prot_L-elsbetiae_contig16527.4424.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16527.4424.1
Unique Nameprot_L-elsbetiae_contig16527.4424.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length101
Homology
BLAST of mRNA_L-elsbetiae_contig16527.4424.1 vs. uniprot
Match: A0A6H5JR21_9PHAE (Lipoyl-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JR21_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 9.120e-37
Identity = 64/90 (71.11%), Postives = 79/90 (87.78%), Query Frame = 0
Query:    1 MAGAFMAGANFVPPKKQAHKPMIKFLGKRSILREQQKDAEQQEIPGRHRHSPGALDFGQIVGGAMFGRPAMSEAEMEAVDSGGAESAPEL 90
            MA AFMAGA+FV P+K++HKP+IKF+GKR++L E++   E+  +P RHRHSPGALDF QIVGGAMFGRPAMSE EMEAVDSGGAE+AP++
Sbjct:  201 MAEAFMAGADFVAPRKKSHKPLIKFVGKRALLTEKKDKKEKDGLPARHRHSPGALDFSQIVGGAMFGRPAMSEEEMEAVDSGGAEAAPQV 290          
BLAST of mRNA_L-elsbetiae_contig16527.4424.1 vs. uniprot
Match: A0A835ZF23_9STRA (Single hybrid motif-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF23_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 6.630e-10
Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 0
Query:    4 AFMAGANFVPPKKQAHKPMIKFLGKRSILREQQKDAE---------------QQEIPGRH--RHSPGALDFGQIVGGAMFGRPAMSEAEMEAVDSGGAESAP 88
            A ++GA  +  + + H P+IKF+GKRS  +++  +A                +  + G    R  PGALDF QIVGGA+ GRPA+S+ EM+AV+SGGA  AP
Sbjct:  175 AHISGA-VLEEQPRRHVPLIKFVGKRSKEKQEAPEASPAXXXXXXXXXXXASKPALRGTSGVRVVPGALDFEQIVGGALVGRPALSQEEMDAVESGGASVAP 275          
BLAST of mRNA_L-elsbetiae_contig16527.4424.1 vs. uniprot
Match: A0A7S2WGR8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGR8_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.350e-8
Identity = 37/86 (43.02%), Postives = 46/86 (53.49%), Query Frame = 0
Query:   12 VPPKKQAHKPMIKFLGKRSILREQQKDAEQQE--------IPG-----RHRHSPGALDFGQIVGGAMFGRPAMSEAEMEAVDSGGA 84
            V P   A  P I FLGK    R +   A+  E        +P         H+PGA+D   + GGAMFGRP +SEAEMEAV++GGA
Sbjct:   29 VAPPSSARVPSICFLGKEGWARRKHGKADIVESRSSVAMPVPSSLLAEEINHTPGAVDQWTLAGGAMFGRPPISEAEMEAVETGGA 114          
BLAST of mRNA_L-elsbetiae_contig16527.4424.1 vs. uniprot
Match: A0A7S2WFW0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFW0_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 7.380e-8
Identity = 37/86 (43.02%), Postives = 46/86 (53.49%), Query Frame = 0
Query:   12 VPPKKQAHKPMIKFLGKRSILREQQKDAEQQE--------IPG-----RHRHSPGALDFGQIVGGAMFGRPAMSEAEMEAVDSGGA 84
            V P   A  P I FLGK    R +   A+  E        +P         H+PGA+D   + GGAMFGRP +SEAEMEAV++GGA
Sbjct:  136 VAPPSSARVPSICFLGKEGWARRKHGKADIVESRSSVAMPVPSSLLAEEINHTPGAVDQWTLAGGAMFGRPPISEAEMEAVETGGA 221          
BLAST of mRNA_L-elsbetiae_contig16527.4424.1 vs. uniprot
Match: A0A4D9D5P5_9STRA (Lipoyl-binding domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5P5_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 3.090e-6
Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 0
Query:   18 AHK-PMIKFLGKRSILREQQKDAE---------QQEIPGRH---RHSPGALDFGQIVGGAMFGRPAMSEAEMEAVDSGGA 84
            AH+ P+IKFLGKRS++R+Q   A+            +P RH   R +PG   F ++     FG P ++E EMEAV+SGGA
Sbjct:  122 AHRTPLIKFLGKRSLMRKQDSSAQXXXXXXXARSPSLPARHEDSRSTPGVKTFIELP--PRFGHPPVTEEEMEAVESGGA 199          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16527.4424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JR21_9PHAE9.120e-3771.11Lipoyl-binding domain-containing protein n=2 Tax=E... [more]
A0A835ZF23_9STRA6.630e-1041.18Single hybrid motif-containing protein n=1 Tax=Tri... [more]
A0A7S2WGR8_9STRA1.350e-843.02Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2WFW0_9STRA7.380e-843.02Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D5P5_9STRA3.090e-642.50Lipoyl-binding domain-containing protein n=1 Tax=N... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16527contigL-elsbetiae_contig16527:1890..3524 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16527.4424.1mRNA_L-elsbetiae_contig16527.4424.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16527 751..3672 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16527.4424.1 ID=prot_L-elsbetiae_contig16527.4424.1|Name=mRNA_L-elsbetiae_contig16527.4424.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=101bp
MAGAFMAGANFVPPKKQAHKPMIKFLGKRSILREQQKDAEQQEIPGRHRH
SPGALDFGQIVGGAMFGRPAMSEAEMEAVDSGGAESAPELRYIDGSRWAS
*
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