prot_L-elsbetiae_contig16506.4414.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16506.4414.1
Unique Nameprot_L-elsbetiae_contig16506.4414.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length56
Homology
BLAST of mRNA_L-elsbetiae_contig16506.4414.1 vs. uniprot
Match: A0A6H5JLR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLR5_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 1.040e-29
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0
Query:    2 CKPCEKEFTSESARQAHLQSHVPCPEKGCGFSALRKFVNNHHEAKHGQLSGSGFQ 56
            C+PCEKEFT+E+ARQAHLQSHVPCPEKGCGFSALRK VNNHHEAKHGQLSGSGFQ
Sbjct:   59 CEPCEKEFTTETARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQLSGSGFQ 113          
BLAST of mRNA_L-elsbetiae_contig16506.4414.1 vs. uniprot
Match: D7FK97_ECTSI (Zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK97_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 3.940e-29
Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    2 CKPCEKEFTSESARQAHLQSHVPCPEKGCGFSALRKFVNNHHEAKHGQLSGSGFQ 56
            C+PCEKEFT+E+ARQAHLQSHVPCPEKGCGFSALRK VNNHHEAKHGQ SGSGFQ
Sbjct:   76 CEPCEKEFTTEAARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQFSGSGFQ 130          
BLAST of mRNA_L-elsbetiae_contig16506.4414.1 vs. uniprot
Match: A0A7S2RYE8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYE8_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.940e-16
Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    1 HCKPCEKEFTSESARQAHLQSHVPCPEKGCGFSALRKFVNNHHEAKHGQLSGSGFQ 56
            +C+ C+KEF+S SAR AHL+SH PCP  GC F+A +K VN H E  HGQ SG+G++
Sbjct:   59 YCEACDKEFSSASARDAHLRSHTPCPHPGCSFAASQKVVNAHFEVAHGQFSGTGYR 114          
BLAST of mRNA_L-elsbetiae_contig16506.4414.1 vs. uniprot
Match: A0A6A4G4W6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G4W6_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.470e-8
Identity = 22/55 (40.00%), Postives = 35/55 (63.64%), Query Frame = 0
Query:    2 CKPCEKEFTSESARQAHLQSHVPCPEKGCGFSALRKFVNNHHEAKHGQLSGSGFQ 56
            C+PC K F   S  +AH+++HV CP+  C F+A ++ V  HH+  HG+ +G G +
Sbjct:  487 CEPCAKSFAHASQHEAHMKTHVMCPD--CDFTASKRVVVVHHQTAHGEYAGEGLK 539          
BLAST of mRNA_L-elsbetiae_contig16506.4414.1 vs. uniprot
Match: A0A662WT44_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WT44_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 5.780e-7
Identity = 22/55 (40.00%), Postives = 34/55 (61.82%), Query Frame = 0
Query:    2 CKPCEKEFTSESARQAHLQSHVPCPEKGCGFSALRKFVNNHHEAKHGQLSGSGFQ 56
            C+ C K F   S  +AH+++HV CP+  C FSA ++ V  H ++ HG+ SG G +
Sbjct:  280 CETCVKSFAMASQYEAHMKTHVLCPD--CAFSASKRVVGAHFQSTHGEYSGQGLK 332          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16506.4414.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JLR5_9PHAE1.040e-2992.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK97_ECTSI3.940e-2990.91Zinc finger protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A7S2RYE8_9STRA1.940e-1657.14Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6A4G4W6_9STRA3.470e-840.00Uncharacterized protein n=2 Tax=Phytophthora rubi ... [more]
A0A662WT44_9STRA5.780e-740.00Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF12874zf-metcoord: 1..22
e-value: 2.9E-6
score: 27.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 2..22
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 1..22
score: 8.683

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16506contigL-elsbetiae_contig16506:2855..3022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16506.4414.1mRNA_L-elsbetiae_contig16506.4414.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16506 2855..3022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16506.4414.1 ID=prot_L-elsbetiae_contig16506.4414.1|Name=mRNA_L-elsbetiae_contig16506.4414.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=56bp
HCKPCEKEFTSESARQAHLQSHVPCPEKGCGFSALRKFVNNHHEAKHGQL
SGSGFQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type