prot_L-elsbetiae_contig16534.4428.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16534.4428.1
Unique Nameprot_L-elsbetiae_contig16534.4428.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length281
Homology
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BLAST of mRNA_L-elsbetiae_contig16534.4428.1 vs. uniprot
Match: A0A6H5L7B6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B6_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 9.300e-9
Identity = 48/137 (35.04%), Postives = 71/137 (51.82%), Query Frame = 0 
Query:   37 ATGHYFGSGRLMFDVPLGADIPLSQRYVQIGNGELLTATARGSLMMDFHQWDSEGQREDVRVLMRDVSVVEGLGPNLFSLHAVSVTHEITLDEYGTHVHGCITFPRNAAVASLYFTRVPQHAVSATLTAHSGFLPEF 173
            A+  +  S + MFD+    +IP       +G+G LL   A GS+ + F Q D  G +  + V + D+SVVE L  NLFS+HAVS+   I  DE G  +   + F +    ++ Y  R+P +  SAT+   S  LP F
Sbjct:  253 ASNSFTNSSQHMFDLQ---EIPAI-----VGDGRLLEVQAIGSINLSFFQEDENGGKTTMCVKLTDLSVVESLSFNLFSMHAVSLKQHILHDERGATLQNGLLFAKEEKASAAYVMRLP-YDPSATVV-DSAALPAF 379
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16534.4428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L7B6_9PHAE9.300e-935.04Integrase catalytic domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16534contigL-elsbetiae_contig16534:597..1439 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16534.4428.1mRNA_L-elsbetiae_contig16534.4428.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16534 597..1439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16534.4428.1 ID=prot_L-elsbetiae_contig16534.4428.1|Name=mRNA_L-elsbetiae_contig16534.4428.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=281bp
PDLSDGRVGSAFSVFPVGNADLCQPEGSEIVHSDSEATGHYFGSGRLMFD
VPLGADIPLSQRYVQIGNGELLTATARGSLMMDFHQWDSEGQREDVRVLM
RDVSVVEGLGPNLFSLHAVSVTHEITLDEYGTHVHGCITFPRNAAVASLY
FTRVPQHAVSATLTAHSGFLPEFPPPQPPHGGDPSDLPPPPFAGGGGGGG
GAPGLPFPPAAYPGVVTSRDYVPPTGIFSGSPAGVMYSELPTAGAAGVVP
RGIPLTPADFPGVVPPGVAHDFFALYGVSST
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