prot_L-elsbetiae_contig1652.4419.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1652.4419.1
Unique Nameprot_L-elsbetiae_contig1652.4419.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1422
Homology
BLAST of mRNA_L-elsbetiae_contig1652.4419.1 vs. uniprot
Match: D7FSX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX0_ECTSI)

HSP 1 Score: 448 bits (1153), Expect = 1.040e-133
Identity = 493/1090 (45.23%), Postives = 570/1090 (52.29%), Query Frame = 0
Query:    1 TGPDSGDVFQAGDVVRVEWEAPQDSSYFDVFLVNDGNPVDETFCDGGCLAPNGFLDVTLPAGLEAGNLYTFIVGDRVAEISSFGESEAFQILATGDGGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDADPDXXXXXXXXXXXXXXXXXXXGVFPIGVVIGSVAVGLGLAALFVVVVLACCRKGRGKDRSXXXXXXXXXXXXXXHRDDPGGAEIGASESGDVFASSASASD---ASVTALAEMGGLSPVQEEHAEVVTENPMISAIANGAQFHSSGXXXXXSARYNSNXXXXAIFNSGSGDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXGDEDEESGG---------MFADAGLVAALAAAAAHGVGKKGGMTIKRSGSGTPRWDGAWIRSPAWNRQKPA-APPVVGQQSPSPMAASKGEEQSAEGXXXXXXXXXXXXXXXXXXXXXXXAEDWMVSTTKSFSSRKNAEAAAFMEALRVDSITAVGEEELVRAGTRLASVHGAPTEEKQAEGSVAPGMRIGQPQSPLTLSPQSVDGITAKAFGQAEVIASKMPVVKGRGGVASEPECEVPAPAFGSGLLGAATRKQGDYSWFLSTSSGSIDRARPVSPSG--DSPPQASRAKTPAAGAAGAAAVDGRVQVGG------------------------TAGPARNTPPTP--VDSGSGSAART---AERREA-----EGEAVATAAGLRLPPKSQGVPARRALVTPRSGAAGRGGFSSTTPPSTATAKPCRIVAGTPTRGKRVSQVVEVFEGLTPKGKGSSTPGF---STPGRPKAAAQARSAALSTPGXXXXXXXXXXXXVKAAPTSPLTFESYSTRXXXXXXXXNDAPXXXXXXXGAADWSTLVARPARPTGAXXXXXXXXXXXXXXXXXXXXXPKEPATGAAANAA-PEELWRGEAAPGGETLSSEASGGWSTPFATPDRDQKTSAPDSERGGTTPECTTTTEQDASRRAVQTEKTGRAPSPTDEGQFAWQLESPAGVDGLPSPMGSSDPRVLALGKKRGRIIPAILGVSNTPVTDGAQALASSAADSKAPPHSVASSGDSSIGAGSAWEMEPSF 1037
            T P+SGDVF AGD V VEWEA  DSSYFD+ L+NDGNPV +  CDGGCLAPNGFL VTLP GLE+G+ Y+F+VGDRV E+SS+GESE F+I+A       XXXXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXX                 G+ A                   XXXXXXXXXX                  +GD+FASS   S    ASV+ LAE+G LSPV EE  EVVT NPMISA+ANGAQFHS+G            XXXX           XXXXXXXXXXXXXXX       XXXX G      G          MFADA +VA LAAAAA G  KK G+++KR GSG+ RWD   I+SPAW RQKPA AP ++GQQSP P+ A++ E++ AE                         EDWMVST  SFSSRK+AEAAAF+ A      +  GEE             G   EE +  G+  P    G  ++P   SPQSVDGI+AKAF QAEV+ SK+PVVK  G V SEPECEVP PA  +  LG A RKQ DYSW LS S  ++ ++ P+SPSG  DSPPQAS  +T   G           Q GG                        T    R  PP+   VD G   AA      +  EA     + E+ A AA LRLPPK+QG   RR   TP  GA+ RG   +TTP           +A +P RG RVS+VV+VFE LTPKG G  +  F   +TPGR +A                                                   D P        AA  S L   P    G                      P  PA   +  AA PE++ +G   PG      +A  GW+TP ATPDR  +   P+    G           DAS+      KT    SP DEGQFAWQLESPAGVDGLPSPMGSS    LA+GKK GRIIPAILG +NTPVT+ + A+  S AD KA  HSV SSGDSSIGAG  WEM  SF
Sbjct:   30 TSPESGDVFTAGDDVTVEWEASLDSSYFDITLLNDGNPVGDQLCDGGCLAPNGFLVVTLPDGLESGSAYSFLVGDRVEEVSSYGESETFEIVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---------------KGVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM-----------------NGDLFASSGRGSSNGGASVSGLAELGALSPVHEESTEVVTRNPMISAMANGAQFHSTGGGSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKFASLGXXXXNGGYGSARGXXXXXXXXXXMFADAEVVAELAAAAAKGADKKDGISVKRPGSGSGRWDRNGIKSPAWTRQKPAGAPTLIGQQSPGPVNAAEAEKKMAEAAVAGDPEPEAAAPAPL--------EDWMVSTRDSFSSRKSAEAAAFVAATEAGEGSVAGEEST-----------GEKVEEPEDVGAATP-RAPGAGEAPA-FSPQSVDGISAKAFEQAEVVTSKLPVVKRPGMVVSEPECEVPKPALSARRLGGA-RKQSDYSWLLSASPSNVGKSGPISPSGSGDSPPQASHGRTDVTGP----------QAGGNTPLKXXXPTXXXXXXXXXTVASVTPAKTRRGPPSAPTVDQGPDFAAAPKHGGDLGEAPCGPEQRESAAAAAALRLPPKAQGTTPRR---TPLRGAS-RGLNPATTP-----------MAKSP-RGPRVSKVVDVFEALTPKGVGGPSSSFGLSATPGRSRA---------------------------------------------------DPPTLGPDTPKAAGPSMLAPSPP---GIPNAGHALTTPKPPGTVKGVTNPSGPALKKSTRAAAPEDMSKG-GHPGXXXXXXDA--GWATPVATPDRALRDCTPEFTARG-----------DASKAG----KTSG--SPMDEGQFAWQLESPAGVDGLPSPMGSSGINALAVGKKGGRIIPAILGAANTPVTEVSPAVTPSTADIKAASHSVVSSGDSSIGAG--WEMGSSF 963          
BLAST of mRNA_L-elsbetiae_contig1652.4419.1 vs. uniprot
Match: A0A6H5JDW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDW9_9PHAE)

HSP 1 Score: 448 bits (1152), Expect = 2.020e-130
Identity = 636/1549 (41.06%), Postives = 749/1549 (48.35%), Query Frame = 0
Query:    1 TGPDSGDVFQAGDVVRVEWEAPQDSSYFDVFLVNDGNPVDETFCDGGCLAPNGFLDVTLPAGLEAGNLYTFIVGDRVAEISSFGESEAFQILATGDGGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDADPDXXXXXXXXXXXXXXXXXXXGVFPIGVVIGSVAVGLGLAALFVVVVLACCRKGRGKDRSXXXXXXXXXXXXXXHRDDPGGAEIGASESGDVFASSASASD---ASVTALAEMGGLSPVQEEHAEVVTENPMISAIANGAQFHSSGXXXXXSARYNSNXXXXAIFNSGSGDGSXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------GDEDEESG---------------GMFADAGLVAALAAAAAHGVGKKGGMTIKRSGSGTPRWDGAWIRSPAWNRQKPA-APPVVGQQSPSPMAASKGEEQSAEGXXXXXXXXXXXXXXXXXXXXXXXAEDWMVSTTKSFSSRKNAEAAAFMEALRVDSITAVGEEELVRAGTRLASVHGAPTEEKQAEGSVAPGMRIGQPQSPLTLSPQSVDGITAKAFGQAEVIASKMPVVKGRGGVASEPECEVPAPAFGSGLLGAATRKQGDYSWFLSTSSGSIDRARPVSP----------------------------SGDSP---------PQASRAKTPAAGAAGAAAVDGRVQVGGTAGPARNTPPTPVDSGS-GSAARTAERREAEGEAVATAAGLRLPPKSQGVPARRALVTPRSGAAGRGGFSSTTPPSTATAKPCRIVAGTPTRGKRVSQVVEVFEGLTPKGKGSSTPGF---STPGRPKAAAQARSAALSTPGXXXXXXXXXXXXVKAAPTSPLTFESYSTRXXXXXXXXNDAPXXXXXXXGAADWSTLVARPARPTGAXXXXXXXXXXXXXXXXXXXXXPKEPATGAAANAAPEELWRGEAAPGGETLSSEASGGWSTPF----ATPDRDQKTSAPDSERGGTTPECTTTTEQDASRRAVQTEKTGRAPSPTDEGQFAWQLESPAGVDGLPSPMGSSDPRVLALGKKRGRIIPAILGVSNTPVTDGAQALASSAADSKAPPHSVASSGDSSIGAGSAWEMEPSFGASQVAAFVA----------------------DAQAEAAAEAQAAVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGGAARSAPSRPTGDGTSTPEXXXXXXXXPATGVVAARAETQATEAAXXXXXXXXXXXXXXXAXEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TGAALQVAEAAAYVRKAEAG-----AAKNEDEDMGVV---VYCADAAWR--EVYNDAEADTSDXXXXXXXXXXXXXXXTSWSTAAVAVPAARGVDTADQVPAETAAAAGEHQHQEDSIWTSGLVANAMALADAAEHDAGGLYEGGDGGG--RRGV----GGERFHTVDTGIGDKEYASQRGGVRNVVTSGVFGTAKSAPAWNGGGDNDGDXXXXXXXXXEVQALVAEALALVMEANED 1420
            T P+SGDVF AGD V VEWEA  DSSYFD+ L+NDGNPV + FCDGGCLAPNGFL VTLP GL++G+ Y+F+VGDRV E+SS+GESE F+I+A     D                              E  A  D           XXXXXXXX                    +  +      R G      XXXXXXXXXXXXXX              +GD+FASS   S     SV+ LAE+G LSPV EE  EVVT NPMISA+ANGAQFHS+G            XXXX           XXXXXXXXXXXXXXXXXXXXXXXXXXX                        G      G               GMFADA +VA LA AAA G  KK G+++KR GSG+ RWDG WI+SP+WNRQKPA AP ++GQQSP P+ A++ E++ AE        XXXXXXXXXXXXXXX  EDWMVST  SFSSRK+AEAAAF  A R D+ +A GEE +           G   EE +  G+  PG            SPQSVDGI+AKAF QAEV+ SK+PVVK  G V SEPECEVP PA  +  LG A RKQ DYSW LS S  ++ ++ P+S                             +G  P         P  +R   P+A                TA  A +    P   G  G      E+RE+     A AA LRLPPK+QG   RR   TP  GA+ RG   +TTP           +A +P RG RVSQVV+VFEGLTPKG G  +  F   +TPGR    ++AR   L   G              + P  P    + +T            P       GAA W+T VA P R +                          P   +A  AAPE++ +G   PG        +G          A  DR              TPE T     DAS+      KT    SP DEGQFAWQLESPAGVDGLPSPMGS+    LA+GKK GRIIPAILG +NTPVT+ + A+  S  D K   HSV SSGDSSIGAG  WEM  SFG+S+VAAFVA                      D QA  A  A+AA +       XXXXXXXXXXXXXX                  R+ PS        T E        P         + QA+EAA XXXXXXXXXXXXXX X   XXXXXXXXXXXXXXXXXXXXXXXXX             T + L+V +  A V  AEA      A     E  G +   V+  +A  +  EVYNDA  D SD                +W  AA  +P      +  +V A T  AAG  +  +D +   G  A     ++     +G    G D G   R GV    GGE      T     EYAS RG   +  TSGVF +A+S   W    D++ +         EVQALVAEALALV EAN D
Sbjct:   30 TSPESGDVFTAGDDVTVEWEASLDSSYFDITLLNDGNPVGDQFCDGGCLAPNGFLVVTLPDGLQSGDAYSFLVGDRVEEVSSYGESETFEIVAAAISSDTAAEDDGDT---------------------EVAAAADTGDGESFNWIIXXXXXXXXXXXXXXXXXXXXXXXXXXDRVKDIEAATVARSGTSDAAHXXXXXXXXXXXXXXXX-----------MNGDLFASSGRGSSIGGTSVSRLAELGALSPVHEESTEVVTRNPMISAMANGAQFHSTGSGSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKFASLGRGSSNGGYGSARGXXXXXXXXXGMFADAEVVAELAVAAAKGADKKEGISVKRPGSGSGRWDGNWIKSPSWNRQKPASAPTLIGQQSPGPVNAAEAEKKMAE--------XXXXXXXXXXXXXXXPLEDWMVSTQDSFSSRKSAEAAAFAAAARADAGSATGEESM-----------GEKVEEPEDVGAATPGAG-----EATAFSPQSVDGISAKAFEQAEVVTSKLPVVKRPGMVVSEPECEVPKPALSARRLGGA-RKQSDYSWLLSASPSNVGKSSPISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGRPTIVTVASVTPAKTRQVPPSAP---------------TADQAPDFAAAPKHGGDLGEPPCGPEQRES----AAAAAALRLPPKAQGTTPRR---TPLRGAS-RGLNPATTP-----------MAKSP-RGPRVSQVVDVFEGLTPKGVGGPSSSFGLGATPGR----SRARPPTL---GADTPKAAGPPMLAPSPPGIPNAGHALTTPKPRGAVKGVATPSGPALKVGAATWATPVATPDRGSFGTTI---------------------PTKQSARAAAPEDMSKG-GHPGXXXXXXGDAGXXXXXXXXXXAVRDR--------------TPEFTA--RGDASKAG----KTSG--SPMDEGQFAWQLESPAGVDGLPSPMGSNGINALAVGKKGGRIIPAILGAANTPVTEVSPAVTPSTTDIKVASHSVVSSGDSSIGAG--WEMGSSFGSSRVAAFVAXXXXXXXXXXXXXXXXXXXXXVDEQAMEAELARAAAMVGQRTTAXXXXXXXXXXXXXXAHQ---------------RNGPSHTN----PTAEMVSYQSDRPTD------RQAQASEAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRDAGAATATASGTPSVLEVNQGRAGVGLAEAVSPNVVATPETTEGGGAMDDTVFINEAVGKHPEVYNDA--DNSDESIIDVGEEVDMREEKNWMAAASPMPRMPNAASIGEVFAMTPTAAGHEEPVQDFVGEGGTTAVEQEHSENFGSFSGESSSGADTGALHRYGVYDLAGGEAAAATGT----NEYASSRGSGGDAATSGVFRSARSILTWKE--DDEQEEGDAEREAEEVQALVAEALALVQEANAD 1400          
BLAST of mRNA_L-elsbetiae_contig1652.4419.1 vs. uniprot
Match: D7FSW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW9_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.160e-6
Identity = 63/195 (32.31%), Postives = 79/195 (40.51%), Query Frame = 0
Query: 1240 EVYNDAEADTSDXXXXXXXXXXXXXXXTSWSTAAVAVPAARGVDTADQVPAETAAAAGEHQHQEDSIWTSGLVA----------NAMALADAAEHDAGGLYEGGDGGGRRGV----GGERFHTVDTGIGDKEYASQRGGVRNVVTSGVFGTAKSAPAWNGGGDNDGDXXXXXXXXXEVQALVAEALALVMEANED 1420
            EVYNDA  D SD                 W  AA   P      +  +V A T  AAG  +  +D +   G  A           + +   ++  D G L+       R GV    GGE      T     EYAS RG   +  T GVF +A+S   W    D++ +         EVQALVAEALALV EAN D
Sbjct:   16 EVYNDA--DNSDESIIDVGEEADMGGGKDWMAAASPTPRTPNAASIGEVFAMTPMAAGHEEPMQDFVGEGGTAAVEQEHSEESFGSFSGESSSGADTGALH-------RYGVYDLAGGEAAAATGT----NEYASSRGSGGDAATPGVFRSARSILTWKE--DDEQEEGDAEREAEEVQALVAEALALVQEANAD 195          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1652.4419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FSX0_ECTSI1.040e-13345.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDW9_9PHAE2.020e-13041.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSW9_ECTSI1.160e-632.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1153..1187
NoneNo IPR availableCOILSCoilCoilcoord: 1047..1095
NoneNo IPR availableCOILSCoilCoilcoord: 1400..1420
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..185
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..156
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 186..1421
NoneNo IPR availableTMHMMTMhelixcoord: 160..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1652contigL-elsbetiae_contig1652:1286..8925 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1652.4419.1mRNA_L-elsbetiae_contig1652.4419.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1652 1286..8925 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1652.4419.1 ID=prot_L-elsbetiae_contig1652.4419.1|Name=mRNA_L-elsbetiae_contig1652.4419.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1422bp
TGPDSGDVFQAGDVVRVEWEAPQDSSYFDVFLVNDGNPVDETFCDGGCLA
PNGFLDVTLPAGLEAGNLYTFIVGDRVAEISSFGESEAFQILATGDGGDA
DGGGDVADGDAGDGDAGDGDAGDGDAGGGETDADPDGGTGEGDVTEDAAD
SGDDGGVFPIGVVIGSVAVGLGLAALFVVVVLACCRKGRGKDRSSENAGG
GGSAQGGGHRDDPGGAEIGASESGDVFASSASASDASVTALAEMGGLSPV
QEEHAEVVTENPMISAIANGAQFHSSGGGGGGSARYNSNGGGSAIFNSGS
GDGSGGDGGSSKFQSVGGGSSNEGEGSVRGPGDEDEESGGMFADAGLVAA
LAAAAAHGVGKKGGMTIKRSGSGTPRWDGAWIRSPAWNRQKPAAPPVVGQ
QSPSPMAASKGEEQSAEGAGDGDLEPKAAAPAPTPTPTPTPAEDWMVSTT
KSFSSRKNAEAAAFMEALRVDSITAVGEEELVRAGTRLASVHGAPTEEKQ
AEGSVAPGMRIGQPQSPLTLSPQSVDGITAKAFGQAEVIASKMPVVKGRG
GVASEPECEVPAPAFGSGLLGAATRKQGDYSWFLSTSSGSIDRARPVSPS
GDSPPQASRAKTPAAGAAGAAAVDGRVQVGGTAGPARNTPPTPVDSGSGS
AARTAERREAEGEAVATAAGLRLPPKSQGVPARRALVTPRSGAAGRGGFS
STTPPSTATAKPCRIVAGTPTRGKRVSQVVEVFEGLTPKGKGSSTPGFST
PGRPKAAAQARSAALSTPGAAAAAAARALDSVKAAPTSPLTFESYSTRAP
FTPGTGNDAPTPGALTPGAADWSTLVARPARPTGAAAAAAAAAADPAKDA
AAKEEKPKEPATGAAANAAPEELWRGEAAPGGETLSSEASGGWSTPFATP
DRDQKTSAPDSERGGTTPECTTTTEQDASRRAVQTEKTGRAPSPTDEGQF
AWQLESPAGVDGLPSPMGSSDPRVLALGKKRGRIIPAILGVSNTPVTDGA
QALASSAADSKAPPHSVASSGDSSIGAGSAWEMEPSFGASQVAAFVADAQ
AEAAAEAQAAVVEAQAQAAVVEAQAEAAEEEAAEQRARAEGGAEKAKGGA
ARSAPSRPTGDGTSTPEPAPAAALAPATGVVAARAETQATEAAAAATAAA
TAAAEADAAAEDAAAEAREAEMESEKAAEEAATAKAAKHRDAEKSTEATG
AALQVAEAAAYVRKAEAGAAKNEDEDMGVVVYCADAAWREVYNDAEADTS
DTDTDAEEEIDVGEEETSWSTAAVAVPAARGVDTADQVPAETAAAAGEHQ
HQEDSIWTSGLVANAMALADAAEHDAGGLYEGGDGGGRRGVGGERFHTVD
TGIGDKEYASQRGGVRNVVTSGVFGTAKSAPAWNGGGDNDGDGGDAEREA
EEVQALVAEALALVMEANEDT*
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