         A++DKEY SFM +LG+    APA ++  P
Sbjct:  328 AAKEVQSLLVPVDDTKNSHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRTFKAVNVKCAICGDSSHPTRDCT-QKGKSAE----ENAAIDKEYQSFMQQLGE----APAMKEKVP 444          
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: A0A7S2VGX7_9STRA (Branchpoint-bridging protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VGX7_9STRA)

HSP 1 Score: 144 bits (363), Expect = 4.660e-34
Identity = 71/130 (54.62%), Postives = 93/130 (71.54%), Query Frame = 0
Query:    2 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSAT----VEVRCALCGDTSHPTRDCLLHKSKQGSGQP--GHEASLDKEYMSFMAELGDGDGAAPAAQQTG 125
            AA+ +  +L  +DDE+N HKQ QLRELAL+NGTL++E++CN+CGEKGHR FECPKR    S+     ++++CA+CGDTSHPTRDC + KS  G G+     E  LD +Y +FMAEL DG  A PAA  +G
Sbjct:  395 AAEMIESMLVVIDDEKNVHKQNQLRELALLNGTLKDEEWCNLCGEKGHRNFECPKRFSAASSGAGSGLQIKCAICGDTSHPTRDCKMVKSDGGGGEDMVNKERQLDSDYSAFMAEL-DGKSAPPAAAASG 523          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0E9_ECTSI3.150e-6487.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZI00_9STRA2.000e-4067.26Branchpoint-bridging protein (Fragment) n=1 Tax=Tr... [more]
K8Z468_NANGC2.520e-3661.06Branchpoint-bridging protein (Fragment) n=2 Tax=Mo... [more]
W2LI46_PHYPR1.860e-3557.94Branchpoint-bridging protein n=6 Tax=Phytophthora ... [more]
W2RDP1_PHYPN3.030e-3557.94Branchpoint-bridging protein n=22 Tax=Phytophthora... [more]
A0A485K8Y1_9STRA4.730e-3563.39Branchpoint-bridging protein n=1 Tax=Aphanomyces s... [more]
A0A6A4FT44_9STRA8.310e-3562.83Branchpoint-bridging protein n=5 Tax=Phytophthora ... [more]
D0N463_PHYIT1.960e-3457.14Branchpoint-bridging protein n=2 Tax=Phytophthora ... [more]
H3GZH0_PHYRM2.070e-3459.52Branchpoint-bridging protein n=1 Tax=Phytophthora ... [more]
A0A7S2VGX7_9STRA4.660e-3454.62Branchpoint-bridging protein (Fragment) n=1 Tax=Sk... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 194..215
score: 30.91
coord: 259..276
score: 35.56
coord: 182..194
score: 38.46
coord: 118..130
score: 30.77
coord: 280..305
score: 39.23
NoneNo IPR availableGENE3D4.10.60.10coord: 40..98
e-value: 1.0E-7
score: 33.7
NoneNo IPR availablePANTHERPTHR11208RNA-BINDING PROTEIN RELATEDcoord: 1..149
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 40..56
e-value: 0.031
score: 20.5
coord: 68..84
e-value: 11.0
score: 4.9
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 41..56
score: 8.977
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 1..39
e-value: 5.8E-10
score: 41.5
IPR031150BBP/SF1 familyPANTHERPTHR11208:SF45SPLICING FACTOR 1coord: 1..149
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 37..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16650contigL-elsbetiae_contig16650:262..3181 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16650.4487.1mRNA_L-elsbetiae_contig16650.4487.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16650 262..3181 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16650.4487.1 ID=prot_L-elsbetiae_contig16650.4487.1|Name=mRNA_L-elsbetiae_contig16650.4487.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=395bp
QAAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHR
QFECPKRAQTRSATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASL
DKEYMSFMAELGDGDGAAPAAQQTGPRPPPSSSSGGGGGGGGGGGGGGGG
GGFVSAPSTSKGNHYVWTPPTAPAAAAPVAAAPPPAMAPPPAKPMNPPPV
VKHHVWTPPAFGQPPGGSSNGSGGGGHPGSGQQQQRSPFSSKAASGVSGG
HSSHADGAPLLPPSGAMLPPPPLPLPLPLPLPPPPPSLPVPPTPPSASVP
PSAPPASGPSSAPAPGTGAYSFAPPPLPTPPPSAPHGMYQQPPGLPPPPP
AVGAGYGGYPPAPPVPPPVPPPVPPAALWSGGAPPLPPSSGGPAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036612KH_dom_type_1_sf
IPR031150BBP/SF1
IPR036875Znf_CCHC_sf