mRNA_L-elsbetiae_contig16650.4487.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: D7G0E9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0E9_ECTSI) HSP 1 Score: 231 bits (590), Expect = 3.150e-64 Identity = 117/133 (87.97%), Postives = 117/133 (87.97%), Query Frame = 1 Query: 4 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGDGDGAAPA------AQQTGPRP 384 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSATVEVRCALCGDTSHPTRDCLLHKSK GQPGHEASLDKEYMSFMAELGDG A QTGPRP Sbjct: 594 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSATVEVRCALCGDTSHPTRDCLLHKSK-AQGQPGHEASLDKEYMSFMAELGDGXXXXXXXXXXXXAPQTGPRP 725
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: A0A835ZI00_9STRA (Branchpoint-bridging protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI00_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.000e-40 Identity = 76/113 (67.26%), Postives = 89/113 (78.76%), Query Frame = 1 Query: 4 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSATVEVRCALCGDTSHPTRDCLLHKSKQG-SGQPGHEASLDKEYMSFMAELGD 339 AA EV LLRP+DD+ NEHKQKQLRELALINGTLR++++C+ICGEKGHRQ+ECPKRA VEVRCA+CGDTSHPTRDC G + P A+LD EY++FMAELGD Sbjct: 427 AAAEVAGLLRPVDDDLNEHKQKQLRELALINGTLRDDEFCHICGEKGHRQYECPKRAAQSRPAVEVRCAICGDTSHPTRDCRQAPGGGGGAADPTKAAALDNEYLNFMAELGD 539
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: K8Z468_NANGC (Branchpoint-bridging protein (Fragment) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z468_NANGC) HSP 1 Score: 150 bits (378), Expect = 2.520e-36 Identity = 69/113 (61.06%), Postives = 87/113 (76.99%), Query Frame = 1 Query: 4 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGDG 342 A++ V KLL P+DD N K +QLR+LALINGTLRE++YCN+CGEKGHRQFECP R T+ V V+CA+CGDTSHPTRDC + Q Q G++ LD+EY++FMAELG+G Sbjct: 376 ASEMVAKLLIPIDDAVNSQKMEQLRQLALINGTLREDEYCNLCGEKGHRQFECPTRHNTKVKMVNVKCAICGDTSHPTRDCRM--GGQAGAQSGNKEVLDQEYLNFMAELGEG 486
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: W2LI46_PHYPR (Branchpoint-bridging protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LI46_PHYPR) HSP 1 Score: 146 bits (369), Expect = 1.860e-35 Identity = 73/126 (57.94%), Postives = 88/126 (69.84%), Query Frame = 1 Query: 4 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRS-ATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGDGDGAAPAAQQTGP 378 AAKEV LL P+DD +N HKQKQLRELALINGTLR++DYC+ICGEKGHRQ+ECP R R+ V V+CA+CGD+SHPTRDC K A++DKEY FM +LG+ + AA GP Sbjct: 341 AAKEVQSLLVPVDDTRNAHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRTFKPVNVKCAICGDSSHPTRDCTQKKKSAEEN-----AAIDKEYQQFMQQLGEAPATSTAANGNGP 461
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: W2RDP1_PHYPN (Branchpoint-bridging protein n=22 Tax=Phytophthora TaxID=4783 RepID=W2RDP1_PHYPN) HSP 1 Score: 146 bits (369), Expect = 3.030e-35 Identity = 73/126 (57.94%), Postives = 88/126 (69.84%), Query Frame = 1 Query: 4 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRS-ATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGDGDGAAPAAQQTGP 378 AAKEV LL P+DD +N HKQKQLRELALINGTLR++DYC+ICGEKGHRQ+ECP R R+ V V+CA+CGD+SHPTRDC K A++DKEY FM +LG+ + AA GP Sbjct: 341 AAKEVQSLLVPVDDTRNAHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRTFKPVNVKCAICGDSSHPTRDCTQKKKSAEEN-----AAIDKEYQQFMQQLGEAPATSTAANGNGP 461
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: A0A485K8Y1_9STRA (Branchpoint-bridging protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K8Y1_9STRA) HSP 1 Score: 145 bits (367), Expect = 4.730e-35 Identity = 71/112 (63.39%), Postives = 88/112 (78.57%), Query Frame = 1 Query: 4 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGD 339 AA EV +LL P+DD N HKQKQLRELALINGTLR++DYC+ICGEKGHRQ+ECP R +T VEVRC++CGDTSHPT DC +++G Q +A +DKEY+SFM +LG+ Sbjct: 334 AAVEVARLLEPVDDTNNSHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNREKTFKP-VEVRCSICGDTSHPTSDC----TQKGDAQ--EKAIIDKEYLSFMEQLGE 438
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: A0A6A4FT44_9STRA (Branchpoint-bridging protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FT44_9STRA) HSP 1 Score: 145 bits (366), Expect = 8.310e-35 Identity = 71/113 (62.83%), Postives = 84/113 (74.34%), Query Frame = 1 Query: 4 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKR-AQTRSATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGD 339 AAKEV LL P+DD +N HKQKQLRELALINGTLR++DYC+ICGEKGHRQ+ECP R AQ V V+CA+CGD+SHPTRDC K A++DKEY SFM +LG+ Sbjct: 347 AAKEVQSLLVPVDDTKNSHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAQRTFKAVNVKCAICGDSSHPTRDCTQKKKSAEEN-----AAIDKEYQSFMQQLGE 454
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: D0N463_PHYIT (Branchpoint-bridging protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N463_PHYIT) HSP 1 Score: 144 bits (363), Expect = 1.960e-34 Identity = 72/126 (57.14%), Postives = 86/126 (68.25%), Query Frame = 1 Query: 4 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKR-AQTRSATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGDGDGAAPAAQQTGP 378 AAKEV LL P+DD +N HKQKQLRELALINGTLR++DYC+ICGEKGHRQ+ECP R AQ V V+CA+CGD+SHPTRDC K A++DKEY FM +LG+ + A P Sbjct: 342 AAKEVQSLLVPVDDTRNAHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAQRTFKAVNVKCAICGDSSHPTRDCTQKKKSAEES-----AAIDKEYQQFMQQLGEAPATSTATNGKAP 462
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: H3GZH0_PHYRM (Branchpoint-bridging protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZH0_PHYRM) HSP 1 Score: 144 bits (363), Expect = 2.070e-34 Identity = 75/126 (59.52%), Postives = 91/126 (72.22%), Query Frame = 1 Query: 4 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRS-ATVEVRCALCGDTSHPTRDCLLHKSKQGSGQPGHEASLDKEYMSFMAELGDGDGAAPAAQQTGP 378 AAKEV LL P+DD +N HKQKQLRELALINGTLR++DYC+ICGEKGHRQ+ECP R R+ V V+CA+CGD+SHPTRDC K K A++DKEY SFM +LG+ APA ++ P Sbjct: 328 AAKEVQSLLVPVDDTKNSHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRTFKAVNVKCAICGDSSHPTRDCT-QKGKSAE----ENAAIDKEYQSFMQQLGE----APAMKEKVP 444
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Match: A0A7S2VGX7_9STRA (Branchpoint-bridging protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VGX7_9STRA) HSP 1 Score: 144 bits (363), Expect = 4.660e-34 Identity = 71/130 (54.62%), Postives = 93/130 (71.54%), Query Frame = 1 Query: 4 AAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSAT----VEVRCALCGDTSHPTRDCLLHKSKQGSGQP--GHEASLDKEYMSFMAELGDGDGAAPAAQQTG 375 AA+ + +L +DDE+N HKQ QLRELAL+NGTL++E++CN+CGEKGHR FECPKR S+ ++++CA+CGDTSHPTRDC + KS G G+ E LD +Y +FMAEL DG A PAA +G Sbjct: 395 AAEMIESMLVVIDDEKNVHKQNQLRELALLNGTLKDEEWCNLCGEKGHRNFECPKRFSAASSGAGSGLQIKCAICGDTSHPTRDCKMVKSDGGGGEDMVNKERQLDSDYSAFMAEL-DGKSAPPAAAASG 523 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16650.4487.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16650.4487.1 >prot_L-elsbetiae_contig16650.4487.1 ID=prot_L-elsbetiae_contig16650.4487.1|Name=mRNA_L-elsbetiae_contig16650.4487.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=395bp QAAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRback to top mRNA from alignment at L-elsbetiae_contig16650:262..3181- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16650.4487.1 ID=mRNA_L-elsbetiae_contig16650.4487.1|Name=mRNA_L-elsbetiae_contig16650.4487.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2920bp|location=Sequence derived from alignment at L-elsbetiae_contig16650:262..3181- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16650:262..3181- >mRNA_L-elsbetiae_contig16650.4487.1 ID=mRNA_L-elsbetiae_contig16650.4487.1|Name=mRNA_L-elsbetiae_contig16650.4487.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2370bp|location=Sequence derived from alignment at L-elsbetiae_contig16650:262..3181- (Laminarionema elsbetiae ELsaHSoW15)back to top |